RNA–Protein interactions for RNA: ENST00000626177.2

CCDC163-202, Transcript of coiled-coil domain containing 163, humanhuman

TSL 1 (best)

Gene CCDC163, Length 2,229 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163-202ENST00000626177 POLR1AO95602 1720 aaPredicted RBP12.68□□□□□ -0.38
CCDC163-202ENST00000626177 CCDC184Q52MB2 194 aa12.67□□□□□ -0.38
CCDC163-202ENST00000626177 CFAP70Q5T0N1 1121 aa12.67□□□□□ -0.38
CCDC163-202ENST00000626177 FBXO31Q5XUX0 539 aaPredicted RBP12.67□□□□□ -0.38
CCDC163-202ENST00000626177 NUTM2DQ5VT03 806 aaPredicted RBP12.66□□□□□ -0.38
CCDC163-202ENST00000626177 KIF1BO60333 1816 aa12.66□□□□□ -0.38
CCDC163-202ENST00000626177 NOS1P29475 1434 aa12.66□□□□□ -0.38
CCDC163-202ENST00000626177 CCER2I3L3R5 266 aa12.66□□□□□ -0.38
CCDC163-202ENST00000626177 TESK2Q96S53 571 aa12.66□□□□□ -0.38
CCDC163-202ENST00000626177 SYNMO15061 1565 aa12.65□□□□□ -0.38
CCDC163-202ENST00000626177 IDI1Q13907 227 aa12.65□□□□□ -0.38
CCDC163-202ENST00000626177 SENP3Q9H4L4 574 aaPredicted RBP12.64□□□□□ -0.39
CCDC163-202ENST00000626177 ADGRB3O60242 1522 aa12.64□□□□□ -0.39
CCDC163-202ENST00000626177 DISP3Q9P2K9 1392 aa12.64□□□□□ -0.39
CCDC163-202ENST00000626177 PRKRIP1Q9H875 184 aaPredicted RBP12.64□□□□□ -0.39
CCDC163-202ENST00000626177 LAMC1P11047 1609 aa12.63□□□□□ -0.39
CCDC163-202ENST00000626177 NEURL4Q96JN8 1562 aa12.62□□□□□ -0.39
CCDC163-202ENST00000626177 IFT172Q9UG01 1749 aa12.62□□□□□ -0.39
CCDC163-202ENST00000626177 ARHGAP31Q2M1Z3 1444 aa12.62□□□□□ -0.39
CCDC163-202ENST00000626177 ARID4BQ4LE39 1312 aaPredicted RBP12.62□□□□□ -0.39
CCDC163-202ENST00000626177 HAP1P54257 671 aaPredicted RBP12.61□□□□□ -0.39
CCDC163-202ENST00000626177 STAC3Q96MF2 364 aa12.61□□□□□ -0.39
CCDC163-202ENST00000626177 ZC3H13Q5T200 1668 aaKnown RBP12.6□□□□□ -0.39
CCDC163-202ENST00000626177 MYOM2P54296 1465 aa12.6□□□□□ -0.39
CCDC163-202ENST00000626177 GTF3C3Q9Y5Q9 886 aa12.6□□□□□ -0.39
CCDC163-202ENST00000626177 PIK3C2BO00750 1634 aa12.6□□□□□ -0.39
CCDC163-202ENST00000626177 AGLP35573 1532 aa12.6□□□□□ -0.39
CCDC163-202ENST00000626177 TRHP20396 242 aaPredicted RBP12.6□□□□□ -0.39
CCDC163-202ENST00000626177 REREQ9P2R6 1566 aa12.59□□□□□ -0.39
CCDC163-202ENST00000626177 IQGAP1P46940 1657 aa12.59□□□□□ -0.39
CCDC163-202ENST00000626177 NRXN1Q9ULB1 1477 aa12.59□□□□□ -0.39
CCDC163-202ENST00000626177 ARHGEF40Q8TER5 1519 aa12.59□□□□□ -0.39
CCDC163-202ENST00000626177 CLTCQ00610 1675 aaKnown RBP12.58□□□□□ -0.39
CCDC163-202ENST00000626177 PREX1Q8TCU6 1659 aa12.58□□□□□ -0.39
CCDC163-202ENST00000626177 TMEM132EQ6IEE7 984 aa12.58□□□□□ -0.39
CCDC163-202ENST00000626177 SCAF11Q99590 1463 aaKnown RBP12.58□□□□□ -0.4
CCDC163-202ENST00000626177 PPLO60437 1756 aa12.57□□□□□ -0.4
CCDC163-202ENST00000626177 PELP1Q8IZL8 1130 aaKnown RBP12.57□□□□□ -0.4
CCDC163-202ENST00000626177 C14orf93Q9H972 538 aaKnown RBP12.56□□□□□ -0.4
CCDC163-202ENST00000626177 TMF1P82094 1093 aa12.56□□□□□ -0.4
CCDC163-202ENST00000626177 SLC52A1Q9NWF4 448 aa12.56□□□□□ -0.4
CCDC163-202ENST00000626177 MYO5BQ9ULV0 1848 aa12.55□□□□□ -0.4
CCDC163-202ENST00000626177 ERVK-7P63135 1459 aa12.55□□□□□ -0.4
CCDC163-202ENST00000626177 PIK3C2GO75747 1445 aa12.55□□□□□ -0.4
CCDC163-202ENST00000626177 KIAA1210Q9ULL0 1709 aa12.55□□□□□ -0.4
CCDC163-202ENST00000626177 NEXMIFQ5QGS0 1516 aa12.55□□□□□ -0.4
CCDC163-202ENST00000626177 RPGRIP1LQ68CZ1 1315 aa12.54□□□□□ -0.4
CCDC163-202ENST00000626177 PANK3Q9H999 370 aa12.54□□□□□ -0.4
CCDC163-202ENST00000626177 TRAK1Q9UPV9 953 aa12.54□□□□□ -0.4
CCDC163-202ENST00000626177 PER1O15534 1290 aaPredicted RBP12.53□□□□□ -0.4
CCDC163-202ENST00000626177 MRS2Q9HD23 443 aa12.53□□□□□ -0.4
CCDC163-202ENST00000626177 PPP6R1Q9UPN7 881 aa12.53□□□□□ -0.4
CCDC163-202ENST00000626177 TMEM131LA2VDJ0 1609 aa12.53□□□□□ -0.4
CCDC163-202ENST00000626177 FAM9BQ8IZU0 186 aa12.52□□□□□ -0.41
CCDC163-202ENST00000626177 ZMYM3Q14202 1370 aa12.52□□□□□ -0.41
CCDC163-202ENST00000626177 VGFO15240 615 aaPredicted RBP12.52□□□□□ -0.41
CCDC163-202ENST00000626177 ADGRB1O14514 1584 aa12.51□□□□□ -0.41
CCDC163-202ENST00000626177 STAG3Q9UJ98 1225 aa12.5□□□□□ -0.41
CCDC163-202ENST00000626177 ESF1Q9H501 851 aaKnown RBP12.49□□□□□ -0.41
CCDC163-202ENST00000626177 CEBPAP49715 358 aaPredicted RBP12.49□□□□□ -0.41
CCDC163-202ENST00000626177 CC2D1BQ5T0F9 858 aaKnown RBP12.49□□□□□ -0.41
CCDC163-202ENST00000626177 SPATA31D1Q6ZQQ2 1576 aa12.48□□□□□ -0.41
CCDC163-202ENST00000626177 EIF3AQ14152 1382 aaKnown RBP12.48□□□□□ -0.41
CCDC163-202ENST00000626177 HNRNPUQ00839 825 aaKnown RBP eCLIP12.48□□□□□ -0.41
CCDC163-202ENST00000626177 SETBP1Q9Y6X0 1596 aa12.48□□□□□ -0.41
CCDC163-202ENST00000626177 ERICH6Q7L0X2 663 aa12.47□□□□□ -0.41
CCDC163-202ENST00000626177 STK26Q9P289 416 aa12.47□□□□□ -0.41
CCDC163-202ENST00000626177 SENP3-EIF4A1A0A087X0R7 540 aa12.47□□□□□ -0.41
CCDC163-202ENST00000626177 CENPJQ9HC77 1338 aaPredicted RBP12.47□□□□□ -0.41
CCDC163-202ENST00000626177 A2ML1A8K2U0 1454 aa12.46□□□□□ -0.41
CCDC163-202ENST00000626177 SAFB2Q14151 953 aaKnown RBP eCLIP12.46□□□□□ -0.42
CCDC163-202ENST00000626177 DNAJC5Q9H3Z4 198 aa12.46□□□□□ -0.42
CCDC163-202ENST00000626177 ZFYVE9O95405 1425 aa12.45□□□□□ -0.42
CCDC163-202ENST00000626177 ASXL1Q8IXJ9 1541 aa12.45□□□□□ -0.42
CCDC163-202ENST00000626177 KLHL34Q8N239 644 aa12.45□□□□□ -0.42
CCDC163-202ENST00000626177 PODXL2Q9NZ53 605 aa12.45□□□□□ -0.42
CCDC163-202ENST00000626177 RALBP1Q15311 655 aa12.43□□□□□ -0.42
CCDC163-202ENST00000626177 MYO3AQ8NEV4 1616 aa12.43□□□□□ -0.42
CCDC163-202ENST00000626177 MYOM1P52179 1685 aa12.43□□□□□ -0.42
CCDC163-202ENST00000626177 MYBBP1AQ9BQG0 1328 aaKnown RBP12.43□□□□□ -0.42
CCDC163-202ENST00000626177 KTN1Q86UP2 1357 aaKnown RBP12.43□□□□□ -0.42
CCDC163-202ENST00000626177 PARD3Q8TEW0 1356 aa12.43□□□□□ -0.42
CCDC163-202ENST00000626177 CDCA8Q53HL2 280 aa12.42□□□□□ -0.42
CCDC163-202ENST00000626177 PNISRQ8TF01 805 aaKnown RBP12.42□□□□□ -0.42
CCDC163-202ENST00000626177 RIMS2Q9UQ26 1411 aa12.42□□□□□ -0.42
CCDC163-202ENST00000626177 TNRQ92752 1358 aa12.42□□□□□ -0.42
CCDC163-202ENST00000626177 TMC1Q8TDI8 760 aa12.42□□□□□ -0.42
CCDC163-202ENST00000626177 QRICH2Q9H0J4 1663 aa12.41□□□□□ -0.42
CCDC163-202ENST00000626177 CARD14Q9BXL6 1004 aa12.41□□□□□ -0.42
CCDC163-202ENST00000626177 KDM5AP29375 1690 aaKnown RBP12.41□□□□□ -0.42
CCDC163-202ENST00000626177 ALKQ9UM73 1620 aa12.4□□□□□ -0.42
CCDC163-202ENST00000626177 ARHGEF28Q8N1W1 1705 aaKnown RBP12.4□□□□□ -0.42
CCDC163-202ENST00000626177 SLC12A5Q9H2X9 1139 aa12.4□□□□□ -0.42
CCDC163-202ENST00000626177 KNSTRNQ9Y448 316 aa12.4□□□□□ -0.42
CCDC163-202ENST00000626177 PTPRMP28827 1452 aa12.4□□□□□ -0.42
CCDC163-202ENST00000626177 SBNO2Q9Y2G9 1366 aa12.4□□□□□ -0.42
CCDC163-202ENST00000626177 CABP2Q9NPB3 220 aa12.39□□□□□ -0.43
CCDC163-202ENST00000626177 PRAM1Q96QH2 718 aa12.38□□□□□ -0.43
CCDC163-202ENST00000626177 YTHDC2Q9H6S0 1430 aaKnown RBP12.38□□□□□ -0.43
CCDC163-202ENST00000626177 FKBP8Q14318 412 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms