RNA–Protein interactions for RNA: ENST00000626236.2

SGMS1-211, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-211ENST00000626236 TMEM131LA2VDJ0 1609 aa12.4□□□□□ -0.42
SGMS1-211ENST00000626236 CLSPNQ9HAW4 1339 aa12.39□□□□□ -0.43
SGMS1-211ENST00000626236 CEP170BQ9Y4F5 1589 aaPredicted RBP12.39□□□□□ -0.43
SGMS1-211ENST00000626236 NEUROD1Q13562 356 aa12.39□□□□□ -0.43
SGMS1-211ENST00000626236 IDI1Q13907 227 aa12.39□□□□□ -0.43
SGMS1-211ENST00000626236 CHGAP10645 457 aaKnown RBP12.38□□□□□ -0.43
SGMS1-211ENST00000626236 A2ML1A8K2U0 1454 aa12.38□□□□□ -0.43
SGMS1-211ENST00000626236 UHRF1BP1Q6BDS2 1440 aa12.37□□□□□ -0.43
SGMS1-211ENST00000626236 STAG3Q9UJ98 1225 aa12.36□□□□□ -0.43
SGMS1-211ENST00000626236 NEURL4Q96JN8 1562 aa12.35□□□□□ -0.43
SGMS1-211ENST00000626236 IFT172Q9UG01 1749 aa12.35□□□□□ -0.43
SGMS1-211ENST00000626236 PPLO60437 1756 aa12.35□□□□□ -0.43
SGMS1-211ENST00000626236 SPATA31E1Q6ZUB1 1445 aa12.35□□□□□ -0.43
SGMS1-211ENST00000626236 RGL3Q3MIN7 710 aa12.33□□□□□ -0.44
SGMS1-211ENST00000626236 ZNF326Q5BKZ1 582 aaKnown RBP12.33□□□□□ -0.44
SGMS1-211ENST00000626236 TONSLQ96HA7 1378 aa12.32□□□□□ -0.44
SGMS1-211ENST00000626236 NEXMIFQ5QGS0 1516 aa12.32□□□□□ -0.44
SGMS1-211ENST00000626236 LMTK3Q96Q04 1460 aa12.31□□□□□ -0.44
SGMS1-211ENST00000626236 MYCNP04198 464 aaPredicted RBP12.3□□□□□ -0.44
SGMS1-211ENST00000626236 THEMISQ8N1K5 641 aaPredicted RBP12.3□□□□□ -0.44
SGMS1-211ENST00000626236 POLR1AO95602 1720 aaPredicted RBP12.3□□□□□ -0.44
SGMS1-211ENST00000626236 SLIT1O75093 1534 aa12.3□□□□□ -0.44
SGMS1-211ENST00000626236 RIMS2Q9UQ26 1411 aa12.29□□□□□ -0.44
SGMS1-211ENST00000626236 TMEM2Q9UHN6 1383 aa12.29□□□□□ -0.44
SGMS1-211ENST00000626236 ARHGAP23Q9P227 1491 aa12.28□□□□□ -0.44
SGMS1-211ENST00000626236 DCAF11Q8TEB1 546 aa12.28□□□□□ -0.44
SGMS1-211ENST00000626236 L3MBTL2Q969R5 705 aa12.28□□□□□ -0.44
SGMS1-211ENST00000626236 ZFYVE9O95405 1425 aa12.28□□□□□ -0.44
SGMS1-211ENST00000626236 NUTM2DQ5VT03 806 aaPredicted RBP12.27□□□□□ -0.45
SGMS1-211ENST00000626236 RPGRIP1LQ68CZ1 1315 aa12.27□□□□□ -0.45
SGMS1-211ENST00000626236 MYOM2P54296 1465 aa12.27□□□□□ -0.45
SGMS1-211ENST00000626236 PPP1R15AO75807 674 aaPredicted RBP12.26□□□□□ -0.45
SGMS1-211ENST00000626236 C1QBPQ07021 282 aaKnown RBP12.26□□□□□ -0.45
SGMS1-211ENST00000626236 KDM2AQ9Y2K7 1162 aa12.26□□□□□ -0.45
SGMS1-211ENST00000626236 HSPA2P54652 639 aa12.25□□□□□ -0.45
SGMS1-211ENST00000626236 IQGAP1P46940 1657 aa12.25□□□□□ -0.45
SGMS1-211ENST00000626236 HDGFP51858 240 aaKnown RBP12.24□□□□□ -0.45
SGMS1-211ENST00000626236 STRCQ7RTU9 1775 aa12.24□□□□□ -0.45
SGMS1-211ENST00000626236 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.24□□□□□ -0.45
SGMS1-211ENST00000626236 SCAF11Q99590 1463 aaKnown RBP12.24□□□□□ -0.45
SGMS1-211ENST00000626236 TIMELESSQ9UNS1 1208 aa12.24□□□□□ -0.45
SGMS1-211ENST00000626236 EID1Q9Y6B2 187 aa12.24□□□□□ -0.45
SGMS1-211ENST00000626236 VGFO15240 615 aaPredicted RBP12.23□□□□□ -0.45
SGMS1-211ENST00000626236 LTKP29376 864 aa12.23□□□□□ -0.45
SGMS1-211ENST00000626236 TXNDC2Q86VQ3 553 aa12.23□□□□□ -0.45
SGMS1-211ENST00000626236 NRXN1Q9ULB1 1477 aa12.22□□□□□ -0.45
SGMS1-211ENST00000626236 ADGRF5Q8IZF2 1346 aa12.22□□□□□ -0.45
SGMS1-211ENST00000626236 ANKLE2Q86XL3 938 aa12.22□□□□□ -0.45
SGMS1-211ENST00000626236 NRXN3Q9Y4C0 1643 aa12.22□□□□□ -0.45
SGMS1-211ENST00000626236 NCKAP5LQ9HCH0 1330 aa12.21□□□□□ -0.45
SGMS1-211ENST00000626236 LAMC1P11047 1609 aa12.21□□□□□ -0.46
SGMS1-211ENST00000626236 TRPM1Q7Z4N2 1603 aa12.21□□□□□ -0.46
SGMS1-211ENST00000626236 SETBP1Q9Y6X0 1596 aa12.21□□□□□ -0.46
SGMS1-211ENST00000626236 PIK3C2GO75747 1445 aa12.2□□□□□ -0.46
SGMS1-211ENST00000626236 PRAG1Q86YV5 1406 aa12.2□□□□□ -0.46
SGMS1-211ENST00000626236 PLEKHG1Q9ULL1 1385 aa12.2□□□□□ -0.46
SGMS1-211ENST00000626236 CACNB1Q02641 598 aaPredicted RBP12.2□□□□□ -0.46
SGMS1-211ENST00000626236 BCANQ96GW7 911 aa12.2□□□□□ -0.46
SGMS1-211ENST00000626236 STAC3Q96MF2 364 aa12.2□□□□□ -0.46
SGMS1-211ENST00000626236 SETD1AO15047 1707 aaKnown RBP12.2□□□□□ -0.46
SGMS1-211ENST00000626236 KIAA1210Q9ULL0 1709 aa12.2□□□□□ -0.46
SGMS1-211ENST00000626236 ZEB1P37275 1124 aaPredicted RBP12.19□□□□□ -0.46
SGMS1-211ENST00000626236 MED14O60244 1454 aa12.19□□□□□ -0.46
SGMS1-211ENST00000626236 NPHP4O75161 1426 aaPredicted RBP12.19□□□□□ -0.46
SGMS1-211ENST00000626236 ALKQ9UM73 1620 aa12.19□□□□□ -0.46
SGMS1-211ENST00000626236 DIP2AQ14689 1571 aa12.18□□□□□ -0.46
SGMS1-211ENST00000626236 NBPF8Q3BBV2 869 aa12.17□□□□□ -0.46
SGMS1-211ENST00000626236 SPINK5Q9NQ38 1064 aaPredicted RBP12.17□□□□□ -0.46
SGMS1-211ENST00000626236 RALGAPBQ86X10 1494 aa12.15□□□□□ -0.46
SGMS1-211ENST00000626236 ADAMTS13Q76LX8 1427 aa12.15□□□□□ -0.46
SGMS1-211ENST00000626236 CFAP70Q5T0N1 1121 aa12.15□□□□□ -0.46
SGMS1-211ENST00000626236 SLC26A8Q96RN1 970 aa12.15□□□□□ -0.46
SGMS1-211ENST00000626236 ASXL1Q8IXJ9 1541 aa12.14□□□□□ -0.47
SGMS1-211ENST00000626236 SAMD1Q6SPF0 538 aaPredicted RBP12.13□□□□□ -0.47
SGMS1-211ENST00000626236 C14orf93Q9H972 538 aaKnown RBP12.13□□□□□ -0.47
SGMS1-211ENST00000626236 ROCK2O75116 1388 aaKnown RBP12.13□□□□□ -0.47
SGMS1-211ENST00000626236 ADGRB1O14514 1584 aa12.13□□□□□ -0.47
SGMS1-211ENST00000626236 CHD2O14647 1828 aaKnown RBP12.12□□□□□ -0.47
SGMS1-211ENST00000626236 ATF5Q9Y2D1 282 aaPredicted RBP12.12□□□□□ -0.47
SGMS1-211ENST00000626236 METP08581 1390 aa12.11□□□□□ -0.47
SGMS1-211ENST00000626236 NBPF1Q3BBV0 1214 aa12.11□□□□□ -0.47
SGMS1-211ENST00000626236 TMEM132EQ6IEE7 984 aa12.11□□□□□ -0.47
SGMS1-211ENST00000626236 TBX22Q9Y458 520 aa12.11□□□□□ -0.47
SGMS1-211ENST00000626236 KNDC1Q76NI1 1749 aa12.11□□□□□ -0.47
SGMS1-211ENST00000626236 XRN1Q8IZH2 1706 aaKnown RBP12.09□□□□□ -0.47
SGMS1-211ENST00000626236 ARHGEF28Q8N1W1 1705 aaKnown RBP12.09□□□□□ -0.47
SGMS1-211ENST00000626236 CAPN15O75808 1086 aa12.09□□□□□ -0.47
SGMS1-211ENST00000626236 STRCP1A6NGW2 1772 aa12.09□□□□□ -0.47
SGMS1-211ENST00000626236 CARD11Q9BXL7 1154 aa12.08□□□□□ -0.48
SGMS1-211ENST00000626236 PTPRUQ92729 1446 aa12.08□□□□□ -0.48
SGMS1-211ENST00000626236 YTHDC2Q9H6S0 1430 aaKnown RBP12.08□□□□□ -0.48
SGMS1-211ENST00000626236 NWD1Q149M9 1564 aa12.08□□□□□ -0.48
SGMS1-211ENST00000626236 GPRASP1Q5JY77 1395 aa12.07□□□□□ -0.48
SGMS1-211ENST00000626236 PIK3R4Q99570 1358 aa12.07□□□□□ -0.48
SGMS1-211ENST00000626236 STK26Q9P289 416 aa12.07□□□□□ -0.48
SGMS1-211ENST00000626236 CPS1P31327 1500 aa12.06□□□□□ -0.48
SGMS1-211ENST00000626236 LRPPRCP42704 1394 aaKnown RBP12.06□□□□□ -0.48
SGMS1-211ENST00000626236 TRAK1Q9UPV9 953 aa12.05□□□□□ -0.48
SGMS1-211ENST00000626236 AMOTL2Q9Y2J4 779 aa12.05□□□□□ -0.48
SGMS1-211ENST00000626236 QRICH2Q9H0J4 1663 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms