RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 RPGRIP1LQ68CZ1 1315 aa10.63□□□□□ -0.71
PTP4A1-206ENST00000627002 SYNMO15061 1565 aa10.63□□□□□ -0.71
PTP4A1-206ENST00000627002 ZMYM3Q14202 1370 aa10.63□□□□□ -0.71
PTP4A1-206ENST00000627002 CLTCQ00610 1675 aaKnown RBP10.63□□□□□ -0.71
PTP4A1-206ENST00000627002 PIK3C2BO00750 1634 aa10.62□□□□□ -0.71
PTP4A1-206ENST00000627002 MYOM2P54296 1465 aa10.62□□□□□ -0.71
PTP4A1-206ENST00000627002 CHGAP10645 457 aaKnown RBP10.62□□□□□ -0.71
PTP4A1-206ENST00000627002 HSPA5P11021 654 aaKnown RBP10.62□□□□□ -0.71
PTP4A1-206ENST00000627002 PREX1Q8TCU6 1659 aa10.62□□□□□ -0.71
PTP4A1-206ENST00000627002 ROCK2O75116 1388 aaKnown RBP10.62□□□□□ -0.71
PTP4A1-206ENST00000627002 SPATA31D1Q6ZQQ2 1576 aa10.61□□□□□ -0.71
PTP4A1-206ENST00000627002 IDI1Q13907 227 aa10.61□□□□□ -0.71
PTP4A1-206ENST00000627002 CARD11Q9BXL7 1154 aa10.61□□□□□ -0.71
PTP4A1-206ENST00000627002 KIF1BO60333 1816 aa10.61□□□□□ -0.71
PTP4A1-206ENST00000627002 FBXO31Q5XUX0 539 aaPredicted RBP10.6□□□□□ -0.71
PTP4A1-206ENST00000627002 GPRASP1Q5JY77 1395 aa10.6□□□□□ -0.71
PTP4A1-206ENST00000627002 USP47Q96K76 1375 aa10.59□□□□□ -0.71
PTP4A1-206ENST00000627002 LMTK3Q96Q04 1460 aa10.59□□□□□ -0.71
PTP4A1-206ENST00000627002 MROH2AA6NES4 1674 aa10.59□□□□□ -0.71
PTP4A1-206ENST00000627002 TRPM1Q7Z4N2 1603 aa10.58□□□□□ -0.72
PTP4A1-206ENST00000627002 MADDQ8WXG6 1647 aa10.58□□□□□ -0.72
PTP4A1-206ENST00000627002 NRXN1Q9ULB1 1477 aa10.58□□□□□ -0.72
PTP4A1-206ENST00000627002 LAMC1P11047 1609 aa10.58□□□□□ -0.72
PTP4A1-206ENST00000627002 ADAMTSL3P82987 1691 aa10.57□□□□□ -0.72
PTP4A1-206ENST00000627002 TNRQ92752 1358 aa10.57□□□□□ -0.72
PTP4A1-206ENST00000627002 VGFO15240 615 aaPredicted RBP10.57□□□□□ -0.72
PTP4A1-206ENST00000627002 CERKQ8TCT0 537 aa10.57□□□□□ -0.72
PTP4A1-206ENST00000627002 HIRIP3Q9BW71 556 aaPredicted RBP10.57□□□□□ -0.72
PTP4A1-206ENST00000627002 HSPA2P54652 639 aa10.56□□□□□ -0.72
PTP4A1-206ENST00000627002 STAG3Q9UJ98 1225 aa10.56□□□□□ -0.72
PTP4A1-206ENST00000627002 ZFYVE9O95405 1425 aa10.56□□□□□ -0.72
PTP4A1-206ENST00000627002 ADGRF5Q8IZF2 1346 aa10.56□□□□□ -0.72
PTP4A1-206ENST00000627002 NBPF1Q3BBV0 1214 aa10.55□□□□□ -0.72
PTP4A1-206ENST00000627002 IFT172Q9UG01 1749 aa10.55□□□□□ -0.72
PTP4A1-206ENST00000627002 TMEM131LA2VDJ0 1609 aa10.55□□□□□ -0.72
PTP4A1-206ENST00000627002 NEXMIFQ5QGS0 1516 aa10.54□□□□□ -0.72
PTP4A1-206ENST00000627002 PIK3C2GO75747 1445 aa10.54□□□□□ -0.72
PTP4A1-206ENST00000627002 NLRP1Q9C000 1473 aa10.54□□□□□ -0.72
PTP4A1-206ENST00000627002 KIAA1210Q9ULL0 1709 aa10.53□□□□□ -0.72
PTP4A1-206ENST00000627002 A2ML1A8K2U0 1454 aa10.53□□□□□ -0.72
PTP4A1-206ENST00000627002 PPLO60437 1756 aa10.52□□□□□ -0.72
PTP4A1-206ENST00000627002 CAPN15O75808 1086 aa10.52□□□□□ -0.73
PTP4A1-206ENST00000627002 HDGFP51858 240 aaKnown RBP10.52□□□□□ -0.73
PTP4A1-206ENST00000627002 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.52□□□□□ -0.73
PTP4A1-206ENST00000627002 SCAF11Q99590 1463 aaKnown RBP10.52□□□□□ -0.73
PTP4A1-206ENST00000627002 FER1L4A9Z1Z3 1794 aa10.52□□□□□ -0.73
PTP4A1-206ENST00000627002 EIF3AQ14152 1382 aaKnown RBP10.52□□□□□ -0.73
PTP4A1-206ENST00000627002 CCDC7Q96M83 1385 aa10.52□□□□□ -0.73
PTP4A1-206ENST00000627002 CFAP65Q6ZU64 1925 aaKnown RBP10.51□□□□□ -0.73
PTP4A1-206ENST00000627002 ST20-MTHFSA0A0A6YYL1 179 aa10.51□□□□□ -0.73
PTP4A1-206ENST00000627002 DDX10Q13206 875 aaKnown RBP10.51□□□□□ -0.73
PTP4A1-206ENST00000627002 CFAP70Q5T0N1 1121 aa10.51□□□□□ -0.73
PTP4A1-206ENST00000627002 C14orf93Q9H972 538 aaKnown RBP10.51□□□□□ -0.73
PTP4A1-206ENST00000627002 WASHC2AQ641Q2 1341 aa10.51□□□□□ -0.73
PTP4A1-206ENST00000627002 SETBP1Q9Y6X0 1596 aa10.51□□□□□ -0.73
PTP4A1-206ENST00000627002 DISP3Q9P2K9 1392 aa10.51□□□□□ -0.73
PTP4A1-206ENST00000627002 SLC24A1O60721 1099 aa10.5□□□□□ -0.73
PTP4A1-206ENST00000627002 DSG3P32926 999 aa10.5□□□□□ -0.73
PTP4A1-206ENST00000627002 KDM5AP29375 1690 aaKnown RBP10.5□□□□□ -0.73
PTP4A1-206ENST00000627002 RIMS2Q9UQ26 1411 aa10.5□□□□□ -0.73
PTP4A1-206ENST00000627002 CEBPAP49715 358 aaPredicted RBP10.49□□□□□ -0.73
PTP4A1-206ENST00000627002 C3P01024 1663 aa10.49□□□□□ -0.73
PTP4A1-206ENST00000627002 KIF7Q2M1P5 1343 aa10.49□□□□□ -0.73
PTP4A1-206ENST00000627002 C11orf95C9JLR9 678 aaPredicted RBP10.48□□□□□ -0.73
PTP4A1-206ENST00000627002 SOCS7O14512 581 aa10.48□□□□□ -0.73
PTP4A1-206ENST00000627002 ZBTB22O15209 634 aa10.47□□□□□ -0.73
PTP4A1-206ENST00000627002 NUTM2DQ5VT03 806 aaPredicted RBP10.47□□□□□ -0.73
PTP4A1-206ENST00000627002 TMEM2Q9UHN6 1383 aa10.47□□□□□ -0.73
PTP4A1-206ENST00000627002 IQGAP1P46940 1657 aa10.47□□□□□ -0.73
PTP4A1-206ENST00000627002 RIMS1Q86UR5 1692 aaKnown RBP10.47□□□□□ -0.73
PTP4A1-206ENST00000627002 TMF1P82094 1093 aa10.46□□□□□ -0.73
PTP4A1-206ENST00000627002 TESK2Q96S53 571 aa10.46□□□□□ -0.73
PTP4A1-206ENST00000627002 ADGRB1O14514 1584 aa10.46□□□□□ -0.74
PTP4A1-206ENST00000627002 CDCA8Q53HL2 280 aa10.45□□□□□ -0.74
PTP4A1-206ENST00000627002 MIER1Q8N108 512 aa10.45□□□□□ -0.74
PTP4A1-206ENST00000627002 THEMISQ8N1K5 641 aaPredicted RBP10.45□□□□□ -0.74
PTP4A1-206ENST00000627002 UBR1Q8IWV7 1749 aa10.44□□□□□ -0.74
PTP4A1-206ENST00000627002 MYCNP04198 464 aaPredicted RBP10.44□□□□□ -0.74
PTP4A1-206ENST00000627002 EID1Q9Y6B2 187 aa10.44□□□□□ -0.74
PTP4A1-206ENST00000627002 MYO5BQ9ULV0 1848 aa10.44□□□□□ -0.74
PTP4A1-206ENST00000627002 POLR1AO95602 1720 aaPredicted RBP10.44□□□□□ -0.74
PTP4A1-206ENST00000627002 SBNO2Q9Y2G9 1366 aa10.43□□□□□ -0.74
PTP4A1-206ENST00000627002 ANP32CO43423 234 aa10.43□□□□□ -0.74
PTP4A1-206ENST00000627002 ILDR2Q71H61 639 aa10.43□□□□□ -0.74
PTP4A1-206ENST00000627002 FOXD4L1Q9NU39 408 aa10.43□□□□□ -0.74
PTP4A1-206ENST00000627002 SLIT1O75093 1534 aa10.43□□□□□ -0.74
PTP4A1-206ENST00000627002 ARHGAP23Q9P227 1491 aa10.42□□□□□ -0.74
PTP4A1-206ENST00000627002 CENPJQ9HC77 1338 aaPredicted RBP10.42□□□□□ -0.74
PTP4A1-206ENST00000627002 TMEM132EQ6IEE7 984 aa10.42□□□□□ -0.74
PTP4A1-206ENST00000627002 POLR3GLQ9BT43 218 aa10.42□□□□□ -0.74
PTP4A1-206ENST00000627002 TRAK1Q9UPV9 953 aa10.42□□□□□ -0.74
PTP4A1-206ENST00000627002 MYO3AQ8NEV4 1616 aa10.42□□□□□ -0.74
PTP4A1-206ENST00000627002 ALKQ9UM73 1620 aa10.42□□□□□ -0.74
PTP4A1-206ENST00000627002 PLEKHG1Q9ULL1 1385 aa10.41□□□□□ -0.74
PTP4A1-206ENST00000627002 CEP170BQ9Y4F5 1589 aaPredicted RBP10.4□□□□□ -0.74
PTP4A1-206ENST00000627002 ASXL1Q8IXJ9 1541 aa10.4□□□□□ -0.74
PTP4A1-206ENST00000627002 TXNDC2Q86VQ3 553 aa10.4□□□□□ -0.74
PTP4A1-206ENST00000627002 YTHDC2Q9H6S0 1430 aaKnown RBP10.4□□□□□ -0.75
PTP4A1-206ENST00000627002 LRPPRCP42704 1394 aaKnown RBP10.39□□□□□ -0.75
PTP4A1-206ENST00000627002 SAMD1Q6SPF0 538 aaPredicted RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms