RNA–Protein interactions for RNA: ENST00000627212.2

RAPGEF6-215, Transcript of Rap guanine nucleotide exchange factor 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF6, Length 4,694 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF6-215ENST00000627212 NBPF8Q3BBV2 869 aa12.26□□□□□ -0.45
RAPGEF6-215ENST00000627212 TMEM132EQ6IEE7 984 aa12.26□□□□□ -0.45
RAPGEF6-215ENST00000627212 CNTLNQ9NXG0 1405 aa12.25□□□□□ -0.45
RAPGEF6-215ENST00000627212 BCAR3O75815 825 aa12.25□□□□□ -0.45
RAPGEF6-215ENST00000627212 NBPF1Q3BBV0 1214 aa12.25□□□□□ -0.45
RAPGEF6-215ENST00000627212 DIAPH1O60610 1272 aaKnown RBP12.25□□□□□ -0.45
RAPGEF6-215ENST00000627212 FAM43AQ8N2R8 423 aa12.25□□□□□ -0.45
RAPGEF6-215ENST00000627212 PES1O00541 588 aaKnown RBP12.25□□□□□ -0.45
RAPGEF6-215ENST00000627212 FAM184AQ8NB25 1140 aa12.25□□□□□ -0.45
RAPGEF6-215ENST00000627212 COG3Q96JB2 828 aa12.25□□□□□ -0.45
RAPGEF6-215ENST00000627212 VPS37CA5D8V6 355 aaPredicted RBP12.24□□□□□ -0.45
RAPGEF6-215ENST00000627212 TPM4P67936 248 aa12.24□□□□□ -0.45
RAPGEF6-215ENST00000627212 CSPP1Q1MSJ5 1256 aa12.24□□□□□ -0.45
RAPGEF6-215ENST00000627212 DIAPH3Q9NSV4 1193 aa12.24□□□□□ -0.45
RAPGEF6-215ENST00000627212 IGF1RP08069 1367 aa12.24□□□□□ -0.45
RAPGEF6-215ENST00000627212 FOSBP53539 338 aa12.24□□□□□ -0.45
RAPGEF6-215ENST00000627212 MPNDQ8N594 471 aa12.24□□□□□ -0.45
RAPGEF6-215ENST00000627212 PDS5BQ9NTI5 1447 aa12.24□□□□□ -0.45
RAPGEF6-215ENST00000627212 GOLGA6L19H0YKK7 550 aa12.23□□□□□ -0.45
RAPGEF6-215ENST00000627212 EVC2Q86UK5 1308 aa12.23□□□□□ -0.45
RAPGEF6-215ENST00000627212 FKBP5Q13451 457 aaPredicted RBP12.23□□□□□ -0.45
RAPGEF6-215ENST00000627212 TCP11L2Q8N4U5 519 aa12.23□□□□□ -0.45
RAPGEF6-215ENST00000627212 RUNDC1Q96C34 613 aa12.23□□□□□ -0.45
RAPGEF6-215ENST00000627212 REC8O95072 547 aa12.23□□□□□ -0.45
RAPGEF6-215ENST00000627212 MTHFSP49914 203 aa12.23□□□□□ -0.45
RAPGEF6-215ENST00000627212 FGD6Q6ZV73 1430 aa12.23□□□□□ -0.45
RAPGEF6-215ENST00000627212 C1orf115Q9H7X2 142 aa12.22□□□□□ -0.45
RAPGEF6-215ENST00000627212 MSH5O43196 834 aa12.22□□□□□ -0.45
RAPGEF6-215ENST00000627212 TRAK2O60296 914 aa12.22□□□□□ -0.45
RAPGEF6-215ENST00000627212 NOC3LQ8WTT2 800 aaKnown RBP12.22□□□□□ -0.45
RAPGEF6-215ENST00000627212 SMARCA2P51531 1590 aa12.21□□□□□ -0.45
RAPGEF6-215ENST00000627212 TEFQ10587 303 aa12.21□□□□□ -0.45
RAPGEF6-215ENST00000627212 PDZRN3Q9UPQ7 1066 aa12.21□□□□□ -0.45
RAPGEF6-215ENST00000627212 R3HCC1Q9Y3T6 440 aaKnown RBP12.21□□□□□ -0.45
RAPGEF6-215ENST00000627212 C9orf78Q9NZ63 289 aaPredicted RBP12.21□□□□□ -0.46
RAPGEF6-215ENST00000627212 UACAQ9BZF9 1416 aa12.21□□□□□ -0.46
RAPGEF6-215ENST00000627212 BACH2Q9BYV9 841 aa12.2□□□□□ -0.46
RAPGEF6-215ENST00000627212 CABP2Q9NPB3 220 aa12.2□□□□□ -0.46
RAPGEF6-215ENST00000627212 VGFO15240 615 aaPredicted RBP12.2□□□□□ -0.46
RAPGEF6-215ENST00000627212 BICD2Q8TD16 824 aa12.2□□□□□ -0.46
RAPGEF6-215ENST00000627212 TSR2Q969E8 191 aaKnown RBP12.2□□□□□ -0.46
RAPGEF6-215ENST00000627212 CFAP70Q5T0N1 1121 aa12.2□□□□□ -0.46
RAPGEF6-215ENST00000627212 PNISRQ8TF01 805 aaKnown RBP12.19□□□□□ -0.46
RAPGEF6-215ENST00000627212 ZNF428Q96B54 188 aa12.19□□□□□ -0.46
RAPGEF6-215ENST00000627212 HDAC5Q9UQL6 1122 aa12.19□□□□□ -0.46
RAPGEF6-215ENST00000627212 ATP6V1DQ9Y5K8 247 aa12.19□□□□□ -0.46
RAPGEF6-215ENST00000627212 ATAD2BQ9ULI0 1458 aa12.19□□□□□ -0.46
RAPGEF6-215ENST00000627212 API5Q9BZZ5 524 aaKnown RBP12.19□□□□□ -0.46
RAPGEF6-215ENST00000627212 CAVIN1Q6NZI2 390 aaKnown RBP12.19□□□□□ -0.46
RAPGEF6-215ENST00000627212 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.18□□□□□ -0.46
RAPGEF6-215ENST00000627212 KIF21BO75037 1637 aa12.18□□□□□ -0.46
RAPGEF6-215ENST00000627212 PPP2R1AP30153 589 aa12.18□□□□□ -0.46
RAPGEF6-215ENST00000627212 NASPP49321 788 aaPredicted RBP12.18□□□□□ -0.46
RAPGEF6-215ENST00000627212 EXOSC9Q06265 439 aaKnown RBP12.18□□□□□ -0.46
RAPGEF6-215ENST00000627212 ZKSCAN1P17029 563 aaPredicted RBP12.18□□□□□ -0.46
RAPGEF6-215ENST00000627212 CHMP4AQ9BY43 222 aa12.18□□□□□ -0.46
RAPGEF6-215ENST00000627212 KIF3AQ9Y496 699 aa12.17□□□□□ -0.46
RAPGEF6-215ENST00000627212 ZNF771Q7L3S4 317 aaPredicted RBP12.17□□□□□ -0.46
RAPGEF6-215ENST00000627212 IFIT2P09913 472 aaKnown RBP12.16□□□□□ -0.46
RAPGEF6-215ENST00000627212 NUTM2GQ5VZR2 741 aa12.16□□□□□ -0.46
RAPGEF6-215ENST00000627212 CCDC34Q96HJ3 373 aa12.16□□□□□ -0.46
RAPGEF6-215ENST00000627212 EID1Q9Y6B2 187 aa12.16□□□□□ -0.46
RAPGEF6-215ENST00000627212 MRE11P49959 708 aa12.16□□□□□ -0.46
RAPGEF6-215ENST00000627212 CCDC27Q2M243 656 aa12.16□□□□□ -0.46
RAPGEF6-215ENST00000627212 SMC3Q9UQE7 1217 aa12.16□□□□□ -0.46
RAPGEF6-215ENST00000627212 TPM3P06753 285 aa12.16□□□□□ -0.46
RAPGEF6-215ENST00000627212 NUCB2P80303 420 aa12.16□□□□□ -0.46
RAPGEF6-215ENST00000627212 INTS3Q68E01 1043 aaKnown RBP12.16□□□□□ -0.46
RAPGEF6-215ENST00000627212 GOLGA6L1Q8N7Z2 621 aa12.16□□□□□ -0.46
RAPGEF6-215ENST00000627212 MYOM3Q5VTT5 1437 aa12.15□□□□□ -0.46
RAPGEF6-215ENST00000627212 BRD4O60885 1362 aaPredicted RBP12.15□□□□□ -0.46
RAPGEF6-215ENST00000627212 C11orf95C9JLR9 678 aaPredicted RBP12.15□□□□□ -0.46
RAPGEF6-215ENST00000627212 GTF2E1P29083 439 aaPredicted RBP12.15□□□□□ -0.46
RAPGEF6-215ENST00000627212 RBM10P98175 930 aaKnown RBP12.15□□□□□ -0.46
RAPGEF6-215ENST00000627212 SLC12A5Q9H2X9 1139 aa12.15□□□□□ -0.46
RAPGEF6-215ENST00000627212 PRPF40AO75400 957 aaKnown RBP12.15□□□□□ -0.46
RAPGEF6-215ENST00000627212 NEK4P51957 841 aa12.15□□□□□ -0.46
RAPGEF6-215ENST00000627212 TSPYL4Q9UJ04 414 aa12.15□□□□□ -0.46
RAPGEF6-215ENST00000627212 ARAP1Q96P48 1450 aa12.15□□□□□ -0.47
RAPGEF6-215ENST00000627212 RAD54L2Q9Y4B4 1467 aa12.15□□□□□ -0.47
RAPGEF6-215ENST00000627212 TPD52L1Q16890 204 aaPredicted RBP12.14□□□□□ -0.47
RAPGEF6-215ENST00000627212 HOMER1Q86YM7 354 aa12.14□□□□□ -0.47
RAPGEF6-215ENST00000627212 IFT57Q9NWB7 429 aa12.14□□□□□ -0.47
RAPGEF6-215ENST00000627212 LRRC9Q6ZRR7 1453 aa12.14□□□□□ -0.47
RAPGEF6-215ENST00000627212 PTPRGP23470 1445 aa12.14□□□□□ -0.47
RAPGEF6-215ENST00000627212 KDM4AO75164 1064 aa12.14□□□□□ -0.47
RAPGEF6-215ENST00000627212 APPP05067 770 aa12.14□□□□□ -0.47
RAPGEF6-215ENST00000627212 AIMP1Q12904 312 aaKnown RBP12.14□□□□□ -0.47
RAPGEF6-215ENST00000627212 AFAP1Q8N556 730 aa12.13□□□□□ -0.47
RAPGEF6-215ENST00000627212 A0A0U1RQG5 324 aaPredicted RBP12.13□□□□□ -0.47
RAPGEF6-215ENST00000627212 C1orf141Q5JVX7 400 aa12.13□□□□□ -0.47
RAPGEF6-215ENST00000627212 RUFY2Q8WXA3 655 aa12.13□□□□□ -0.47
RAPGEF6-215ENST00000627212 GNAI1P63096 354 aa12.13□□□□□ -0.47
RAPGEF6-215ENST00000627212 ANKRD50Q9ULJ7 1429 aa12.13□□□□□ -0.47
RAPGEF6-215ENST00000627212 CPLX1O14810 134 aa12.12□□□□□ -0.47
RAPGEF6-215ENST00000627212 CDC45O75419 566 aa12.12□□□□□ -0.47
RAPGEF6-215ENST00000627212 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.12□□□□□ -0.47
RAPGEF6-215ENST00000627212 NEXNQ0ZGT2 675 aa12.12□□□□□ -0.47
RAPGEF6-215ENST00000627212 PRKAR2BP31323 418 aa12.11□□□□□ -0.47
RAPGEF6-215ENST00000627212 C20orf194Q5TEA3 1177 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms