RNA–Protein interactions for RNA: ENST00000627622.1

CHD2-212, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 2 BASIC

Gene CHD2, Length 1,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-212ENST00000627622 SLC26A8Q96RN1 970 aa13.57□□□□□ -0.24
CHD2-212ENST00000627622 MYO5BQ9ULV0 1848 aa13.57□□□□□ -0.24
CHD2-212ENST00000627622 SLC52A1Q9NWF4 448 aa13.56□□□□□ -0.24
CHD2-212ENST00000627622 NWD1Q149M9 1564 aa13.55□□□□□ -0.24
CHD2-212ENST00000627622 CHD2O14647 1828 aaKnown RBP13.55□□□□□ -0.24
CHD2-212ENST00000627622 NKTRP30414 1462 aaKnown RBP13.54□□□□□ -0.24
CHD2-212ENST00000627622 RBM33Q96EV2 1170 aaKnown RBP13.54□□□□□ -0.24
CHD2-212ENST00000627622 ADGRL2O95490 1459 aa13.53□□□□□ -0.24
CHD2-212ENST00000627622 BCANQ96GW7 911 aa13.53□□□□□ -0.24
CHD2-212ENST00000627622 RPRD2Q5VT52 1461 aaKnown RBP13.53□□□□□ -0.24
CHD2-212ENST00000627622 GCC2Q8IWJ2 1684 aa13.53□□□□□ -0.24
CHD2-212ENST00000627622 PHLPP1O60346 1717 aa13.52□□□□□ -0.24
CHD2-212ENST00000627622 MSH6P52701 1360 aa13.52□□□□□ -0.25
CHD2-212ENST00000627622 POTEAQ6S8J7 498 aa13.51□□□□□ -0.25
CHD2-212ENST00000627622 ZFYVE9O95405 1425 aa13.5□□□□□ -0.25
CHD2-212ENST00000627622 HDGFP51858 240 aaKnown RBP13.5□□□□□ -0.25
CHD2-212ENST00000627622 SLAIN2Q9P270 581 aa13.5□□□□□ -0.25
CHD2-212ENST00000627622 TMEM131LA2VDJ0 1609 aa13.5□□□□□ -0.25
CHD2-212ENST00000627622 PLEKHG1Q9ULL1 1385 aa13.5□□□□□ -0.25
CHD2-212ENST00000627622 ANKRD50Q9ULJ7 1429 aa13.49□□□□□ -0.25
CHD2-212ENST00000627622 ADRA2BP18089 450 aa13.49□□□□□ -0.25
CHD2-212ENST00000627622 FAM50AQ14320 339 aaKnown RBP13.48□□□□□ -0.25
CHD2-212ENST00000627622 RIMS2Q9UQ26 1411 aa13.48□□□□□ -0.25
CHD2-212ENST00000627622 PPP1R15AO75807 674 aaPredicted RBP13.47□□□□□ -0.25
CHD2-212ENST00000627622 JCADQ9P266 1359 aa13.46□□□□□ -0.25
CHD2-212ENST00000627622 E9PCH4 1651 aa13.45□□□□□ -0.26
CHD2-212ENST00000627622 TBX22Q9Y458 520 aa13.45□□□□□ -0.26
CHD2-212ENST00000627622 NCOA3Q9Y6Q9 1424 aa13.45□□□□□ -0.26
CHD2-212ENST00000627622 UNC13BO14795 1591 aa13.45□□□□□ -0.26
CHD2-212ENST00000627622 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.44□□□□□ -0.26
CHD2-212ENST00000627622 COL16A1Q07092 1604 aaPredicted RBP13.44□□□□□ -0.26
CHD2-212ENST00000627622 SETD1AO15047 1707 aaKnown RBP13.44□□□□□ -0.26
CHD2-212ENST00000627622 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.44□□□□□ -0.26
CHD2-212ENST00000627622 CHGAP10645 457 aaKnown RBP13.43□□□□□ -0.26
CHD2-212ENST00000627622 DIP2AQ14689 1571 aa13.43□□□□□ -0.26
CHD2-212ENST00000627622 C14orf37Q86TY3 774 aa13.42□□□□□ -0.26
CHD2-212ENST00000627622 ADAMTS13Q76LX8 1427 aa13.41□□□□□ -0.26
CHD2-212ENST00000627622 IQGAP3Q86VI3 1631 aa13.41□□□□□ -0.26
CHD2-212ENST00000627622 PIK3R4Q99570 1358 aa13.41□□□□□ -0.26
CHD2-212ENST00000627622 NUTM2DQ5VT03 806 aaPredicted RBP13.4□□□□□ -0.26
CHD2-212ENST00000627622 CADPS2Q86UW7 1296 aa13.4□□□□□ -0.26
CHD2-212ENST00000627622 C19orf44Q9H6X5 657 aa13.4□□□□□ -0.26
CHD2-212ENST00000627622 SHPRHQ149N8 1683 aa13.4□□□□□ -0.26
CHD2-212ENST00000627622 SPATA31A6Q5VVP1 1343 aa13.39□□□□□ -0.27
CHD2-212ENST00000627622 AHDC1Q5TGY3 1603 aaPredicted RBP13.39□□□□□ -0.27
CHD2-212ENST00000627622 ATF3P18847 181 aa13.39□□□□□ -0.27
CHD2-212ENST00000627622 LRP6O75581 1613 aa13.38□□□□□ -0.27
CHD2-212ENST00000627622 TRPM2O94759 1503 aa13.38□□□□□ -0.27
CHD2-212ENST00000627622 ROCK1Q13464 1354 aa13.37□□□□□ -0.27
CHD2-212ENST00000627622 MEX3CQ5U5Q3 659 aaKnown RBP13.36□□□□□ -0.27
CHD2-212ENST00000627622 ZNF772Q68DY9 489 aaPredicted RBP13.36□□□□□ -0.27
CHD2-212ENST00000627622 AMOTL2Q9Y2J4 779 aa13.36□□□□□ -0.27
CHD2-212ENST00000627622 PTPRUQ92729 1446 aa13.35□□□□□ -0.27
CHD2-212ENST00000627622 NUP155O75694 1391 aa13.34□□□□□ -0.27
CHD2-212ENST00000627622 SPHKAPQ2M3C7 1700 aa13.34□□□□□ -0.27
CHD2-212ENST00000627622 XRN1Q8IZH2 1706 aaKnown RBP13.34□□□□□ -0.27
CHD2-212ENST00000627622 BRINP3Q76B58 766 aa13.33□□□□□ -0.27
CHD2-212ENST00000627622 NRXN3Q9Y4C0 1643 aa13.33□□□□□ -0.28
CHD2-212ENST00000627622 DCCP43146 1447 aa13.33□□□□□ -0.28
CHD2-212ENST00000627622 SETBP1Q9Y6X0 1596 aa13.32□□□□□ -0.28
CHD2-212ENST00000627622 TRIM52Q96A61 297 aa13.31□□□□□ -0.28
CHD2-212ENST00000627622 NHSL1Q5SYE7 1610 aa13.31□□□□□ -0.28
CHD2-212ENST00000627622 UPF1Q92900 1129 aaKnown RBP eCLIP13.3□□□□□ -0.28
CHD2-212ENST00000627622 ASXL1Q8IXJ9 1541 aa13.3□□□□□ -0.28
CHD2-212ENST00000627622 NUTM2BA6NNL0 878 aaPredicted RBP13.29□□□□□ -0.28
CHD2-212ENST00000627622 NUTM2EB1AL46 878 aaPredicted RBP13.29□□□□□ -0.28
CHD2-212ENST00000627622 RXRBP28702 533 aa13.29□□□□□ -0.28
CHD2-212ENST00000627622 ITGAEP38570 1179 aa13.29□□□□□ -0.28
CHD2-212ENST00000627622 NUTM2AQ8IVF1 878 aaPredicted RBP13.29□□□□□ -0.28
CHD2-212ENST00000627622 MST1RQ04912 1400 aa13.29□□□□□ -0.28
CHD2-212ENST00000627622 SETD5Q9C0A6 1442 aa13.29□□□□□ -0.28
CHD2-212ENST00000627622 ZNF326Q5BKZ1 582 aaKnown RBP13.28□□□□□ -0.28
CHD2-212ENST00000627622 KIF1BO60333 1816 aa13.28□□□□□ -0.28
CHD2-212ENST00000627622 CDK12Q9NYV4 1490 aaPredicted RBP13.27□□□□□ -0.29
CHD2-212ENST00000627622 METP08581 1390 aa13.27□□□□□ -0.29
CHD2-212ENST00000627622 LRRC59Q96AG4 307 aaKnown RBP13.27□□□□□ -0.29
CHD2-212ENST00000627622 NALCNQ8IZF0 1738 aa13.26□□□□□ -0.29
CHD2-212ENST00000627622 AFF2P51816 1311 aa13.26□□□□□ -0.29
CHD2-212ENST00000627622 CLTCL1P53675 1640 aa13.25□□□□□ -0.29
CHD2-212ENST00000627622 NEXMIFQ5QGS0 1516 aa13.25□□□□□ -0.29
CHD2-212ENST00000627622 ADGRL3Q9HAR2 1447 aa13.25□□□□□ -0.29
CHD2-212ENST00000627622 DDX17Q92841 729 aaKnown RBP13.22□□□□□ -0.29
CHD2-212ENST00000627622 PNPLA6Q8IY17 1366 aa13.22□□□□□ -0.29
CHD2-212ENST00000627622 C8orf37Q96NL8 207 aa13.22□□□□□ -0.29
CHD2-212ENST00000627622 LAMC1P11047 1609 aa13.21□□□□□ -0.29
CHD2-212ENST00000627622 QTRT2Q9H974 415 aaKnown RBP13.21□□□□□ -0.3
CHD2-212ENST00000627622 RBM6P78332 1123 aaKnown RBP13.2□□□□□ -0.3
CHD2-212ENST00000627622 C1orf167Q5SNV9 1468 aa13.19□□□□□ -0.3
CHD2-212ENST00000627622 PPARGC1BQ86YN6 1023 aaKnown RBP13.19□□□□□ -0.3
CHD2-212ENST00000627622 RGS12O14924 1447 aa13.18□□□□□ -0.3
CHD2-212ENST00000627622 PTCH1Q13635 1447 aa13.18□□□□□ -0.3
CHD2-212ENST00000627622 VGFO15240 615 aaPredicted RBP13.18□□□□□ -0.3
CHD2-212ENST00000627622 NGLY1Q96IV0 654 aa13.17□□□□□ -0.3
CHD2-212ENST00000627622 ADAMTS2O95450 1211 aa13.16□□□□□ -0.3
CHD2-212ENST00000627622 PPLO60437 1756 aa13.16□□□□□ -0.3
CHD2-212ENST00000627622 SOS2Q07890 1332 aaPredicted RBP13.16□□□□□ -0.3
CHD2-212ENST00000627622 ORAI2Q96SN7 254 aa13.16□□□□□ -0.3
CHD2-212ENST00000627622 NAIPQ13075 1403 aa13.15□□□□□ -0.3
CHD2-212ENST00000627622 ROBO2Q9HCK4 1378 aa13.15□□□□□ -0.3
CHD2-212ENST00000627622 RPGRIP1LQ68CZ1 1315 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms