RNA–Protein interactions for RNA: ENST00000629036.2

DDX41-219, Transcript of DEAD-box helicase 41, humanhuman

TSL 4 BASIC

Gene DDX41, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-219ENST00000629036 KIF1BO60333 1816 aa16.77■□□□□ 0.28
DDX41-219ENST00000629036 NPHP4O75161 1426 aaPredicted RBP16.77■□□□□ 0.27
DDX41-219ENST00000629036 CPS1P31327 1500 aa16.75■□□□□ 0.27
DDX41-219ENST00000629036 LTKP29376 864 aa16.75■□□□□ 0.27
DDX41-219ENST00000629036 SLC52A1Q9NWF4 448 aa16.75■□□□□ 0.27
DDX41-219ENST00000629036 RAB3GAP2Q9H2M9 1393 aa16.74■□□□□ 0.27
DDX41-219ENST00000629036 XIRP1Q702N8 1843 aaKnown RBP16.73■□□□□ 0.27
DDX41-219ENST00000629036 NRXN3Q9Y4C0 1643 aa16.73■□□□□ 0.27
DDX41-219ENST00000629036 ALKQ9UM73 1620 aa16.72■□□□□ 0.27
DDX41-219ENST00000629036 IFT172Q9UG01 1749 aa16.72■□□□□ 0.27
DDX41-219ENST00000629036 NEXMIFQ5QGS0 1516 aa16.71■□□□□ 0.27
DDX41-219ENST00000629036 ANKLE2Q86XL3 938 aa16.71■□□□□ 0.27
DDX41-219ENST00000629036 PPLO60437 1756 aa16.7■□□□□ 0.26
DDX41-219ENST00000629036 NWD1Q149M9 1564 aa16.69■□□□□ 0.26
DDX41-219ENST00000629036 RIMS2Q9UQ26 1411 aa16.69■□□□□ 0.26
DDX41-219ENST00000629036 CHD2O14647 1828 aaKnown RBP16.68■□□□□ 0.26
DDX41-219ENST00000629036 SETD1AO15047 1707 aaKnown RBP16.68■□□□□ 0.26
DDX41-219ENST00000629036 SETBP1Q9Y6X0 1596 aa16.65■□□□□ 0.26
DDX41-219ENST00000629036 TRIM52Q96A61 297 aa16.65■□□□□ 0.26
DDX41-219ENST00000629036 SLC4A1APQ9BWU0 796 aaKnown RBP16.65■□□□□ 0.26
DDX41-219ENST00000629036 PLEKHG1Q9ULL1 1385 aa16.64■□□□□ 0.26
DDX41-219ENST00000629036 DIP2AQ14689 1571 aa16.64■□□□□ 0.25
DDX41-219ENST00000629036 TXNDC2Q86VQ3 553 aa16.64■□□□□ 0.25
DDX41-219ENST00000629036 ADAMTS13Q76LX8 1427 aa16.63■□□□□ 0.25
DDX41-219ENST00000629036 FOXD1Q16676 465 aa16.63■□□□□ 0.25
DDX41-219ENST00000629036 MPHOSPH9Q99550 1183 aa16.63■□□□□ 0.25
DDX41-219ENST00000629036 SPATA31E1Q6ZUB1 1445 aa16.62■□□□□ 0.25
DDX41-219ENST00000629036 RGS17Q9UGC6 210 aaPredicted RBP16.62■□□□□ 0.25
DDX41-219ENST00000629036 STAG3Q9UJ98 1225 aa16.61■□□□□ 0.25
DDX41-219ENST00000629036 XRN1Q8IZH2 1706 aaKnown RBP16.61■□□□□ 0.25
DDX41-219ENST00000629036 LRRC7Q96NW7 1537 aa16.6■□□□□ 0.25
DDX41-219ENST00000629036 HRCP23327 699 aa16.6■□□□□ 0.25
DDX41-219ENST00000629036 EID1Q9Y6B2 187 aa16.59■□□□□ 0.25
DDX41-219ENST00000629036 ACIN1Q9UKV3 1341 aaKnown RBP16.59■□□□□ 0.25
DDX41-219ENST00000629036 NKTRP30414 1462 aaKnown RBP16.56■□□□□ 0.24
DDX41-219ENST00000629036 CCDC144AA2RUR9 1427 aa16.56■□□□□ 0.24
DDX41-219ENST00000629036 ANKRD30BQ9BXX2 1392 aa16.55■□□□□ 0.24
DDX41-219ENST00000629036 CHGAP10645 457 aaKnown RBP16.54■□□□□ 0.24
DDX41-219ENST00000629036 NUTM2DQ5VT03 806 aaPredicted RBP16.53■□□□□ 0.24
DDX41-219ENST00000629036 POTEAQ6S8J7 498 aa16.53■□□□□ 0.24
DDX41-219ENST00000629036 SLC26A8Q96RN1 970 aa16.53■□□□□ 0.24
DDX41-219ENST00000629036 PTPRUQ92729 1446 aa16.53■□□□□ 0.24
DDX41-219ENST00000629036 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.52■□□□□ 0.24
DDX41-219ENST00000629036 ASXL1Q8IXJ9 1541 aa16.51■□□□□ 0.23
DDX41-219ENST00000629036 NRXN1Q9ULB1 1477 aa16.5■□□□□ 0.23
DDX41-219ENST00000629036 PIK3R4Q99570 1358 aa16.5■□□□□ 0.23
DDX41-219ENST00000629036 TBX22Q9Y458 520 aa16.49■□□□□ 0.23
DDX41-219ENST00000629036 PRAG1Q86YV5 1406 aa16.48■□□□□ 0.23
DDX41-219ENST00000629036 MYOM2P54296 1465 aa16.48■□□□□ 0.23
DDX41-219ENST00000629036 PPP1R15AO75807 674 aaPredicted RBP16.47■□□□□ 0.23
DDX41-219ENST00000629036 KCNA6P17658 529 aa16.47■□□□□ 0.23
DDX41-219ENST00000629036 METP08581 1390 aa16.47■□□□□ 0.23
DDX41-219ENST00000629036 KNDC1Q76NI1 1749 aa16.47■□□□□ 0.23
DDX41-219ENST00000629036 RPGRIP1LQ68CZ1 1315 aa16.46■□□□□ 0.23
DDX41-219ENST00000629036 PIK3C2GO75747 1445 aa16.46■□□□□ 0.23
DDX41-219ENST00000629036 NALCNQ8IZF0 1738 aa16.46■□□□□ 0.23
DDX41-219ENST00000629036 HDGFP51858 240 aaKnown RBP16.46■□□□□ 0.23
DDX41-219ENST00000629036 LAMC1P11047 1609 aa16.45■□□□□ 0.22
DDX41-219ENST00000629036 ZNF326Q5BKZ1 582 aaKnown RBP16.45■□□□□ 0.22
DDX41-219ENST00000629036 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.45■□□□□ 0.22
DDX41-219ENST00000629036 TMEM94Q12767 1356 aa16.44■□□□□ 0.22
DDX41-219ENST00000629036 ROBO1Q9Y6N7 1651 aa16.43■□□□□ 0.22
DDX41-219ENST00000629036 ADGRF5Q8IZF2 1346 aa16.43■□□□□ 0.22
DDX41-219ENST00000629036 DHX57Q6P158 1386 aaKnown RBP16.4■□□□□ 0.22
DDX41-219ENST00000629036 PTCH1Q13635 1447 aa16.39■□□□□ 0.21
DDX41-219ENST00000629036 NCOA3Q9Y6Q9 1424 aa16.39■□□□□ 0.21
DDX41-219ENST00000629036 VGFO15240 615 aaPredicted RBP16.39■□□□□ 0.21
DDX41-219ENST00000629036 TRIM26Q12899 539 aaPredicted RBP16.39■□□□□ 0.21
DDX41-219ENST00000629036 ADGRB1O14514 1584 aa16.38■□□□□ 0.21
DDX41-219ENST00000629036 TECPR2O15040 1411 aa16.37■□□□□ 0.21
DDX41-219ENST00000629036 PHLPP1O60346 1717 aa16.37■□□□□ 0.21
DDX41-219ENST00000629036 RGL3Q3MIN7 710 aa16.37■□□□□ 0.21
DDX41-219ENST00000629036 RBM33Q96EV2 1170 aaKnown RBP16.36■□□□□ 0.21
DDX41-219ENST00000629036 BCANQ96GW7 911 aa16.36■□□□□ 0.21
DDX41-219ENST00000629036 KIAA1210Q9ULL0 1709 aa16.36■□□□□ 0.21
DDX41-219ENST00000629036 FAM135BQ49AJ0 1406 aa16.36■□□□□ 0.21
DDX41-219ENST00000629036 AMOTL2Q9Y2J4 779 aa16.35■□□□□ 0.21
DDX41-219ENST00000629036 PROSER2Q86WR7 435 aaPredicted RBP16.34■□□□□ 0.21
DDX41-219ENST00000629036 ROBO2Q9HCK4 1378 aa16.34■□□□□ 0.21
DDX41-219ENST00000629036 ADGRL3Q9HAR2 1447 aa16.33■□□□□ 0.2
DDX41-219ENST00000629036 DCCP43146 1447 aa16.32■□□□□ 0.2
DDX41-219ENST00000629036 ARHGEF28Q8N1W1 1705 aaKnown RBP16.31■□□□□ 0.2
DDX41-219ENST00000629036 CDC42BPGQ6DT37 1551 aa16.3■□□□□ 0.2
DDX41-219ENST00000629036 LRPPRCP42704 1394 aaKnown RBP16.3■□□□□ 0.2
DDX41-219ENST00000629036 UPF1Q92900 1129 aaKnown RBP eCLIP16.3■□□□□ 0.2
DDX41-219ENST00000629036 YTHDC2Q9H6S0 1430 aaKnown RBP16.29■□□□□ 0.2
DDX41-219ENST00000629036 MSH6P52701 1360 aa16.29■□□□□ 0.2
DDX41-219ENST00000629036 C14orf93Q9H972 538 aaKnown RBP16.29■□□□□ 0.2
DDX41-219ENST00000629036 NHSL1Q5SYE7 1610 aa16.29■□□□□ 0.2
DDX41-219ENST00000629036 DLC1Q96QB1 1528 aa16.29■□□□□ 0.2
DDX41-219ENST00000629036 FMN2Q9NZ56 1722 aa16.28■□□□□ 0.2
DDX41-219ENST00000629036 MST1RQ04912 1400 aa16.28■□□□□ 0.2
DDX41-219ENST00000629036 ABCC11Q96J66 1382 aa16.27■□□□□ 0.2
DDX41-219ENST00000629036 COL16A1Q07092 1604 aaPredicted RBP16.27■□□□□ 0.2
DDX41-219ENST00000629036 TRPM1Q7Z4N2 1603 aa16.27■□□□□ 0.2
DDX41-219ENST00000629036 AHDC1Q5TGY3 1603 aaPredicted RBP16.27■□□□□ 0.19
DDX41-219ENST00000629036 ADGRB2O60241 1585 aa16.26■□□□□ 0.19
DDX41-219ENST00000629036 CFAP70Q5T0N1 1121 aa16.25■□□□□ 0.19
DDX41-219ENST00000629036 PLEKHH1Q9ULM0 1364 aa16.25■□□□□ 0.19
DDX41-219ENST00000629036 RGPD8O14715 1765 aaPredicted RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms