RNA–Protein interactions for RNA: ENST00000628293.1

CCDC163-204, Transcript of coiled-coil domain containing 163, humanhuman

TSL 1 (best)

Gene CCDC163, Length 1,076 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163-204ENST00000628293 DMRT2Q9Y5R5 561 aa11.77□□□□□ -0.53
CCDC163-204ENST00000628293 ANKLE2Q86XL3 938 aa11.76□□□□□ -0.53
CCDC163-204ENST00000628293 MPHOSPH9Q99550 1183 aa11.76□□□□□ -0.53
CCDC163-204ENST00000628293 IFT172Q9UG01 1749 aa11.76□□□□□ -0.53
CCDC163-204ENST00000628293 NEXMIFQ5QGS0 1516 aa11.76□□□□□ -0.53
CCDC163-204ENST00000628293 NRXN3Q9Y4C0 1643 aa11.75□□□□□ -0.53
CCDC163-204ENST00000628293 PPLO60437 1756 aa11.75□□□□□ -0.53
CCDC163-204ENST00000628293 RIMS2Q9UQ26 1411 aa11.75□□□□□ -0.53
CCDC163-204ENST00000628293 HRCP23327 699 aa11.74□□□□□ -0.53
CCDC163-204ENST00000628293 STAG3Q9UJ98 1225 aa11.73□□□□□ -0.53
CCDC163-204ENST00000628293 ACIN1Q9UKV3 1341 aaKnown RBP11.73□□□□□ -0.53
CCDC163-204ENST00000628293 XIRP1Q702N8 1843 aaKnown RBP11.72□□□□□ -0.53
CCDC163-204ENST00000628293 ZNF335Q9H4Z2 1342 aaPredicted RBP11.72□□□□□ -0.53
CCDC163-204ENST00000628293 TXNDC2Q86VQ3 553 aa11.72□□□□□ -0.53
CCDC163-204ENST00000628293 SETD1AO15047 1707 aaKnown RBP11.72□□□□□ -0.53
CCDC163-204ENST00000628293 SPATA31E1Q6ZUB1 1445 aa11.71□□□□□ -0.53
CCDC163-204ENST00000628293 CHD2O14647 1828 aaKnown RBP11.71□□□□□ -0.54
CCDC163-204ENST00000628293 NWD1Q149M9 1564 aa11.71□□□□□ -0.54
CCDC163-204ENST00000628293 PLEKHG1Q9ULL1 1385 aa11.7□□□□□ -0.54
CCDC163-204ENST00000628293 DIP2AQ14689 1571 aa11.7□□□□□ -0.54
CCDC163-204ENST00000628293 SETBP1Q9Y6X0 1596 aa11.7□□□□□ -0.54
CCDC163-204ENST00000628293 ADAMTS13Q76LX8 1427 aa11.69□□□□□ -0.54
CCDC163-204ENST00000628293 CHGAP10645 457 aaKnown RBP11.69□□□□□ -0.54
CCDC163-204ENST00000628293 EID1Q9Y6B2 187 aa11.69□□□□□ -0.54
CCDC163-204ENST00000628293 CPS1P31327 1500 aa11.69□□□□□ -0.54
CCDC163-204ENST00000628293 CCDC144AA2RUR9 1427 aa11.69□□□□□ -0.54
CCDC163-204ENST00000628293 ANKRD30BQ9BXX2 1392 aa11.68□□□□□ -0.54
CCDC163-204ENST00000628293 TRIM26Q12899 539 aaPredicted RBP11.67□□□□□ -0.54
CCDC163-204ENST00000628293 IQSEC2Q5JU85 1478 aa11.67□□□□□ -0.54
CCDC163-204ENST00000628293 XRN1Q8IZH2 1706 aaKnown RBP11.66□□□□□ -0.54
CCDC163-204ENST00000628293 NUTM2DQ5VT03 806 aaPredicted RBP11.66□□□□□ -0.54
CCDC163-204ENST00000628293 CERKQ8TCT0 537 aa11.66□□□□□ -0.54
CCDC163-204ENST00000628293 LRRC7Q96NW7 1537 aa11.65□□□□□ -0.55
CCDC163-204ENST00000628293 ALKQ9UM73 1620 aa11.64□□□□□ -0.55
CCDC163-204ENST00000628293 ILDR2Q71H61 639 aa11.64□□□□□ -0.55
CCDC163-204ENST00000628293 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.64□□□□□ -0.55
CCDC163-204ENST00000628293 SLC26A8Q96RN1 970 aa11.64□□□□□ -0.55
CCDC163-204ENST00000628293 ZNF326Q5BKZ1 582 aaKnown RBP11.63□□□□□ -0.55
CCDC163-204ENST00000628293 NKTRP30414 1462 aaKnown RBP11.63□□□□□ -0.55
CCDC163-204ENST00000628293 PPP1R15AO75807 674 aaPredicted RBP11.62□□□□□ -0.55
CCDC163-204ENST00000628293 DISP3Q9P2K9 1392 aa11.62□□□□□ -0.55
CCDC163-204ENST00000628293 PTPRUQ92729 1446 aa11.61□□□□□ -0.55
CCDC163-204ENST00000628293 ASXL1Q8IXJ9 1541 aa11.61□□□□□ -0.55
CCDC163-204ENST00000628293 HDGFP51858 240 aaKnown RBP11.61□□□□□ -0.55
CCDC163-204ENST00000628293 MYOM2P54296 1465 aa11.61□□□□□ -0.55
CCDC163-204ENST00000628293 NRXN1Q9ULB1 1477 aa11.61□□□□□ -0.55
CCDC163-204ENST00000628293 RPGRIP1LQ68CZ1 1315 aa11.6□□□□□ -0.55
CCDC163-204ENST00000628293 DHX57Q6P158 1386 aaKnown RBP11.6□□□□□ -0.55
CCDC163-204ENST00000628293 TBX22Q9Y458 520 aa11.6□□□□□ -0.55
CCDC163-204ENST00000628293 PIK3C2GO75747 1445 aa11.6□□□□□ -0.55
CCDC163-204ENST00000628293 PIK3R4Q99570 1358 aa11.59□□□□□ -0.55
CCDC163-204ENST00000628293 KNDC1Q76NI1 1749 aa11.58□□□□□ -0.56
CCDC163-204ENST00000628293 METP08581 1390 aa11.58□□□□□ -0.56
CCDC163-204ENST00000628293 LAMC1P11047 1609 aa11.58□□□□□ -0.56
CCDC163-204ENST00000628293 KCNA6P17658 529 aa11.58□□□□□ -0.56
CCDC163-204ENST00000628293 RGL3Q3MIN7 710 aa11.58□□□□□ -0.56
CCDC163-204ENST00000628293 ADGRF5Q8IZF2 1346 aa11.58□□□□□ -0.56
CCDC163-204ENST00000628293 PRAG1Q86YV5 1406 aa11.57□□□□□ -0.56
CCDC163-204ENST00000628293 VGFO15240 615 aaPredicted RBP11.56□□□□□ -0.56
CCDC163-204ENST00000628293 NALCNQ8IZF0 1738 aa11.56□□□□□ -0.56
CCDC163-204ENST00000628293 BCANQ96GW7 911 aa11.56□□□□□ -0.56
CCDC163-204ENST00000628293 TMEM94Q12767 1356 aa11.55□□□□□ -0.56
CCDC163-204ENST00000628293 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.55□□□□□ -0.56
CCDC163-204ENST00000628293 ADGRB1O14514 1584 aa11.53□□□□□ -0.56
CCDC163-204ENST00000628293 PTCH1Q13635 1447 aa11.52□□□□□ -0.56
CCDC163-204ENST00000628293 KIAA1210Q9ULL0 1709 aa11.52□□□□□ -0.56
CCDC163-204ENST00000628293 RBM33Q96EV2 1170 aaKnown RBP11.52□□□□□ -0.57
CCDC163-204ENST00000628293 TECPR2O15040 1411 aa11.52□□□□□ -0.57
CCDC163-204ENST00000628293 AMOTL2Q9Y2J4 779 aa11.51□□□□□ -0.57
CCDC163-204ENST00000628293 NCOA3Q9Y6Q9 1424 aa11.51□□□□□ -0.57
CCDC163-204ENST00000628293 PROSER2Q86WR7 435 aaPredicted RBP11.5□□□□□ -0.57
CCDC163-204ENST00000628293 SIN3AQ96ST3 1273 aa11.5□□□□□ -0.57
CCDC163-204ENST00000628293 ROBO2Q9HCK4 1378 aa11.5□□□□□ -0.57
CCDC163-204ENST00000628293 UBAP1LF5GYI3 381 aa11.49□□□□□ -0.57
CCDC163-204ENST00000628293 PCGF6Q9BYE7 350 aa11.49□□□□□ -0.57
CCDC163-204ENST00000628293 C14orf93Q9H972 538 aaKnown RBP11.49□□□□□ -0.57
CCDC163-204ENST00000628293 ROBO1Q9Y6N7 1651 aa11.49□□□□□ -0.57
CCDC163-204ENST00000628293 ARHGEF28Q8N1W1 1705 aaKnown RBP11.49□□□□□ -0.57
CCDC163-204ENST00000628293 DCAF11Q8TEB1 546 aa11.48□□□□□ -0.57
CCDC163-204ENST00000628293 LRPPRCP42704 1394 aaKnown RBP11.48□□□□□ -0.57
CCDC163-204ENST00000628293 YTHDC2Q9H6S0 1430 aaKnown RBP11.48□□□□□ -0.57
CCDC163-204ENST00000628293 ADGRL3Q9HAR2 1447 aa11.48□□□□□ -0.57
CCDC163-204ENST00000628293 TRPM1Q7Z4N2 1603 aa11.48□□□□□ -0.57
CCDC163-204ENST00000628293 CFAP70Q5T0N1 1121 aa11.47□□□□□ -0.57
CCDC163-204ENST00000628293 DLC1Q96QB1 1528 aa11.46□□□□□ -0.57
CCDC163-204ENST00000628293 DCCP43146 1447 aa11.46□□□□□ -0.57
CCDC163-204ENST00000628293 MSH6P52701 1360 aa11.46□□□□□ -0.57
CCDC163-204ENST00000628293 TMEM132EQ6IEE7 984 aa11.46□□□□□ -0.57
CCDC163-204ENST00000628293 KDM2AQ9Y2K7 1162 aa11.46□□□□□ -0.57
CCDC163-204ENST00000628293 CDC42BPGQ6DT37 1551 aa11.45□□□□□ -0.58
CCDC163-204ENST00000628293 ABCC11Q96J66 1382 aa11.45□□□□□ -0.58
CCDC163-204ENST00000628293 STAC3Q96MF2 364 aa11.45□□□□□ -0.58
CCDC163-204ENST00000628293 PLEKHH1Q9ULM0 1364 aa11.44□□□□□ -0.58
CCDC163-204ENST00000628293 FMN2Q9NZ56 1722 aa11.44□□□□□ -0.58
CCDC163-204ENST00000628293 TOM1O60784 492 aa11.44□□□□□ -0.58
CCDC163-204ENST00000628293 L3MBTL2Q969R5 705 aa11.44□□□□□ -0.58
CCDC163-204ENST00000628293 FAM135BQ49AJ0 1406 aa11.43□□□□□ -0.58
CCDC163-204ENST00000628293 MST1RQ04912 1400 aa11.43□□□□□ -0.58
CCDC163-204ENST00000628293 NHSL1Q5SYE7 1610 aa11.42□□□□□ -0.58
CCDC163-204ENST00000628293 ADGRB2O60241 1585 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms