RNA–Protein interactions for RNA: ENST00000625767.1

CCNA1-203, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-203ENST00000625767 LMTK3Q96Q04 1460 aa23.94■■□□□ 1.42
CCNA1-203ENST00000625767 RIMS2Q9UQ26 1411 aa23.94■■□□□ 1.42
CCNA1-203ENST00000625767 TMEM2Q9UHN6 1383 aa23.93■■□□□ 1.42
CCNA1-203ENST00000625767 ARHGAP23Q9P227 1491 aa23.91■■□□□ 1.42
CCNA1-203ENST00000625767 SLIT1O75093 1534 aa23.91■■□□□ 1.42
CCNA1-203ENST00000625767 THEMISQ8N1K5 641 aaPredicted RBP23.91■■□□□ 1.42
CCNA1-203ENST00000625767 ADGRF5Q8IZF2 1346 aa23.91■■□□□ 1.42
CCNA1-203ENST00000625767 HSPA2P54652 639 aa23.9■■□□□ 1.42
CCNA1-203ENST00000625767 PPP1R15AO75807 674 aaPredicted RBP23.89■■□□□ 1.42
CCNA1-203ENST00000625767 LTKP29376 864 aa23.89■■□□□ 1.42
CCNA1-203ENST00000625767 NBPF8Q3BBV2 869 aa23.89■■□□□ 1.42
CCNA1-203ENST00000625767 TIMELESSQ9UNS1 1208 aa23.89■■□□□ 1.42
CCNA1-203ENST00000625767 MYOM2P54296 1465 aa23.88■■□□□ 1.41
CCNA1-203ENST00000625767 RPGRIP1LQ68CZ1 1315 aa23.88■■□□□ 1.41
CCNA1-203ENST00000625767 PRAG1Q86YV5 1406 aa23.86■■□□□ 1.41
CCNA1-203ENST00000625767 NRXN1Q9ULB1 1477 aa23.85■■□□□ 1.41
CCNA1-203ENST00000625767 POLR1AO95602 1720 aaPredicted RBP23.84■■□□□ 1.41
CCNA1-203ENST00000625767 TXNDC2Q86VQ3 553 aa23.83■■□□□ 1.41
CCNA1-203ENST00000625767 IQGAP1P46940 1657 aa23.83■■□□□ 1.41
CCNA1-203ENST00000625767 ZEB1P37275 1124 aaPredicted RBP23.83■■□□□ 1.4
CCNA1-203ENST00000625767 NRXN3Q9Y4C0 1643 aa23.82■■□□□ 1.4
CCNA1-203ENST00000625767 SCAF11Q99590 1463 aaKnown RBP23.82■■□□□ 1.4
CCNA1-203ENST00000625767 TRPM1Q7Z4N2 1603 aa23.82■■□□□ 1.4
CCNA1-203ENST00000625767 PIK3C2GO75747 1445 aa23.82■■□□□ 1.4
CCNA1-203ENST00000625767 VGFO15240 615 aaPredicted RBP23.81■■□□□ 1.4
CCNA1-203ENST00000625767 NCKAP5LQ9HCH0 1330 aa23.79■■□□□ 1.4
CCNA1-203ENST00000625767 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.79■■□□□ 1.4
CCNA1-203ENST00000625767 STRCQ7RTU9 1775 aa23.78■■□□□ 1.4
CCNA1-203ENST00000625767 EID1Q9Y6B2 187 aa23.78■■□□□ 1.4
CCNA1-203ENST00000625767 SETD1AO15047 1707 aaKnown RBP23.77■■□□□ 1.4
CCNA1-203ENST00000625767 CFAP70Q5T0N1 1121 aa23.76■■□□□ 1.39
CCNA1-203ENST00000625767 ANKLE2Q86XL3 938 aa23.76■■□□□ 1.39
CCNA1-203ENST00000625767 SETBP1Q9Y6X0 1596 aa23.75■■□□□ 1.39
CCNA1-203ENST00000625767 PLEKHG1Q9ULL1 1385 aa23.75■■□□□ 1.39
CCNA1-203ENST00000625767 NBPF1Q3BBV0 1214 aa23.75■■□□□ 1.39
CCNA1-203ENST00000625767 ALKQ9UM73 1620 aa23.75■■□□□ 1.39
CCNA1-203ENST00000625767 STAC3Q96MF2 364 aa23.74■■□□□ 1.39
CCNA1-203ENST00000625767 HDGFP51858 240 aaKnown RBP23.73■■□□□ 1.39
CCNA1-203ENST00000625767 KIAA1210Q9ULL0 1709 aa23.73■■□□□ 1.39
CCNA1-203ENST00000625767 RALGAPBQ86X10 1494 aa23.73■■□□□ 1.39
CCNA1-203ENST00000625767 ASXL1Q8IXJ9 1541 aa23.73■■□□□ 1.39
CCNA1-203ENST00000625767 ADAMTS13Q76LX8 1427 aa23.72■■□□□ 1.39
CCNA1-203ENST00000625767 BCANQ96GW7 911 aa23.72■■□□□ 1.39
CCNA1-203ENST00000625767 AEBP2Q6ZN18 517 aaPredicted RBP23.71■■□□□ 1.39
CCNA1-203ENST00000625767 SLC26A8Q96RN1 970 aa23.71■■□□□ 1.39
CCNA1-203ENST00000625767 LAMC1P11047 1609 aa23.7■■□□□ 1.39
CCNA1-203ENST00000625767 C14orf93Q9H972 538 aaKnown RBP23.7■■□□□ 1.38
CCNA1-203ENST00000625767 NPHP4O75161 1426 aaPredicted RBP23.69■■□□□ 1.38
CCNA1-203ENST00000625767 MED14O60244 1454 aa23.69■■□□□ 1.38
CCNA1-203ENST00000625767 TMEM132EQ6IEE7 984 aa23.69■■□□□ 1.38
CCNA1-203ENST00000625767 ADGRB1O14514 1584 aa23.68■■□□□ 1.38
CCNA1-203ENST00000625767 ROCK2O75116 1388 aaKnown RBP23.67■■□□□ 1.38
CCNA1-203ENST00000625767 METP08581 1390 aa23.66■■□□□ 1.38
CCNA1-203ENST00000625767 DIP2AQ14689 1571 aa23.62■■□□□ 1.37
CCNA1-203ENST00000625767 GPRASP1Q5JY77 1395 aa23.62■■□□□ 1.37
CCNA1-203ENST00000625767 CARD11Q9BXL7 1154 aa23.61■■□□□ 1.37
CCNA1-203ENST00000625767 PTPRUQ92729 1446 aa23.6■■□□□ 1.37
CCNA1-203ENST00000625767 TBX22Q9Y458 520 aa23.58■■□□□ 1.37
CCNA1-203ENST00000625767 STK26Q9P289 416 aa23.57■■□□□ 1.36
CCNA1-203ENST00000625767 CHD2O14647 1828 aaKnown RBP23.57■■□□□ 1.36
CCNA1-203ENST00000625767 YTHDC2Q9H6S0 1430 aaKnown RBP23.57■■□□□ 1.36
CCNA1-203ENST00000625767 ARHGEF28Q8N1W1 1705 aaKnown RBP23.56■■□□□ 1.36
CCNA1-203ENST00000625767 HIRIP3Q9BW71 556 aaPredicted RBP23.55■■□□□ 1.36
CCNA1-203ENST00000625767 TRAK1Q9UPV9 953 aa23.55■■□□□ 1.36
CCNA1-203ENST00000625767 STRCP1A6NGW2 1772 aa23.54■■□□□ 1.36
CCNA1-203ENST00000625767 USP47Q96K76 1375 aa23.53■■□□□ 1.36
CCNA1-203ENST00000625767 XRN1Q8IZH2 1706 aaKnown RBP23.53■■□□□ 1.36
CCNA1-203ENST00000625767 KNDC1Q76NI1 1749 aa23.52■■□□□ 1.36
CCNA1-203ENST00000625767 LRPPRCP42704 1394 aaKnown RBP23.51■■□□□ 1.35
CCNA1-203ENST00000625767 AMOTL2Q9Y2J4 779 aa23.5■■□□□ 1.35
CCNA1-203ENST00000625767 HSPA5P11021 654 aaKnown RBP23.49■■□□□ 1.35
CCNA1-203ENST00000625767 CPS1P31327 1500 aa23.47■■□□□ 1.35
CCNA1-203ENST00000625767 ABCC11Q96J66 1382 aa23.47■■□□□ 1.35
CCNA1-203ENST00000625767 PIK3R4Q99570 1358 aa23.47■■□□□ 1.35
CCNA1-203ENST00000625767 ROBO2Q9HCK4 1378 aa23.47■■□□□ 1.35
CCNA1-203ENST00000625767 PLEKHH1Q9ULM0 1364 aa23.47■■□□□ 1.35
CCNA1-203ENST00000625767 KCNA6P17658 529 aa23.47■■□□□ 1.35
CCNA1-203ENST00000625767 NWD1Q149M9 1564 aa23.47■■□□□ 1.35
CCNA1-203ENST00000625767 TECPR2O15040 1411 aa23.46■■□□□ 1.35
CCNA1-203ENST00000625767 QRICH2Q9H0J4 1663 aa23.45■■□□□ 1.35
CCNA1-203ENST00000625767 ST20-MTHFSA0A0A6YYL1 179 aa23.45■■□□□ 1.34
CCNA1-203ENST00000625767 EIF4G2P78344 907 aaKnown RBP eCLIP23.45■■□□□ 1.34
CCNA1-203ENST00000625767 SAFB2Q14151 953 aaKnown RBP eCLIP23.45■■□□□ 1.34
CCNA1-203ENST00000625767 WAPLQ7Z5K2 1190 aa23.45■■□□□ 1.34
CCNA1-203ENST00000625767 ZNF335Q9H4Z2 1342 aaPredicted RBP23.44■■□□□ 1.34
CCNA1-203ENST00000625767 DLC1Q96QB1 1528 aa23.44■■□□□ 1.34
CCNA1-203ENST00000625767 RBM33Q96EV2 1170 aaKnown RBP23.43■■□□□ 1.34
CCNA1-203ENST00000625767 PRAM1Q96QH2 718 aa23.43■■□□□ 1.34
CCNA1-203ENST00000625767 DMRT2Q9Y5R5 561 aa23.41■■□□□ 1.34
CCNA1-203ENST00000625767 PTCH1Q13635 1447 aa23.4■■□□□ 1.34
CCNA1-203ENST00000625767 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.4■■□□□ 1.34
CCNA1-203ENST00000625767 EIF3AQ14152 1382 aaKnown RBP23.39■■□□□ 1.34
CCNA1-203ENST00000625767 CENPJQ9HC77 1338 aaPredicted RBP23.39■■□□□ 1.33
CCNA1-203ENST00000625767 TESK2Q96S53 571 aa23.38■■□□□ 1.33
CCNA1-203ENST00000625767 POGKQ9P215 609 aa23.38■■□□□ 1.33
CCNA1-203ENST00000625767 FAM135BQ49AJ0 1406 aa23.37■■□□□ 1.33
CCNA1-203ENST00000625767 XIRP1Q702N8 1843 aaKnown RBP23.36■■□□□ 1.33
CCNA1-203ENST00000625767 MINK1Q8N4C8 1332 aaPredicted RBP23.35■■□□□ 1.33
CCNA1-203ENST00000625767 NALCNQ8IZF0 1738 aa23.35■■□□□ 1.33
CCNA1-203ENST00000625767 NKTRP30414 1462 aaKnown RBP23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms