RNA–Protein interactions for RNA: ENST00000629670.1

CCDC163-208, Transcript of coiled-coil domain containing 163, humanhuman

TSL 3

Gene CCDC163, Length 919 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163-208ENST00000629670 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.08■□□□□ 0.32
CCDC163-208ENST00000629670 ITGAEP38570 1179 aa17.06■□□□□ 0.32
CCDC163-208ENST00000629670 TET3O43151 1660 aa17.06■□□□□ 0.32
CCDC163-208ENST00000629670 FAM135BQ49AJ0 1406 aa17.04■□□□□ 0.32
CCDC163-208ENST00000629670 PLEKHG1Q9ULL1 1385 aa17.04■□□□□ 0.32
CCDC163-208ENST00000629670 RIMS2Q9UQ26 1411 aa17.04■□□□□ 0.32
CCDC163-208ENST00000629670 NKTRP30414 1462 aaKnown RBP17.03■□□□□ 0.32
CCDC163-208ENST00000629670 NUP155O75694 1391 aa17.02■□□□□ 0.32
CCDC163-208ENST00000629670 MSH6P52701 1360 aa17.02■□□□□ 0.32
CCDC163-208ENST00000629670 TBX22Q9Y458 520 aa17.02■□□□□ 0.32
CCDC163-208ENST00000629670 UNC13BO14795 1591 aa17.02■□□□□ 0.31
CCDC163-208ENST00000629670 RBM33Q96EV2 1170 aaKnown RBP17.01■□□□□ 0.31
CCDC163-208ENST00000629670 ZFYVE9O95405 1425 aa17.01■□□□□ 0.31
CCDC163-208ENST00000629670 GCC2Q8IWJ2 1684 aa17.01■□□□□ 0.31
CCDC163-208ENST00000629670 C14orf37Q86TY3 774 aa16.99■□□□□ 0.31
CCDC163-208ENST00000629670 PPARGC1BQ86YN6 1023 aaKnown RBP16.99■□□□□ 0.31
CCDC163-208ENST00000629670 XIRP1Q702N8 1843 aaKnown RBP16.98■□□□□ 0.31
CCDC163-208ENST00000629670 TMEM131LA2VDJ0 1609 aa16.97■□□□□ 0.31
CCDC163-208ENST00000629670 SLAIN2Q9P270 581 aa16.97■□□□□ 0.31
CCDC163-208ENST00000629670 NWD1Q149M9 1564 aa16.97■□□□□ 0.31
CCDC163-208ENST00000629670 NUTM2DQ5VT03 806 aaPredicted RBP16.96■□□□□ 0.31
CCDC163-208ENST00000629670 IQGAP3Q86VI3 1631 aa16.96■□□□□ 0.3
CCDC163-208ENST00000629670 NCOA3Q9Y6Q9 1424 aa16.95■□□□□ 0.3
CCDC163-208ENST00000629670 E9PCH4 1651 aa16.94■□□□□ 0.3
CCDC163-208ENST00000629670 PIK3R4Q99570 1358 aa16.94■□□□□ 0.3
CCDC163-208ENST00000629670 ATF3P18847 181 aa16.92■□□□□ 0.3
CCDC163-208ENST00000629670 ZNF326Q5BKZ1 582 aaKnown RBP16.92■□□□□ 0.3
CCDC163-208ENST00000629670 MYO5BQ9ULV0 1848 aa16.91■□□□□ 0.3
CCDC163-208ENST00000629670 ROBO1Q9Y6N7 1651 aa16.91■□□□□ 0.3
CCDC163-208ENST00000629670 CADPS2Q86UW7 1296 aa16.91■□□□□ 0.3
CCDC163-208ENST00000629670 C19orf44Q9H6X5 657 aa16.91■□□□□ 0.3
CCDC163-208ENST00000629670 DIP2AQ14689 1571 aa16.9■□□□□ 0.3
CCDC163-208ENST00000629670 CHD2O14647 1828 aaKnown RBP16.9■□□□□ 0.3
CCDC163-208ENST00000629670 ADAMTS13Q76LX8 1427 aa16.89■□□□□ 0.29
CCDC163-208ENST00000629670 AMOTL2Q9Y2J4 779 aa16.89■□□□□ 0.29
CCDC163-208ENST00000629670 JCADQ9P266 1359 aa16.88■□□□□ 0.29
CCDC163-208ENST00000629670 TRPM2O94759 1503 aa16.87■□□□□ 0.29
CCDC163-208ENST00000629670 RGS17Q9UGC6 210 aaPredicted RBP16.86■□□□□ 0.29
CCDC163-208ENST00000629670 TRIM52Q96A61 297 aa16.84■□□□□ 0.29
CCDC163-208ENST00000629670 RRBP1Q9P2E9 1410 aaKnown RBP16.84■□□□□ 0.29
CCDC163-208ENST00000629670 PHLPP1O60346 1717 aa16.82■□□□□ 0.28
CCDC163-208ENST00000629670 SPHKAPQ2M3C7 1700 aa16.82■□□□□ 0.28
CCDC163-208ENST00000629670 MEX3CQ5U5Q3 659 aaKnown RBP16.81■□□□□ 0.28
CCDC163-208ENST00000629670 NAIPQ13075 1403 aa16.8■□□□□ 0.28
CCDC163-208ENST00000629670 SPATA31A6Q5VVP1 1343 aa16.8■□□□□ 0.28
CCDC163-208ENST00000629670 POTEAQ6S8J7 498 aa16.8■□□□□ 0.28
CCDC163-208ENST00000629670 PTPRUQ92729 1446 aa16.79■□□□□ 0.28
CCDC163-208ENST00000629670 VGFO15240 615 aaPredicted RBP16.79■□□□□ 0.28
CCDC163-208ENST00000629670 SETBP1Q9Y6X0 1596 aa16.78■□□□□ 0.28
CCDC163-208ENST00000629670 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.78■□□□□ 0.28
CCDC163-208ENST00000629670 DCCP43146 1447 aa16.78■□□□□ 0.28
CCDC163-208ENST00000629670 BRINP3Q76B58 766 aa16.77■□□□□ 0.28
CCDC163-208ENST00000629670 SLC4A1APQ9BWU0 796 aaKnown RBP16.77■□□□□ 0.28
CCDC163-208ENST00000629670 METP08581 1390 aa16.76■□□□□ 0.27
CCDC163-208ENST00000629670 ZNF772Q68DY9 489 aaPredicted RBP16.75■□□□□ 0.27
CCDC163-208ENST00000629670 COL16A1Q07092 1604 aaPredicted RBP16.74■□□□□ 0.27
CCDC163-208ENST00000629670 RPGRIP1LQ68CZ1 1315 aa16.74■□□□□ 0.27
CCDC163-208ENST00000629670 HFM1A2PYH4 1435 aa16.74■□□□□ 0.27
CCDC163-208ENST00000629670 CLTCL1P53675 1640 aa16.74■□□□□ 0.27
CCDC163-208ENST00000629670 AHDC1Q5TGY3 1603 aaPredicted RBP16.74■□□□□ 0.27
CCDC163-208ENST00000629670 NEXMIFQ5QGS0 1516 aa16.72■□□□□ 0.27
CCDC163-208ENST00000629670 NRXN3Q9Y4C0 1643 aa16.72■□□□□ 0.27
CCDC163-208ENST00000629670 LRRC59Q96AG4 307 aaKnown RBP16.72■□□□□ 0.27
CCDC163-208ENST00000629670 XRN1Q8IZH2 1706 aaKnown RBP16.72■□□□□ 0.27
CCDC163-208ENST00000629670 KIF1BO60333 1816 aa16.71■□□□□ 0.27
CCDC163-208ENST00000629670 NUTM2BA6NNL0 878 aaPredicted RBP16.71■□□□□ 0.27
CCDC163-208ENST00000629670 NUTM2EB1AL46 878 aaPredicted RBP16.71■□□□□ 0.27
CCDC163-208ENST00000629670 NUTM2AQ8IVF1 878 aaPredicted RBP16.71■□□□□ 0.27
CCDC163-208ENST00000629670 ADGRL3Q9HAR2 1447 aa16.7■□□□□ 0.26
CCDC163-208ENST00000629670 MST1RQ04912 1400 aa16.7■□□□□ 0.26
CCDC163-208ENST00000629670 ASXL1Q8IXJ9 1541 aa16.68■□□□□ 0.26
CCDC163-208ENST00000629670 SHPRHQ149N8 1683 aa16.67■□□□□ 0.26
CCDC163-208ENST00000629670 SETD5Q9C0A6 1442 aa16.67■□□□□ 0.26
CCDC163-208ENST00000629670 LRP6O75581 1613 aa16.67■□□□□ 0.26
CCDC163-208ENST00000629670 PTCH1Q13635 1447 aa16.65■□□□□ 0.26
CCDC163-208ENST00000629670 RXRBP28702 533 aa16.65■□□□□ 0.26
CCDC163-208ENST00000629670 ACIN1Q9UKV3 1341 aaKnown RBP16.65■□□□□ 0.26
CCDC163-208ENST00000629670 CCDC144AA2RUR9 1427 aa16.63■□□□□ 0.25
CCDC163-208ENST00000629670 ROBO2Q9HCK4 1378 aa16.63■□□□□ 0.25
CCDC163-208ENST00000629670 FOXD1Q16676 465 aa16.62■□□□□ 0.25
CCDC163-208ENST00000629670 RGL3Q3MIN7 710 aa16.62■□□□□ 0.25
CCDC163-208ENST00000629670 C1orf167Q5SNV9 1468 aa16.61■□□□□ 0.25
CCDC163-208ENST00000629670 DDX17Q92841 729 aaKnown RBP16.61■□□□□ 0.25
CCDC163-208ENST00000629670 MPHOSPH9Q99550 1183 aa16.61■□□□□ 0.25
CCDC163-208ENST00000629670 AFF2P51816 1311 aa16.61■□□□□ 0.25
CCDC163-208ENST00000629670 C8orf37Q96NL8 207 aa16.6■□□□□ 0.25
CCDC163-208ENST00000629670 NHSL1Q5SYE7 1610 aa16.59■□□□□ 0.25
CCDC163-208ENST00000629670 NALCNQ8IZF0 1738 aa16.59■□□□□ 0.25
CCDC163-208ENST00000629670 ORAI2Q96SN7 254 aa16.59■□□□□ 0.25
CCDC163-208ENST00000629670 PNPLA6Q8IY17 1366 aa16.59■□□□□ 0.25
CCDC163-208ENST00000629670 ANKRD30BQ9BXX2 1392 aa16.59■□□□□ 0.25
CCDC163-208ENST00000629670 PRAG1Q86YV5 1406 aa16.59■□□□□ 0.25
CCDC163-208ENST00000629670 NGLY1Q96IV0 654 aa16.58■□□□□ 0.24
CCDC163-208ENST00000629670 STK26Q9P289 416 aa16.57■□□□□ 0.24
CCDC163-208ENST00000629670 SOS2Q07890 1332 aaPredicted RBP16.56■□□□□ 0.24
CCDC163-208ENST00000629670 ADGRF5Q8IZF2 1346 aa16.56■□□□□ 0.24
CCDC163-208ENST00000629670 ADAMTS2O95450 1211 aa16.56■□□□□ 0.24
CCDC163-208ENST00000629670 ESCO1Q5FWF5 840 aa16.56■□□□□ 0.24
CCDC163-208ENST00000629670 QTRT2Q9H974 415 aaKnown RBP16.56■□□□□ 0.24
CCDC163-208ENST00000629670 PPLO60437 1756 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms