RNA–Protein interactions for RNA: ENST00000628397.2

CCDC163-205, Transcript of coiled-coil domain containing 163, humanhuman

TSL 3

Gene CCDC163, Length 885 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163-205ENST00000628397 DCAF11Q8TEB1 546 aa17.58■□□□□ 0.4
CCDC163-205ENST00000628397 MYOM2P54296 1465 aa17.57■□□□□ 0.4
CCDC163-205ENST00000628397 RPGRIP1LQ68CZ1 1315 aa17.57■□□□□ 0.4
CCDC163-205ENST00000628397 RIMS2Q9UQ26 1411 aa17.56■□□□□ 0.4
CCDC163-205ENST00000628397 THEMISQ8N1K5 641 aaPredicted RBP17.56■□□□□ 0.4
CCDC163-205ENST00000628397 KDM2AQ9Y2K7 1162 aa17.56■□□□□ 0.4
CCDC163-205ENST00000628397 SLIT1O75093 1534 aa17.56■□□□□ 0.4
CCDC163-205ENST00000628397 TMEM2Q9UHN6 1383 aa17.55■□□□□ 0.4
CCDC163-205ENST00000628397 ZFYVE9O95405 1425 aa17.55■□□□□ 0.4
CCDC163-205ENST00000628397 POLR1AO95602 1720 aaPredicted RBP17.54■□□□□ 0.4
CCDC163-205ENST00000628397 ARHGAP23Q9P227 1491 aa17.54■□□□□ 0.4
CCDC163-205ENST00000628397 LMTK3Q96Q04 1460 aa17.52■□□□□ 0.4
CCDC163-205ENST00000628397 HDGFP51858 240 aaKnown RBP17.52■□□□□ 0.4
CCDC163-205ENST00000628397 STAC3Q96MF2 364 aa17.52■□□□□ 0.4
CCDC163-205ENST00000628397 PPP1R15AO75807 674 aaPredicted RBP17.51■□□□□ 0.39
CCDC163-205ENST00000628397 NUTM2DQ5VT03 806 aaPredicted RBP17.51■□□□□ 0.39
CCDC163-205ENST00000628397 PRAG1Q86YV5 1406 aa17.51■□□□□ 0.39
CCDC163-205ENST00000628397 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.51■□□□□ 0.39
CCDC163-205ENST00000628397 LAMC1P11047 1609 aa17.5■□□□□ 0.39
CCDC163-205ENST00000628397 SCAF11Q99590 1463 aaKnown RBP17.5■□□□□ 0.39
CCDC163-205ENST00000628397 VGFO15240 615 aaPredicted RBP17.5■□□□□ 0.39
CCDC163-205ENST00000628397 EID1Q9Y6B2 187 aa17.5■□□□□ 0.39
CCDC163-205ENST00000628397 TRPM1Q7Z4N2 1603 aa17.5■□□□□ 0.39
CCDC163-205ENST00000628397 NRXN1Q9ULB1 1477 aa17.5■□□□□ 0.39
CCDC163-205ENST00000628397 KIAA1210Q9ULL0 1709 aa17.49■□□□□ 0.39
CCDC163-205ENST00000628397 IQGAP1P46940 1657 aa17.48■□□□□ 0.39
CCDC163-205ENST00000628397 ADGRF5Q8IZF2 1346 aa17.48■□□□□ 0.39
CCDC163-205ENST00000628397 PIK3C2GO75747 1445 aa17.47■□□□□ 0.39
CCDC163-205ENST00000628397 TXNDC2Q86VQ3 553 aa17.47■□□□□ 0.39
CCDC163-205ENST00000628397 SETBP1Q9Y6X0 1596 aa17.45■□□□□ 0.38
CCDC163-205ENST00000628397 ANKLE2Q86XL3 938 aa17.45■□□□□ 0.38
CCDC163-205ENST00000628397 NRXN3Q9Y4C0 1643 aa17.45■□□□□ 0.38
CCDC163-205ENST00000628397 RALGAPBQ86X10 1494 aa17.44■□□□□ 0.38
CCDC163-205ENST00000628397 PLEKHG1Q9ULL1 1385 aa17.44■□□□□ 0.38
CCDC163-205ENST00000628397 LTKP29376 864 aa17.44■□□□□ 0.38
CCDC163-205ENST00000628397 NBPF8Q3BBV2 869 aa17.44■□□□□ 0.38
CCDC163-205ENST00000628397 HSPA2P54652 639 aa17.43■□□□□ 0.38
CCDC163-205ENST00000628397 BCANQ96GW7 911 aa17.43■□□□□ 0.38
CCDC163-205ENST00000628397 SETD1AO15047 1707 aaKnown RBP17.43■□□□□ 0.38
CCDC163-205ENST00000628397 ALKQ9UM73 1620 aa17.42■□□□□ 0.38
CCDC163-205ENST00000628397 DIP2AQ14689 1571 aa17.41■□□□□ 0.38
CCDC163-205ENST00000628397 STRCQ7RTU9 1775 aa17.4■□□□□ 0.38
CCDC163-205ENST00000628397 ROCK2O75116 1388 aaKnown RBP17.4■□□□□ 0.38
CCDC163-205ENST00000628397 NPHP4O75161 1426 aaPredicted RBP17.39■□□□□ 0.38
CCDC163-205ENST00000628397 MED14O60244 1454 aa17.39■□□□□ 0.37
CCDC163-205ENST00000628397 CFAP70Q5T0N1 1121 aa17.38■□□□□ 0.37
CCDC163-205ENST00000628397 NCKAP5LQ9HCH0 1330 aa17.38■□□□□ 0.37
CCDC163-205ENST00000628397 C14orf93Q9H972 538 aaKnown RBP17.37■□□□□ 0.37
CCDC163-205ENST00000628397 ADAMTS13Q76LX8 1427 aa17.37■□□□□ 0.37
CCDC163-205ENST00000628397 ASXL1Q8IXJ9 1541 aa17.37■□□□□ 0.37
CCDC163-205ENST00000628397 ADGRB1O14514 1584 aa17.36■□□□□ 0.37
CCDC163-205ENST00000628397 NBPF1Q3BBV0 1214 aa17.34■□□□□ 0.37
CCDC163-205ENST00000628397 GPRASP1Q5JY77 1395 aa17.34■□□□□ 0.37
CCDC163-205ENST00000628397 SLC26A8Q96RN1 970 aa17.33■□□□□ 0.36
CCDC163-205ENST00000628397 CARD11Q9BXL7 1154 aa17.33■□□□□ 0.36
CCDC163-205ENST00000628397 KNDC1Q76NI1 1749 aa17.33■□□□□ 0.36
CCDC163-205ENST00000628397 ARHGEF28Q8N1W1 1705 aaKnown RBP17.3■□□□□ 0.36
CCDC163-205ENST00000628397 TMEM132EQ6IEE7 984 aa17.3■□□□□ 0.36
CCDC163-205ENST00000628397 TBX22Q9Y458 520 aa17.3■□□□□ 0.36
CCDC163-205ENST00000628397 YTHDC2Q9H6S0 1430 aaKnown RBP17.3■□□□□ 0.36
CCDC163-205ENST00000628397 METP08581 1390 aa17.29■□□□□ 0.36
CCDC163-205ENST00000628397 CHD2O14647 1828 aaKnown RBP17.29■□□□□ 0.36
CCDC163-205ENST00000628397 USP47Q96K76 1375 aa17.28■□□□□ 0.36
CCDC163-205ENST00000628397 XRN1Q8IZH2 1706 aaKnown RBP17.28■□□□□ 0.36
CCDC163-205ENST00000628397 EIF3AQ14152 1382 aaKnown RBP17.28■□□□□ 0.36
CCDC163-205ENST00000628397 PIK3R4Q99570 1358 aa17.28■□□□□ 0.36
CCDC163-205ENST00000628397 LRPPRCP42704 1394 aaKnown RBP17.27■□□□□ 0.35
CCDC163-205ENST00000628397 CPS1P31327 1500 aa17.26■□□□□ 0.35
CCDC163-205ENST00000628397 STK26Q9P289 416 aa17.26■□□□□ 0.35
CCDC163-205ENST00000628397 NWD1Q149M9 1564 aa17.26■□□□□ 0.35
CCDC163-205ENST00000628397 EIF4G2P78344 907 aaKnown RBP eCLIP17.25■□□□□ 0.35
CCDC163-205ENST00000628397 DLC1Q96QB1 1528 aa17.25■□□□□ 0.35
CCDC163-205ENST00000628397 PTPRUQ92729 1446 aa17.24■□□□□ 0.35
CCDC163-205ENST00000628397 QRICH2Q9H0J4 1663 aa17.24■□□□□ 0.35
CCDC163-205ENST00000628397 TRAK1Q9UPV9 953 aa17.24■□□□□ 0.35
CCDC163-205ENST00000628397 DMRT2Q9Y5R5 561 aa17.24■□□□□ 0.35
CCDC163-205ENST00000628397 TECPR2O15040 1411 aa17.23■□□□□ 0.35
CCDC163-205ENST00000628397 ABCC11Q96J66 1382 aa17.22■□□□□ 0.35
CCDC163-205ENST00000628397 HSPA5P11021 654 aaKnown RBP17.21■□□□□ 0.35
CCDC163-205ENST00000628397 PTCH1Q13635 1447 aa17.21■□□□□ 0.34
CCDC163-205ENST00000628397 AMOTL2Q9Y2J4 779 aa17.2■□□□□ 0.34
CCDC163-205ENST00000628397 STRCP1A6NGW2 1772 aa17.2■□□□□ 0.34
CCDC163-205ENST00000628397 NKTRP30414 1462 aaKnown RBP17.19■□□□□ 0.34
CCDC163-205ENST00000628397 CENPJQ9HC77 1338 aaPredicted RBP17.19■□□□□ 0.34
CCDC163-205ENST00000628397 KCNA6P17658 529 aa17.18■□□□□ 0.34
CCDC163-205ENST00000628397 FAM135BQ49AJ0 1406 aa17.18■□□□□ 0.34
CCDC163-205ENST00000628397 ROBO2Q9HCK4 1378 aa17.17■□□□□ 0.34
CCDC163-205ENST00000628397 ST20-MTHFSA0A0A6YYL1 179 aa17.17■□□□□ 0.34
CCDC163-205ENST00000628397 POGKQ9P215 609 aa17.17■□□□□ 0.34
CCDC163-205ENST00000628397 PRAM1Q96QH2 718 aa17.16■□□□□ 0.34
CCDC163-205ENST00000628397 HIRIP3Q9BW71 556 aaPredicted RBP17.16■□□□□ 0.34
CCDC163-205ENST00000628397 SIRT1Q96EB6 747 aa17.15■□□□□ 0.34
CCDC163-205ENST00000628397 SAFB2Q14151 953 aaKnown RBP eCLIP17.14■□□□□ 0.33
CCDC163-205ENST00000628397 PLEKHH1Q9ULM0 1364 aa17.14■□□□□ 0.33
CCDC163-205ENST00000628397 NALCNQ8IZF0 1738 aa17.13■□□□□ 0.33
CCDC163-205ENST00000628397 WAPLQ7Z5K2 1190 aa17.13■□□□□ 0.33
CCDC163-205ENST00000628397 ZNF335Q9H4Z2 1342 aaPredicted RBP17.13■□□□□ 0.33
CCDC163-205ENST00000628397 SBNO2Q9Y2G9 1366 aa17.13■□□□□ 0.33
CCDC163-205ENST00000628397 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.13■□□□□ 0.33
CCDC163-205ENST00000628397 ADGRB2O60241 1585 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms