RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 PSME1Q06323 249 aa15.73■□□□□ 0.11
SCN8A-209ENST00000627620 SYNE3Q6ZMZ3 975 aa15.73■□□□□ 0.11
SCN8A-209ENST00000627620 API5Q9BZZ5 524 aaKnown RBP15.73■□□□□ 0.11
SCN8A-209ENST00000627620 RUFY2Q8WXA3 655 aa15.73■□□□□ 0.11
SCN8A-209ENST00000627620 TPD52L1Q16890 204 aaPredicted RBP15.72■□□□□ 0.11
SCN8A-209ENST00000627620 DZIP1LQ8IYY4 767 aaKnown RBP15.72■□□□□ 0.11
SCN8A-209ENST00000627620 A0A0U1RQG5 324 aaPredicted RBP15.72■□□□□ 0.11
SCN8A-209ENST00000627620 IFIT2P09913 472 aaKnown RBP15.71■□□□□ 0.11
SCN8A-209ENST00000627620 MCTP1Q6DN14 999 aa15.71■□□□□ 0.11
SCN8A-209ENST00000627620 GOLGA6L1Q8N7Z2 621 aa15.71■□□□□ 0.11
SCN8A-209ENST00000627620 REC8O95072 547 aa15.71■□□□□ 0.11
SCN8A-209ENST00000627620 OSCARQ8IYS5 282 aa15.71■□□□□ 0.11
SCN8A-209ENST00000627620 CEP89Q96ST8 783 aa15.71■□□□□ 0.11
SCN8A-209ENST00000627620 MYOM3Q5VTT5 1437 aa15.71■□□□□ 0.11
SCN8A-209ENST00000627620 MSH5O43196 834 aa15.71■□□□□ 0.1
SCN8A-209ENST00000627620 ZKSCAN1P17029 563 aaPredicted RBP15.7■□□□□ 0.1
SCN8A-209ENST00000627620 SMARCA4P51532 1647 aa15.7■□□□□ 0.1
SCN8A-209ENST00000627620 FKBP5Q13451 457 aaPredicted RBP15.7■□□□□ 0.1
SCN8A-209ENST00000627620 DDX58O95786 925 aaKnown RBP15.7■□□□□ 0.1
SCN8A-209ENST00000627620 GOLGA6L19H0YKK7 550 aa15.69■□□□□ 0.1
SCN8A-209ENST00000627620 RUNDC1Q96C34 613 aa15.69■□□□□ 0.1
SCN8A-209ENST00000627620 SKOR2Q2VWA4 1001 aaPredicted RBP15.69■□□□□ 0.1
SCN8A-209ENST00000627620 CPLX2Q6PUV4 134 aaKnown RBP15.69■□□□□ 0.1
SCN8A-209ENST00000627620 USP35Q9P2H5 1018 aa15.69■□□□□ 0.1
SCN8A-209ENST00000627620 BECN2A8MW95 431 aa15.69■□□□□ 0.1
SCN8A-209ENST00000627620 SYTL4Q96C24 671 aaPredicted RBP15.69■□□□□ 0.1
SCN8A-209ENST00000627620 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.69■□□□□ 0.1
SCN8A-209ENST00000627620 NOL10Q9BSC4 688 aaKnown RBP15.69■□□□□ 0.1
SCN8A-209ENST00000627620 AMOTL1Q8IY63 956 aa15.68■□□□□ 0.1
SCN8A-209ENST00000627620 ANO2Q9NQ90 1003 aa15.68■□□□□ 0.1
SCN8A-209ENST00000627620 APPP05067 770 aa15.67■□□□□ 0.1
SCN8A-209ENST00000627620 TSR1Q2NL82 804 aaKnown RBP15.67■□□□□ 0.1
SCN8A-209ENST00000627620 G3BP1Q13283 466 aaKnown RBP eCLIP15.67■□□□□ 0.1
SCN8A-209ENST00000627620 ROCK1Q13464 1354 aa15.67■□□□□ 0.1
SCN8A-209ENST00000627620 ZNF644Q9H582 1327 aaPredicted RBP15.67■□□□□ 0.1
SCN8A-209ENST00000627620 GAPVD1Q14C86 1478 aa15.67■□□□□ 0.1
SCN8A-209ENST00000627620 PRM3Q9NNZ6 103 aa15.67■□□□□ 0.1
SCN8A-209ENST00000627620 TRIM29Q14134 588 aa15.66■□□□□ 0.1
SCN8A-209ENST00000627620 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.66■□□□□ 0.1
SCN8A-209ENST00000627620 RAD21O60216 631 aa15.66■□□□□ 0.1
SCN8A-209ENST00000627620 TSPYL4Q9UJ04 414 aa15.66■□□□□ 0.1
SCN8A-209ENST00000627620 GNAI1P63096 354 aa15.66■□□□□ 0.1
SCN8A-209ENST00000627620 HMOX1P09601 288 aa15.65■□□□□ 0.1
SCN8A-209ENST00000627620 CPLX1O14810 134 aa15.65■□□□□ 0.1
SCN8A-209ENST00000627620 IGF1RP08069 1367 aa15.65■□□□□ 0.1
SCN8A-209ENST00000627620 VPS37DQ86XT2 251 aa15.64■□□□□ 0.09
SCN8A-209ENST00000627620 TRIM34Q9BYJ4 488 aa15.64■□□□□ 0.09
SCN8A-209ENST00000627620 FAM69CQ0P6D2 419 aa15.64■□□□□ 0.09
SCN8A-209ENST00000627620 FGD5Q6ZNL6 1462 aa15.64■□□□□ 0.09
SCN8A-209ENST00000627620 KIF7Q2M1P5 1343 aa15.63■□□□□ 0.09
SCN8A-209ENST00000627620 TPM2P07951 284 aa15.63■□□□□ 0.09
SCN8A-209ENST00000627620 FGD6Q6ZV73 1430 aa15.63■□□□□ 0.09
SCN8A-209ENST00000627620 RNF20Q5VTR2 975 aa15.63■□□□□ 0.09
SCN8A-209ENST00000627620 STAC3Q96MF2 364 aa15.63■□□□□ 0.09
SCN8A-209ENST00000627620 GGNBP2Q9H3C7 697 aa15.63■□□□□ 0.09
SCN8A-209ENST00000627620 TPM1P09493 284 aa15.63■□□□□ 0.09
SCN8A-209ENST00000627620 TRDNQ13061 729 aa15.62■□□□□ 0.09
SCN8A-209ENST00000627620 CCDC7Q96M83 1385 aa15.62■□□□□ 0.09
SCN8A-209ENST00000627620 GSE1Q14687 1217 aa15.62■□□□□ 0.09
SCN8A-209ENST00000627620 RAPGEF4Q8WZA2 1011 aa15.62■□□□□ 0.09
SCN8A-209ENST00000627620 CABP2Q9NPB3 220 aa15.61■□□□□ 0.09
SCN8A-209ENST00000627620 RAD54L2Q9Y4B4 1467 aa15.61■□□□□ 0.09
SCN8A-209ENST00000627620 HSP90AB4PQ58FF6 505 aa15.61■□□□□ 0.09
SCN8A-209ENST00000627620 DHX16O60231 1041 aaKnown RBP15.6■□□□□ 0.09
SCN8A-209ENST00000627620 TNNT3P45378 269 aaPredicted RBP15.6■□□□□ 0.09
SCN8A-209ENST00000627620 CCAR2Q8N163 923 aaKnown RBP15.6■□□□□ 0.09
SCN8A-209ENST00000627620 INTS3Q68E01 1043 aaKnown RBP15.6■□□□□ 0.09
SCN8A-209ENST00000627620 LNPKQ9C0E8 428 aa15.6■□□□□ 0.09
SCN8A-209ENST00000627620 TCEAL9Q9UHQ7 104 aa15.6■□□□□ 0.09
SCN8A-209ENST00000627620 TMEM132EQ6IEE7 984 aa15.59■□□□□ 0.09
SCN8A-209ENST00000627620 ANO8Q9HCE9 1232 aaPredicted RBP15.59■□□□□ 0.09
SCN8A-209ENST00000627620 MIA2Q96PC5 1412 aa15.59■□□□□ 0.09
SCN8A-209ENST00000627620 CUX1P39880 1505 aa15.59■□□□□ 0.09
SCN8A-209ENST00000627620 NFXL1Q6ZNB6 911 aa15.59■□□□□ 0.09
SCN8A-209ENST00000627620 CTDP1Q9Y5B0 961 aaPredicted RBP15.59■□□□□ 0.09
SCN8A-209ENST00000627620 ATF3P18847 181 aa15.59■□□□□ 0.09
SCN8A-209ENST00000627620 NUTM2GQ5VZR2 741 aa15.59■□□□□ 0.09
SCN8A-209ENST00000627620 RIC3Q7Z5B4 369 aa15.59■□□□□ 0.09
SCN8A-209ENST00000627620 ERC2O15083 957 aa15.58■□□□□ 0.09
SCN8A-209ENST00000627620 BICD2Q8TD16 824 aa15.58■□□□□ 0.09
SCN8A-209ENST00000627620 FBXW7Q969H0 707 aa15.58■□□□□ 0.09
SCN8A-209ENST00000627620 ANKRD50Q9ULJ7 1429 aa15.58■□□□□ 0.08
SCN8A-209ENST00000627620 AIMP1Q12904 312 aaKnown RBP15.58■□□□□ 0.08
SCN8A-209ENST00000627620 NLRP2Q9NX02 1062 aa15.58■□□□□ 0.08
SCN8A-209ENST00000627620 CHMP5Q9NZZ3 219 aa15.58■□□□□ 0.08
SCN8A-209ENST00000627620 MEX3CQ5U5Q3 659 aaKnown RBP15.58■□□□□ 0.08
SCN8A-209ENST00000627620 VPS37CA5D8V6 355 aaPredicted RBP15.57■□□□□ 0.08
SCN8A-209ENST00000627620 CCDC47Q96A33 483 aaKnown RBP15.57■□□□□ 0.08
SCN8A-209ENST00000627620 PANK1Q8TE04 598 aa15.57■□□□□ 0.08
SCN8A-209ENST00000627620 ERICH2A1L162 156 aa15.57■□□□□ 0.08
SCN8A-209ENST00000627620 PCMTD1Q96MG8 357 aaPredicted RBP15.57■□□□□ 0.08
SCN8A-209ENST00000627620 SMC3Q9UQE7 1217 aa15.57■□□□□ 0.08
SCN8A-209ENST00000627620 NEUROD6Q96NK8 337 aa15.56■□□□□ 0.08
SCN8A-209ENST00000627620 NLRP6P59044 892 aa15.56■□□□□ 0.08
SCN8A-209ENST00000627620 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.55■□□□□ 0.08
SCN8A-209ENST00000627620 CNTLNQ9NXG0 1405 aa15.55■□□□□ 0.08
SCN8A-209ENST00000627620 ANKRD20A12PQ8NF67 263 aa15.55■□□□□ 0.08
SCN8A-209ENST00000627620 UBTFL1P0CB47 393 aaPredicted RBP15.55■□□□□ 0.08
SCN8A-209ENST00000627620 HOOK1Q9UJC3 728 aaKnown RBP15.54■□□□□ 0.08
SCN8A-209ENST00000627620 WWC1Q8IX03 1113 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms