RNA–Protein interactions for RNA: ENST00000625364.1

PPA1-206, Transcript of pyrophosphatase (inorganic) 1, human

TSL 5 BASIC

Gene PPA1, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPA1-206	ENST00000625364	BCAN	Q96GW7	911 aa		22.74	■■□□□ 1.23
PPA1-206	ENST00000625364	CHD2	O14647	1828 aa	Known RBP	22.72	■■□□□ 1.23
PPA1-206	ENST00000625364	LRP6	O75581	1613 aa		22.7	■■□□□ 1.22
PPA1-206	ENST00000625364	ANKRD30A	Q9BXX3	1397 aa		22.69	■■□□□ 1.22
PPA1-206	ENST00000625364	MYO5B	Q9ULV0	1848 aa		22.68	■■□□□ 1.22
PPA1-206	ENST00000625364	SLC52A1	Q9NWF4	448 aa		22.68	■■□□□ 1.22
PPA1-206	ENST00000625364	FGD6	Q6ZV73	1430 aa		22.67	■■□□□ 1.22
PPA1-206	ENST00000625364	PLEKHG1	Q9ULL1	1385 aa		22.67	■■□□□ 1.22
PPA1-206	ENST00000625364	SPATA31A6	Q5VVP1	1343 aa		22.67	■■□□□ 1.22
PPA1-206	ENST00000625364	MEX3C	Q5U5Q3	659 aa	Known RBP	22.67	■■□□□ 1.22
PPA1-206	ENST00000625364	ZFYVE9	O95405	1425 aa		22.66	■■□□□ 1.22
PPA1-206	ENST00000625364	ZNF772	Q68DY9	489 aa	Predicted RBP	22.65	■■□□□ 1.22
PPA1-206	ENST00000625364	UPF1	Q92900	1129 aa	Known RBP eCLIP	22.65	■■□□□ 1.22
PPA1-206	ENST00000625364	CHIC2	Q9UKJ5	165 aa		22.65	■■□□□ 1.22
PPA1-206	ENST00000625364	GCC2	Q8IWJ2	1684 aa		22.65	■■□□□ 1.22
PPA1-206	ENST00000625364	PPP1R15A	O75807	674 aa	Predicted RBP	22.64	■■□□□ 1.21
PPA1-206	ENST00000625364	SHPRH	Q149N8	1683 aa		22.64	■■□□□ 1.21
PPA1-206	ENST00000625364	RPRD2	Q5VT52	1461 aa	Known RBP	22.63	■■□□□ 1.21
PPA1-206	ENST00000625364	TRIM52	Q96A61	297 aa		22.63	■■□□□ 1.21
PPA1-206	ENST00000625364	AHDC1	Q5TGY3	1603 aa	Predicted RBP	22.63	■■□□□ 1.21
PPA1-206	ENST00000625364	RIMS2	Q9UQ26	1411 aa		22.63	■■□□□ 1.21
PPA1-206	ENST00000625364	NCOA3	Q9Y6Q9	1424 aa		22.63	■■□□□ 1.21
PPA1-206	ENST00000625364	C14orf37	Q86TY3	774 aa		22.62	■■□□□ 1.21
PPA1-206	ENST00000625364	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	22.6	■■□□□ 1.21
PPA1-206	ENST00000625364	HDGF	P51858	240 aa	Known RBP	22.59	■■□□□ 1.21
PPA1-206	ENST00000625364	TMEM131L	A2VDJ0	1609 aa		22.59	■■□□□ 1.21
PPA1-206	ENST00000625364	CADPS2	Q86UW7	1296 aa		22.57	■■□□□ 1.2
PPA1-206	ENST00000625364	TBX22	Q9Y458	520 aa		22.57	■■□□□ 1.2
PPA1-206	ENST00000625364	DIP2A	Q14689	1571 aa		22.56	■■□□□ 1.2
PPA1-206	ENST00000625364	ADGRL2	O95490	1459 aa		22.56	■■□□□ 1.2
PPA1-206	ENST00000625364	ATF3	P18847	181 aa		22.55	■■□□□ 1.2
PPA1-206	ENST00000625364	RXRB	P28702	533 aa		22.54	■■□□□ 1.2
PPA1-206	ENST00000625364	ADAMTS13	Q76LX8	1427 aa		22.54	■■□□□ 1.2
PPA1-206	ENST00000625364	SRCAP	Q6ZRS2	3230 aa		22.53	■■□□□ 1.2
PPA1-206	ENST00000625364	LOC105371045	A0A1W2PR82	267 aa		22.53	■■□□□ 1.2
PPA1-206	ENST00000625364	APLP2	Q06481	763 aa		22.53	■■□□□ 1.2
PPA1-206	ENST00000625364	C19orf44	Q9H6X5	657 aa		22.53	■■□□□ 1.2
PPA1-206	ENST00000625364	CDK12	Q9NYV4	1490 aa	Predicted RBP	22.53	■■□□□ 1.2
PPA1-206	ENST00000625364	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	22.52	■■□□□ 1.2
PPA1-206	ENST00000625364	PIK3R4	Q99570	1358 aa		22.51	■■□□□ 1.19
PPA1-206	ENST00000625364	ANKRD50	Q9ULJ7	1429 aa		22.51	■■□□□ 1.19
PPA1-206	ENST00000625364	CHGA	P10645	457 aa	Known RBP	22.51	■■□□□ 1.19
PPA1-206	ENST00000625364	NUTM2B	A6NNL0	878 aa	Predicted RBP	22.49	■■□□□ 1.19
PPA1-206	ENST00000625364	NUTM2E	B1AL46	878 aa	Predicted RBP	22.49	■■□□□ 1.19
PPA1-206	ENST00000625364	NUTM2A	Q8IVF1	878 aa	Predicted RBP	22.49	■■□□□ 1.19
PPA1-206	ENST00000625364	TRPM2	O94759	1503 aa		22.48	■■□□□ 1.19
PPA1-206	ENST00000625364	NUTM2D	Q5VT03	806 aa	Predicted RBP	22.48	■■□□□ 1.19
PPA1-206	ENST00000625364	BRINP3	Q76B58	766 aa		22.48	■■□□□ 1.19
PPA1-206	ENST00000625364	AFF2	P51816	1311 aa		22.46	■■□□□ 1.19
PPA1-206	ENST00000625364	ASXL1	Q8IXJ9	1541 aa		22.46	■■□□□ 1.19
PPA1-206	ENST00000625364	DCC	P43146	1447 aa		22.45	■■□□□ 1.18
PPA1-206	ENST00000625364	UNC13B	O14795	1591 aa		22.45	■■□□□ 1.18
PPA1-206	ENST00000625364		E9PCH4	1651 aa		22.44	■■□□□ 1.18
PPA1-206	ENST00000625364	NHSL1	Q5SYE7	1610 aa		22.43	■■□□□ 1.18
PPA1-206	ENST00000625364	AMOTL2	Q9Y2J4	779 aa		22.43	■■□□□ 1.18
PPA1-206	ENST00000625364	PTPRU	Q92729	1446 aa		22.42	■■□□□ 1.18
PPA1-206	ENST00000625364	SETD5	Q9C0A6	1442 aa		22.42	■■□□□ 1.18
PPA1-206	ENST00000625364	RGS12	O14924	1447 aa		22.41	■■□□□ 1.18
PPA1-206	ENST00000625364	FAM50A	Q14320	339 aa	Known RBP	22.4	■■□□□ 1.18
PPA1-206	ENST00000625364	XRN1	Q8IZH2	1706 aa	Known RBP	22.4	■■□□□ 1.18
PPA1-206	ENST00000625364	MST1R	Q04912	1400 aa		22.39	■■□□□ 1.17
PPA1-206	ENST00000625364	IQGAP3	Q86VI3	1631 aa		22.36	■■□□□ 1.17
PPA1-206	ENST00000625364	RBM6	P78332	1123 aa	Known RBP	22.36	■■□□□ 1.17
PPA1-206	ENST00000625364	C8orf37	Q96NL8	207 aa		22.36	■■□□□ 1.17
PPA1-206	ENST00000625364	NRXN3	Q9Y4C0	1643 aa		22.35	■■□□□ 1.17
PPA1-206	ENST00000625364	LRRC59	Q96AG4	307 aa	Known RBP	22.35	■■□□□ 1.17
PPA1-206	ENST00000625364	QTRT2	Q9H974	415 aa	Known RBP	22.34	■■□□□ 1.17
PPA1-206	ENST00000625364	PNPLA6	Q8IY17	1366 aa		22.34	■■□□□ 1.17
PPA1-206	ENST00000625364	SETBP1	Q9Y6X0	1596 aa		22.33	■■□□□ 1.17
PPA1-206	ENST00000625364	ADGRL3	Q9HAR2	1447 aa		22.3	■■□□□ 1.16
PPA1-206	ENST00000625364	DDX17	Q92841	729 aa	Known RBP	22.29	■■□□□ 1.16
PPA1-206	ENST00000625364	NALCN	Q8IZF0	1738 aa		22.28	■■□□□ 1.16
PPA1-206	ENST00000625364	MET	P08581	1390 aa		22.26	■■□□□ 1.15
PPA1-206	ENST00000625364	ATAD2	Q6PL18	1390 aa		22.26	■■□□□ 1.15
PPA1-206	ENST00000625364	NGLY1	Q96IV0	654 aa		22.26	■■□□□ 1.15
PPA1-206	ENST00000625364	EP400	Q96L91	3159 aa		22.26	■■□□□ 1.15
PPA1-206	ENST00000625364	ADAMTS2	O95450	1211 aa		22.25	■■□□□ 1.15
PPA1-206	ENST00000625364	NUP155	O75694	1391 aa		22.25	■■□□□ 1.15
PPA1-206	ENST00000625364	ROCK1	Q13464	1354 aa		22.25	■■□□□ 1.15
PPA1-206	ENST00000625364	SPHKAP	Q2M3C7	1700 aa		22.24	■■□□□ 1.15
PPA1-206	ENST00000625364	LAMC1	P11047	1609 aa		22.22	■■□□□ 1.15
PPA1-206	ENST00000625364	ZNF326	Q5BKZ1	582 aa	Known RBP	22.22	■■□□□ 1.15
PPA1-206	ENST00000625364	C1orf167	Q5SNV9	1468 aa		22.22	■■□□□ 1.15
PPA1-206	ENST00000625364	USP21	Q9UK80	565 aa		22.19	■■□□□ 1.14
PPA1-206	ENST00000625364	FOXD1	Q16676	465 aa		22.18	■■□□□ 1.14
PPA1-206	ENST00000625364	TRPC5	Q9UL62	973 aa	Predicted RBP	22.18	■■□□□ 1.14
PPA1-206	ENST00000625364	NEXMIF	Q5QGS0	1516 aa		22.16	■■□□□ 1.14
PPA1-206	ENST00000625364	PTCH1	Q13635	1447 aa		22.16	■■□□□ 1.14
PPA1-206	ENST00000625364	ZRANB1	Q9UGI0	708 aa		22.16	■■□□□ 1.14
PPA1-206	ENST00000625364	SOS2	Q07890	1332 aa	Predicted RBP	22.15	■■□□□ 1.14
PPA1-206	ENST00000625364	ATRN	O75882	1429 aa		22.14	■■□□□ 1.14
PPA1-206	ENST00000625364	COL22A1	Q8NFW1	1626 aa	Predicted RBP	22.13	■■□□□ 1.13
PPA1-206	ENST00000625364	CLTCL1	P53675	1640 aa		22.13	■■□□□ 1.13
PPA1-206	ENST00000625364	FNBP4	Q8N3X1	1017 aa	Predicted RBP	22.12	■■□□□ 1.13
PPA1-206	ENST00000625364	ORAI2	Q96SN7	254 aa		22.12	■■□□□ 1.13
PPA1-206	ENST00000625364	KIF1B	O60333	1816 aa		22.09	■■□□□ 1.13
PPA1-206	ENST00000625364	ROBO2	Q9HCK4	1378 aa		22.08	■■□□□ 1.12
PPA1-206	ENST00000625364	MYOM2	P54296	1465 aa		22.08	■■□□□ 1.12
PPA1-206	ENST00000625364	MARF1	Q9Y4F3	1742 aa	Known RBP	22.06	■■□□□ 1.12
PPA1-206	ENST00000625364	ITGAE	P38570	1179 aa		22.06	■■□□□ 1.12

Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms