RNA–Protein interactions for RNA: ENST00000627185.1

CHD2-209, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 3

Gene CHD2, Length 533 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-209ENST00000627185 UHRF1BP1LA0JNW5 1464 aa11.83□□□□□ -0.52
CHD2-209ENST00000627185 CDC42BPAQ5VT25 1732 aa11.83□□□□□ -0.52
CHD2-209ENST00000627185 C9orf84Q5VXU9 1444 aa11.83□□□□□ -0.52
CHD2-209ENST00000627185 CNTLNQ9NXG0 1405 aa11.83□□□□□ -0.52
CHD2-209ENST00000627185 ATMINO43313 823 aaPredicted RBP11.82□□□□□ -0.52
CHD2-209ENST00000627185 GABBR2O75899 941 aa11.82□□□□□ -0.52
CHD2-209ENST00000627185 HSPA5P11021 654 aaKnown RBP11.82□□□□□ -0.52
CHD2-209ENST00000627185 ASTLQ6HA08 431 aaPredicted RBP11.82□□□□□ -0.52
CHD2-209ENST00000627185 WASHC2AQ641Q2 1341 aa11.82□□□□□ -0.52
CHD2-209ENST00000627185 ATN1P54259 1190 aaPredicted RBP11.81□□□□□ -0.52
CHD2-209ENST00000627185 SUPT16HQ9Y5B9 1047 aaKnown RBP11.81□□□□□ -0.52
CHD2-209ENST00000627185 CCDC141Q6ZP82 1450 aa11.81□□□□□ -0.52
CHD2-209ENST00000627185 CCDC7Q96M83 1385 aa11.8□□□□□ -0.52
CHD2-209ENST00000627185 PREX2Q70Z35 1606 aa11.8□□□□□ -0.52
CHD2-209ENST00000627185 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.8□□□□□ -0.522e-10■■■■□ 23.6
CHD2-209ENST00000627185 POLR1AO95602 1720 aaPredicted RBP11.8□□□□□ -0.52
CHD2-209ENST00000627185 ATP10AO60312 1499 aa11.79□□□□□ -0.52
CHD2-209ENST00000627185 ARAP3Q8WWN8 1544 aa11.79□□□□□ -0.52
CHD2-209ENST00000627185 ABCC2Q92887 1545 aa11.79□□□□□ -0.52
CHD2-209ENST00000627185 TSPY4P0CV99 314 aa11.78□□□□□ -0.52
CHD2-209ENST00000627185 TSPY10P0CW01 314 aa11.78□□□□□ -0.52
CHD2-209ENST00000627185 ERICH6BQ5W0A0 696 aa11.78□□□□□ -0.52
CHD2-209ENST00000627185 ROCK2O75116 1388 aaKnown RBP11.78□□□□□ -0.52
CHD2-209ENST00000627185 RALGAPBQ86X10 1494 aa11.77□□□□□ -0.52
CHD2-209ENST00000627185 PLXNC1O60486 1568 aa11.76□□□□□ -0.53
CHD2-209ENST00000627185 NBPF8Q3BBV2 869 aa11.76□□□□□ -0.53
CHD2-209ENST00000627185 IER5LQ5T953 404 aa11.76□□□□□ -0.53
CHD2-209ENST00000627185 KTN1Q86UP2 1357 aaKnown RBP11.75□□□□□ -0.53
CHD2-209ENST00000627185 KIF15Q9NS87 1388 aa11.75□□□□□ -0.53
CHD2-209ENST00000627185 MAGI2Q86UL8 1455 aa11.75□□□□□ -0.53
CHD2-209ENST00000627185 KCNH8Q96L42 1107 aa11.74□□□□□ -0.53
CHD2-209ENST00000627185 CLASP1Q7Z460 1538 aa11.74□□□□□ -0.53
CHD2-209ENST00000627185 UNC13BO14795 1591 aa11.74□□□□□ -0.53
CHD2-209ENST00000627185 SAMD9LQ8IVG5 1584 aa11.74□□□□□ -0.53
CHD2-209ENST00000627185 CDC42BPBQ9Y5S2 1711 aa11.72□□□□□ -0.53
CHD2-209ENST00000627185 NUP155O75694 1391 aa11.72□□□□□ -0.53
CHD2-209ENST00000627185 IRX5P78411 483 aaPredicted RBP11.72□□□□□ -0.53
CHD2-209ENST00000627185 STAC3Q96MF2 364 aa11.72□□□□□ -0.53
CHD2-209ENST00000627185 PRKRIP1Q9H875 184 aaPredicted RBP11.72□□□□□ -0.53
CHD2-209ENST00000627185 WDR70Q9NW82 654 aa11.72□□□□□ -0.53
CHD2-209ENST00000627185 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.71□□□□□ -0.53
CHD2-209ENST00000627185 RTEL1-TNFRSF6BF6WH68 1400 aa11.71□□□□□ -0.53
CHD2-209ENST00000627185 PLCH2O75038 1416 aa11.71□□□□□ -0.53
CHD2-209ENST00000627185 ERBINQ96RT1 1412 aa11.71□□□□□ -0.53
CHD2-209ENST00000627185 GPRASP1Q5JY77 1395 aa11.71□□□□□ -0.53
CHD2-209ENST00000627185 MYT1Q01538 1121 aa11.71□□□□□ -0.53
CHD2-209ENST00000627185 PDCD7Q8N8D1 485 aaKnown RBP11.71□□□□□ -0.53
CHD2-209ENST00000627185 KIF7Q2M1P5 1343 aa11.7□□□□□ -0.54
CHD2-209ENST00000627185 KDM5CP41229 1560 aa11.7□□□□□ -0.54
CHD2-209ENST00000627185 DUOX2Q9NRD8 1548 aa11.7□□□□□ -0.54
CHD2-209ENST00000627185 NCKAP5LQ9HCH0 1330 aa11.69□□□□□ -0.54
CHD2-209ENST00000627185 LAMC1P11047 1609 aa11.69□□□□□ -0.54
CHD2-209ENST00000627185 ARID3CA6NKF2 412 aa11.69□□□□□ -0.54
CHD2-209ENST00000627185 DCBLD2Q96PD2 775 aa11.69□□□□□ -0.54
CHD2-209ENST00000627185 OCEL1Q9H607 264 aa11.69□□□□□ -0.54
CHD2-209ENST00000627185 FAM135AQ9P2D6 1515 aa11.69□□□□□ -0.54
CHD2-209ENST00000627185 CHD1O14646 1710 aa11.69□□□□□ -0.54
CHD2-209ENST00000627185 USP47Q96K76 1375 aa11.68□□□□□ -0.54
CHD2-209ENST00000627185 DPY19L2Q6NUT2 758 aa11.68□□□□□ -0.54
CHD2-209ENST00000627185 HIRIP3Q9BW71 556 aaPredicted RBP11.68□□□□□ -0.54
CHD2-209ENST00000627185 WDR7Q9Y4E6 1490 aa11.68□□□□□ -0.54
CHD2-209ENST00000627185 IQGAP3Q86VI3 1631 aa11.68□□□□□ -0.54
CHD2-209ENST00000627185 DHX29Q7Z478 1369 aaKnown RBP11.67□□□□□ -0.54
CHD2-209ENST00000627185 NEURL4Q96JN8 1562 aa11.67□□□□□ -0.54
CHD2-209ENST00000627185 C11orf95C9JLR9 678 aaPredicted RBP11.67□□□□□ -0.54
CHD2-209ENST00000627185 NBR1Q14596 966 aa11.67□□□□□ -0.54
CHD2-209ENST00000627185 CRISPLD2Q9H0B8 497 aa11.67□□□□□ -0.54
CHD2-209ENST00000627185 INSRP06213 1382 aa11.67□□□□□ -0.54
CHD2-209ENST00000627185 PDE4AP27815 886 aa11.66□□□□□ -0.54
CHD2-209ENST00000627185 SP7Q8TDD2 431 aaPredicted RBP11.66□□□□□ -0.54
CHD2-209ENST00000627185 ZNF777Q9ULD5 760 aaPredicted RBP11.66□□□□□ -0.54
CHD2-209ENST00000627185 ZBED9Q6R2W3 1325 aa11.65□□□□□ -0.54
CHD2-209ENST00000627185 WASHC2CQ9Y4E1 1318 aa11.65□□□□□ -0.54
CHD2-209ENST00000627185 TTC37Q6PGP7 1564 aa11.65□□□□□ -0.54
CHD2-209ENST00000627185 MYO5CQ9NQX4 1742 aa11.65□□□□□ -0.54
CHD2-209ENST00000627185 NEFLP07196 543 aa11.64□□□□□ -0.55
CHD2-209ENST00000627185 MFSD10Q14728 455 aa11.64□□□□□ -0.55
CHD2-209ENST00000627185 KCNV2Q8TDN2 545 aa11.64□□□□□ -0.55
CHD2-209ENST00000627185 ARHGAP5Q13017 1502 aa11.64□□□□□ -0.55
CHD2-209ENST00000627185 ZMYM4Q5VZL5 1548 aa11.64□□□□□ -0.55
CHD2-209ENST00000627185 SYCP2Q9BX26 1530 aa11.64□□□□□ -0.55
CHD2-209ENST00000627185 PLA2R1Q13018 1463 aa11.63□□□□□ -0.55
CHD2-209ENST00000627185 PRAG1Q86YV5 1406 aa11.63□□□□□ -0.55
CHD2-209ENST00000627185 PLCG2P16885 1265 aa11.63□□□□□ -0.55
CHD2-209ENST00000627185 HNRNPMP52272 730 aaKnown RBP eCLIP11.63□□□□□ -0.55
CHD2-209ENST00000627185 EFCAB2Q5VUJ9 269 aa11.63□□□□□ -0.55
CHD2-209ENST00000627185 MICALL2Q8IY33 904 aa11.63□□□□□ -0.55
CHD2-209ENST00000627185 ABCC1P33527 1531 aa11.63□□□□□ -0.55
CHD2-209ENST00000627185 LARP6Q9BRS8 491 aaKnown RBP11.62□□□□□ -0.55
CHD2-209ENST00000627185 CCDC144AA2RUR9 1427 aa11.61□□□□□ -0.55
CHD2-209ENST00000627185 EIF2AK4Q9P2K8 1649 aaKnown RBP11.61□□□□□ -0.55
CHD2-209ENST00000627185 SLC39A7Q92504 469 aa11.61□□□□□ -0.55
CHD2-209ENST00000627185 TMEM121BQ9BXQ6 578 aaPredicted RBP11.61□□□□□ -0.55
CHD2-209ENST00000627185 POTEIP0CG38 1075 aa11.6□□□□□ -0.55
CHD2-209ENST00000627185 PRDM15P57071 1507 aaPredicted RBP11.6□□□□□ -0.55
CHD2-209ENST00000627185 PTPRTO14522 1441 aa11.6□□□□□ -0.55
CHD2-209ENST00000627185 RALBP1Q15311 655 aa11.59□□□□□ -0.55
CHD2-209ENST00000627185 E2F4Q16254 413 aa11.59□□□□□ -0.55
CHD2-209ENST00000627185 BOLA1Q9Y3E2 137 aa11.59□□□□□ -0.55
CHD2-209ENST00000627185 BCORL1Q5H9F3 1711 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms