RNA–Protein interactions for RNA: ENST00000624953.1

CDKL5-208, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 567 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-208ENST00000624953 SAMD7Q7Z3H4 446 aa7.36□□□□□ -1.23
CDKL5-208ENST00000624953 ANKK1Q8NFD2 765 aa7.36□□□□□ -1.23
CDKL5-208ENST00000624953 IRX2Q9BZI1 471 aaPredicted RBP7.36□□□□□ -1.23
CDKL5-208ENST00000624953 WBP1LQ9NX94 342 aa7.36□□□□□ -1.23
CDKL5-208ENST00000624953 SWT1Q5T5J6 900 aaKnown RBP7.35□□□□□ -1.23
CDKL5-208ENST00000624953 TRIM66O15016 1216 aa7.34□□□□□ -1.23
CDKL5-208ENST00000624953 DAXXQ9UER7 740 aaPredicted RBP7.34□□□□□ -1.23
CDKL5-208ENST00000624953 RGS20O76081 388 aa7.33□□□□□ -1.24
CDKL5-208ENST00000624953 ITGBL1O95965 494 aaPredicted RBP7.33□□□□□ -1.24
CDKL5-208ENST00000624953 SLC10A3P09131 477 aa7.33□□□□□ -1.24
CDKL5-208ENST00000624953 LRCH3Q96II8 777 aa7.33□□□□□ -1.24
CDKL5-208ENST00000624953 AK7Q96M32 723 aa7.33□□□□□ -1.24
CDKL5-208ENST00000624953 REPIN1Q9BWE0 567 aaKnown RBP7.33□□□□□ -1.24
CDKL5-208ENST00000624953 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.33□□□□□ -1.24
CDKL5-208ENST00000624953 NYAP1Q6ZVC0 841 aa7.32□□□□□ -1.24
CDKL5-208ENST00000624953 SLC24A3Q9HC58 644 aa7.32□□□□□ -1.24
CDKL5-208ENST00000624953 TSR3Q9UJK0 312 aaKnown RBP7.32□□□□□ -1.24
CDKL5-208ENST00000624953 NLRP7Q8WX94 980 aa7.31□□□□□ -1.24
CDKL5-208ENST00000624953 SLF2Q8IX21 1173 aa7.3□□□□□ -1.24
CDKL5-208ENST00000624953 FAM217BQ9NTX9 383 aaPredicted RBP7.3□□□□□ -1.24
CDKL5-208ENST00000624953 CD46P15529 392 aa7.29□□□□□ -1.24
CDKL5-208ENST00000624953 PARP9Q8IXQ6 854 aa7.29□□□□□ -1.24
CDKL5-208ENST00000624953 CLCN1P35523 988 aa7.28□□□□□ -1.24
CDKL5-208ENST00000624953 GPCPD1Q9NPB8 672 aa7.28□□□□□ -1.24
CDKL5-208ENST00000624953 HPS5Q9UPZ3 1129 aa7.28□□□□□ -1.24
CDKL5-208ENST00000624953 NECTIN2Q92692 538 aa7.27□□□□□ -1.25
CDKL5-208ENST00000624953 ACTN4O43707 911 aaKnown RBP7.26□□□□□ -1.25
CDKL5-208ENST00000624953 APLP1P51693 650 aa7.26□□□□□ -1.25
CDKL5-208ENST00000624953 MDM2Q00987 491 aaPredicted RBP7.26□□□□□ -1.25
CDKL5-208ENST00000624953 KCNC4Q03721 635 aa7.26□□□□□ -1.25
CDKL5-208ENST00000624953 PDE4DQ08499 809 aa7.26□□□□□ -1.25
CDKL5-208ENST00000624953 TPRNQ4KMQ1 711 aa7.25□□□□□ -1.25
CDKL5-208ENST00000624953 KRI1Q8N9T8 703 aaKnown RBP7.25□□□□□ -1.25
CDKL5-208ENST00000624953 GCGRP47871 477 aa7.24□□□□□ -1.25
CDKL5-208ENST00000624953 SULF1Q8IWU6 871 aa7.24□□□□□ -1.25
CDKL5-208ENST00000624953 LCE2BO14633 110 aa7.23□□□□□ -1.25
CDKL5-208ENST00000624953 PPP4CP60510 307 aa7.23□□□□□ -1.25
CDKL5-208ENST00000624953 TJAP1Q5JTD0 557 aa7.23□□□□□ -1.25
CDKL5-208ENST00000624953 GIGYF2Q6Y7W6 1299 aaKnown RBP7.23□□□□□ -1.25
CDKL5-208ENST00000624953 Q6ZNB5 142 aa7.23□□□□□ -1.25
CDKL5-208ENST00000624953 ABCC9O60706 1549 aa7.22□□□□□ -1.25
CDKL5-208ENST00000624953 MS4A1P11836 297 aa7.22□□□□□ -1.25
CDKL5-208ENST00000624953 HDGFP51858 240 aaKnown RBP7.22□□□□□ -1.25
CDKL5-208ENST00000624953 CFHP08603 1231 aa7.21□□□□□ -1.26
CDKL5-208ENST00000624953 PRR14Q9BWN1 585 aa7.21□□□□□ -1.26
CDKL5-208ENST00000624953 PRKCSHP14314 528 aaPredicted RBP7.2□□□□□ -1.26
CDKL5-208ENST00000624953 SSTR3P32745 418 aaPredicted RBP7.2□□□□□ -1.26
CDKL5-208ENST00000624953 DDX11L8A8MPP1 907 aa7.19□□□□□ -1.26
CDKL5-208ENST00000624953 SLC4A3P48751 1232 aa7.18□□□□□ -1.26
CDKL5-208ENST00000624953 KMT5BQ4FZB7 885 aa7.18□□□□□ -1.26
CDKL5-208ENST00000624953 MORN1Q5T089 497 aa7.18□□□□□ -1.26
CDKL5-208ENST00000624953 ZNF516Q92618 1163 aa7.18□□□□□ -1.26
CDKL5-208ENST00000624953 BRPF1P55201 1214 aaPredicted RBP7.17□□□□□ -1.26
CDKL5-208ENST00000624953 TTLL12Q14166 644 aaPredicted RBP7.17□□□□□ -1.26
CDKL5-208ENST00000624953 THAP11Q96EK4 314 aa7.17□□□□□ -1.26
CDKL5-208ENST00000624953 MTRQ99707 1265 aa7.17□□□□□ -1.26
CDKL5-208ENST00000624953 GJA5P36382 358 aa7.16□□□□□ -1.26
CDKL5-208ENST00000624953 USP46P62068 366 aa7.16□□□□□ -1.26
CDKL5-208ENST00000624953 FUT2Q10981 343 aa7.16□□□□□ -1.26
CDKL5-208ENST00000624953 RSPH4AQ5TD94 716 aa7.16□□□□□ -1.26
CDKL5-208ENST00000624953 KDM4CQ9H3R0 1056 aa7.16□□□□□ -1.26
CDKL5-208ENST00000624953 SALL2Q9Y467 1007 aaPredicted RBP7.16□□□□□ -1.26
CDKL5-208ENST00000624953 PLEKHG3A1L390 1219 aa7.15□□□□□ -1.26
CDKL5-208ENST00000624953 HOXA2O43364 376 aa7.15□□□□□ -1.26
CDKL5-208ENST00000624953 RNF40O75150 1001 aa7.15□□□□□ -1.26
CDKL5-208ENST00000624953 KDM4AO75164 1064 aa7.15□□□□□ -1.26
CDKL5-208ENST00000624953 BLOC1S3Q6QNY0 202 aa7.15□□□□□ -1.26
CDKL5-208ENST00000624953 RDH13Q8NBN7 331 aa7.15□□□□□ -1.26
CDKL5-208ENST00000624953 SPIRE2Q8WWL2 714 aa7.15□□□□□ -1.26
CDKL5-208ENST00000624953 IL21Q9HBE4 155 aa7.15□□□□□ -1.26
CDKL5-208ENST00000624953 GPBP1L1Q9HC44 474 aaPredicted RBP7.15□□□□□ -1.26
CDKL5-208ENST00000624953 GFRA3O60609 400 aa7.14□□□□□ -1.27
CDKL5-208ENST00000624953 ATP6V1AP38606 617 aa7.14□□□□□ -1.27
CDKL5-208ENST00000624953 TUSC1Q2TAM9 212 aa7.14□□□□□ -1.27
CDKL5-208ENST00000624953 PPP1R18Q6NYC8 613 aa7.14□□□□□ -1.27
CDKL5-208ENST00000624953 NKX2-3Q8TAU0 364 aa7.14□□□□□ -1.27
CDKL5-208ENST00000624953 PRKD2Q9BZL6 878 aa7.14□□□□□ -1.27
CDKL5-208ENST00000624953 CCDC180Q9P1Z9 1646 aa7.14□□□□□ -1.27
CDKL5-208ENST00000624953 BEGAINQ9BUH8 593 aa7.13□□□□□ -1.27
CDKL5-208ENST00000624953 PCDHB3Q9Y5E6 796 aa7.13□□□□□ -1.27
CDKL5-208ENST00000624953 ZPR1O75312 459 aa7.12□□□□□ -1.27
CDKL5-208ENST00000624953 SPTLC1O15269 473 aa7.11□□□□□ -1.27
CDKL5-208ENST00000624953 SCUBE3Q8IX30 993 aa7.11□□□□□ -1.27
CDKL5-208ENST00000624953 TBC1D2Q9BYX2 928 aa7.11□□□□□ -1.27
CDKL5-208ENST00000624953 FAM117AQ9C073 453 aa7.11□□□□□ -1.27
CDKL5-208ENST00000624953 SLC27A5Q9Y2P5 690 aa7.11□□□□□ -1.27
CDKL5-208ENST00000624953 PUS10Q3MIT2 529 aaKnown RBP7.1□□□□□ -1.27
CDKL5-208ENST00000624953 MYSM1Q5VVJ2 828 aa7.1□□□□□ -1.27
CDKL5-208ENST00000624953 BRICD5Q6PL45 260 aa7.1□□□□□ -1.27
CDKL5-208ENST00000624953 HLA-CQ95604 372 aa7.1□□□□□ -1.27
CDKL5-208ENST00000624953 PCDHGC3Q9UN70 934 aa7.1□□□□□ -1.27
CDKL5-208ENST00000624953 MOXD2PA6NHM9 499 aa7.09□□□□□ -1.27
CDKL5-208ENST00000624953 NR1I2O75469 434 aa7.09□□□□□ -1.27
CDKL5-208ENST00000624953 COPS2P61201 443 aa7.09□□□□□ -1.27
CDKL5-208ENST00000624953 RSBN1LQ6PCB5 846 aaPredicted RBP7.09□□□□□ -1.27
CDKL5-208ENST00000624953 TRAF7Q6Q0C0 670 aa7.09□□□□□ -1.27
CDKL5-208ENST00000624953 DDRGK1Q96HY6 314 aa7.09□□□□□ -1.27
CDKL5-208ENST00000624953 DIXDC1Q155Q3 683 aa7.08□□□□□ -1.28
CDKL5-208ENST00000624953 SH3D19Q5HYK7 790 aa7.08□□□□□ -1.28
CDKL5-208ENST00000624953 GOPCQ9HD26 462 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms