RNA–Protein interactions for RNA: ENST00000629252.2

UBE3A-218, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5

Gene UBE3A, Length 1,112 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-218ENST00000629252 GCC2Q8IWJ2 1684 aa31.49■■■□□ 2.63
UBE3A-218ENST00000629252 RPRD2Q5VT52 1461 aaKnown RBP31.49■■■□□ 2.63
UBE3A-218ENST00000629252 CHGAP10645 457 aaKnown RBP31.47■■■□□ 2.63
UBE3A-218ENST00000629252 FAM135BQ49AJ0 1406 aa31.47■■■□□ 2.63
UBE3A-218ENST00000629252 ROBO1Q9Y6N7 1651 aa31.46■■■□□ 2.63
UBE3A-218ENST00000629252 NKTRP30414 1462 aaKnown RBP31.45■■■□□ 2.62
UBE3A-218ENST00000629252 NWD1Q149M9 1564 aa31.44■■■□□ 2.62
UBE3A-218ENST00000629252 RIMS2Q9UQ26 1411 aa31.43■■■□□ 2.62
UBE3A-218ENST00000629252 MSH6P52701 1360 aa31.42■■■□□ 2.62
UBE3A-218ENST00000629252 UNC13BO14795 1591 aa31.41■■■□□ 2.62
UBE3A-218ENST00000629252 ZFYVE9O95405 1425 aa31.41■■■□□ 2.62
UBE3A-218ENST00000629252 TMEM131LA2VDJ0 1609 aa31.39■■■□□ 2.62
UBE3A-218ENST00000629252 PLEKHG1Q9ULL1 1385 aa31.39■■■□□ 2.62
UBE3A-218ENST00000629252 HDGFP51858 240 aaKnown RBP31.38■■■□□ 2.61
UBE3A-218ENST00000629252 NUTM2DQ5VT03 806 aaPredicted RBP31.38■■■□□ 2.61
UBE3A-218ENST00000629252 RGS17Q9UGC6 210 aaPredicted RBP31.37■■■□□ 2.61
UBE3A-218ENST00000629252 E9PCH4 1651 aa31.36■■■□□ 2.61
UBE3A-218ENST00000629252 ITGAEP38570 1179 aa31.36■■■□□ 2.61
UBE3A-218ENST00000629252 CHD2O14647 1828 aaKnown RBP31.33■■■□□ 2.61
UBE3A-218ENST00000629252 C14orf37Q86TY3 774 aa31.32■■■□□ 2.6
UBE3A-218ENST00000629252 SLAIN2Q9P270 581 aa31.3■■■□□ 2.6
UBE3A-218ENST00000629252 PHLPP1O60346 1717 aa31.29■■■□□ 2.6
UBE3A-218ENST00000629252 IQGAP3Q86VI3 1631 aa31.29■■■□□ 2.6
UBE3A-218ENST00000629252 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.29■■■□□ 2.6
UBE3A-218ENST00000629252 PPARGC1BQ86YN6 1023 aaKnown RBP31.28■■■□□ 2.6
UBE3A-218ENST00000629252 ROCK1Q13464 1354 aa31.28■■■□□ 2.6
UBE3A-218ENST00000629252 NUP155O75694 1391 aa31.26■■■□□ 2.59
UBE3A-218ENST00000629252 TBX22Q9Y458 520 aa31.25■■■□□ 2.59
UBE3A-218ENST00000629252 POTEAQ6S8J7 498 aa31.22■■■□□ 2.59
UBE3A-218ENST00000629252 ADAMTS13Q76LX8 1427 aa31.22■■■□□ 2.59
UBE3A-218ENST00000629252 DIP2AQ14689 1571 aa31.2■■■□□ 2.58
UBE3A-218ENST00000629252 JCADQ9P266 1359 aa31.17■■■□□ 2.58
UBE3A-218ENST00000629252 TRPM2O94759 1503 aa31.15■■■□□ 2.58
UBE3A-218ENST00000629252 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.15■■■□□ 2.58
UBE3A-218ENST00000629252 ATF3P18847 181 aa31.14■■■□□ 2.58
UBE3A-218ENST00000629252 COL16A1Q07092 1604 aaPredicted RBP31.13■■■□□ 2.57
UBE3A-218ENST00000629252 NCOA3Q9Y6Q9 1424 aa31.13■■■□□ 2.57
UBE3A-218ENST00000629252 CADPS2Q86UW7 1296 aa31.12■■■□□ 2.57
UBE3A-218ENST00000629252 PIK3R4Q99570 1358 aa31.12■■■□□ 2.57
UBE3A-218ENST00000629252 ZNF326Q5BKZ1 582 aaKnown RBP31.11■■■□□ 2.57
UBE3A-218ENST00000629252 AMOTL2Q9Y2J4 779 aa31.11■■■□□ 2.57
UBE3A-218ENST00000629252 C19orf44Q9H6X5 657 aa31.1■■■□□ 2.57
UBE3A-218ENST00000629252 SPHKAPQ2M3C7 1700 aa31.1■■■□□ 2.57
UBE3A-218ENST00000629252 MEX3CQ5U5Q3 659 aaKnown RBP31.08■■■□□ 2.57
UBE3A-218ENST00000629252 PTPRUQ92729 1446 aa31.07■■■□□ 2.57
UBE3A-218ENST00000629252 SETD1AO15047 1707 aaKnown RBP31.06■■■□□ 2.56
UBE3A-218ENST00000629252 LRP6O75581 1613 aa31.02■■■□□ 2.56
UBE3A-218ENST00000629252 NRXN3Q9Y4C0 1643 aa31.02■■■□□ 2.56
UBE3A-218ENST00000629252 AHDC1Q5TGY3 1603 aaPredicted RBP31.02■■■□□ 2.56
UBE3A-218ENST00000629252 SPATA31A6Q5VVP1 1343 aa30.99■■■□□ 2.55
UBE3A-218ENST00000629252 SETBP1Q9Y6X0 1596 aa30.99■■■□□ 2.55
UBE3A-218ENST00000629252 XRN1Q8IZH2 1706 aaKnown RBP30.98■■■□□ 2.55
UBE3A-218ENST00000629252 BRINP3Q76B58 766 aa30.97■■■□□ 2.55
UBE3A-218ENST00000629252 SHPRHQ149N8 1683 aa30.96■■■□□ 2.55
UBE3A-218ENST00000629252 CLTCL1P53675 1640 aa30.95■■■□□ 2.55
UBE3A-218ENST00000629252 METP08581 1390 aa30.94■■■□□ 2.54
UBE3A-218ENST00000629252 NUTM2BA6NNL0 878 aaPredicted RBP30.94■■■□□ 2.54
UBE3A-218ENST00000629252 NUTM2EB1AL46 878 aaPredicted RBP30.94■■■□□ 2.54
UBE3A-218ENST00000629252 NUTM2AQ8IVF1 878 aaPredicted RBP30.94■■■□□ 2.54
UBE3A-218ENST00000629252 DCCP43146 1447 aa30.92■■■□□ 2.54
UBE3A-218ENST00000629252 ASXL1Q8IXJ9 1541 aa30.92■■■□□ 2.54
UBE3A-218ENST00000629252 TRIM52Q96A61 297 aa30.9■■■□□ 2.54
UBE3A-218ENST00000629252 NEXMIFQ5QGS0 1516 aa30.89■■■□□ 2.54
UBE3A-218ENST00000629252 ZNF772Q68DY9 489 aaPredicted RBP30.89■■■□□ 2.54
UBE3A-218ENST00000629252 KIF1BO60333 1816 aa30.89■■■□□ 2.53
UBE3A-218ENST00000629252 MST1RQ04912 1400 aa30.88■■■□□ 2.53
UBE3A-218ENST00000629252 NAIPQ13075 1403 aa30.84■■■□□ 2.53
UBE3A-218ENST00000629252 NALCNQ8IZF0 1738 aa30.84■■■□□ 2.53
UBE3A-218ENST00000629252 ADGRL3Q9HAR2 1447 aa30.83■■■□□ 2.53
UBE3A-218ENST00000629252 RRBP1Q9P2E9 1410 aaKnown RBP30.83■■■□□ 2.53
UBE3A-218ENST00000629252 DDX17Q92841 729 aaKnown RBP30.82■■■□□ 2.52
UBE3A-218ENST00000629252 NHSL1Q5SYE7 1610 aa30.82■■■□□ 2.52
UBE3A-218ENST00000629252 SETD5Q9C0A6 1442 aa30.78■■■□□ 2.52
UBE3A-218ENST00000629252 AFF2P51816 1311 aa30.76■■■□□ 2.52
UBE3A-218ENST00000629252 RXRBP28702 533 aa30.76■■■□□ 2.51
UBE3A-218ENST00000629252 LRRC59Q96AG4 307 aaKnown RBP30.76■■■□□ 2.51
UBE3A-218ENST00000629252 VGFO15240 615 aaPredicted RBP30.73■■■□□ 2.51
UBE3A-218ENST00000629252 SLC4A1APQ9BWU0 796 aaKnown RBP30.73■■■□□ 2.51
UBE3A-218ENST00000629252 C8orf37Q96NL8 207 aa30.72■■■□□ 2.51
UBE3A-218ENST00000629252 C1orf167Q5SNV9 1468 aa30.7■■■□□ 2.5
UBE3A-218ENST00000629252 PNPLA6Q8IY17 1366 aa30.69■■■□□ 2.5
UBE3A-218ENST00000629252 HFM1A2PYH4 1435 aa30.69■■■□□ 2.5
UBE3A-218ENST00000629252 ROBO2Q9HCK4 1378 aa30.68■■■□□ 2.5
UBE3A-218ENST00000629252 PTCH1Q13635 1447 aa30.68■■■□□ 2.5
UBE3A-218ENST00000629252 UPF1Q92900 1129 aaKnown RBP eCLIP30.68■■■□□ 2.5
UBE3A-218ENST00000629252 ADAMTS2O95450 1211 aa30.65■■■□□ 2.5
UBE3A-218ENST00000629252 PPLO60437 1756 aa30.64■■■□□ 2.5
UBE3A-218ENST00000629252 ORAI2Q96SN7 254 aa30.64■■■□□ 2.5
UBE3A-218ENST00000629252 FOXD1Q16676 465 aa30.63■■■□□ 2.49
UBE3A-218ENST00000629252 RPGRIP1LQ68CZ1 1315 aa30.62■■■□□ 2.49
UBE3A-218ENST00000629252 QTRT2Q9H974 415 aaKnown RBP30.6■■■□□ 2.49
UBE3A-218ENST00000629252 CDK12Q9NYV4 1490 aaPredicted RBP30.6■■■□□ 2.49
UBE3A-218ENST00000629252 NGLY1Q96IV0 654 aa30.59■■■□□ 2.49
UBE3A-218ENST00000629252 RGS12O14924 1447 aa30.56■■■□□ 2.48
UBE3A-218ENST00000629252 RBM6P78332 1123 aaKnown RBP30.54■■■□□ 2.48
UBE3A-218ENST00000629252 RGL3Q3MIN7 710 aa30.54■■■□□ 2.48
UBE3A-218ENST00000629252 LAMC1P11047 1609 aa30.54■■■□□ 2.48
UBE3A-218ENST00000629252 SOS2Q07890 1332 aaPredicted RBP30.53■■■□□ 2.48
UBE3A-218ENST00000629252 STK26Q9P289 416 aa30.53■■■□□ 2.48
UBE3A-218ENST00000629252 CCDC144AA2RUR9 1427 aa30.52■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms