RNA–Protein interactions for RNA: ENST00000624304.3

SMIM11B-205, Transcript of small integral membrane protein 11B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM11B, Length 1,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11B-205ENST00000624304 PRAG1Q86YV5 1406 aa29.27■■■□□ 2.28
SMIM11B-205ENST00000624304 ADGRF5Q8IZF2 1346 aa29.25■■■□□ 2.27
SMIM11B-205ENST00000624304 A2ML1A8K2U0 1454 aa29.25■■■□□ 2.27
SMIM11B-205ENST00000624304 NEXMIFQ5QGS0 1516 aa29.24■■■□□ 2.27
SMIM11B-205ENST00000624304 PTPRMP28827 1452 aa29.24■■■□□ 2.27
SMIM11B-205ENST00000624304 UBR1Q8IWV7 1749 aa29.24■■■□□ 2.27
SMIM11B-205ENST00000624304 KDM4FA0A1W2PPD8 638 aa29.22■■■□□ 2.27
SMIM11B-205ENST00000624304 SENP3Q9H4L4 574 aaPredicted RBP29.22■■■□□ 2.27
SMIM11B-205ENST00000624304 SETD1BQ9UPS6 1966 aaKnown RBP29.22■■■□□ 2.27
SMIM11B-205ENST00000624304 TRPM1Q7Z4N2 1603 aa29.21■■■□□ 2.27
SMIM11B-205ENST00000624304 MYO3AQ8NEV4 1616 aa29.2■■■□□ 2.27
SMIM11B-205ENST00000624304 NBPF1Q3BBV0 1214 aa29.19■■■□□ 2.26
SMIM11B-205ENST00000624304 HIRIP3Q9BW71 556 aaPredicted RBP29.19■■■□□ 2.26
SMIM11B-205ENST00000624304 NLRP1Q9C000 1473 aa29.18■■■□□ 2.26
SMIM11B-205ENST00000624304 RPGRIP1LQ68CZ1 1315 aa29.18■■■□□ 2.26
SMIM11B-205ENST00000624304 MYOM2P54296 1465 aa29.17■■■□□ 2.26
SMIM11B-205ENST00000624304 RALGAPBQ86X10 1494 aa29.14■■■□□ 2.26
SMIM11B-205ENST00000624304 KDM5AP29375 1690 aaKnown RBP29.14■■■□□ 2.25
SMIM11B-205ENST00000624304 NRXN1Q9ULB1 1477 aa29.13■■■□□ 2.25
SMIM11B-205ENST00000624304 STAC3Q96MF2 364 aa29.12■■■□□ 2.25
SMIM11B-205ENST00000624304 RIMS2Q9UQ26 1411 aa29.11■■■□□ 2.25
SMIM11B-205ENST00000624304 CFAP70Q5T0N1 1121 aa29.11■■■□□ 2.25
SMIM11B-205ENST00000624304 VGFO15240 615 aaPredicted RBP29.1■■■□□ 2.25
SMIM11B-205ENST00000624304 ROCK2O75116 1388 aaKnown RBP29.09■■■□□ 2.25
SMIM11B-205ENST00000624304 CEP170BQ9Y4F5 1589 aaPredicted RBP29.09■■■□□ 2.25
SMIM11B-205ENST00000624304 ZFYVE9O95405 1425 aa29.09■■■□□ 2.25
SMIM11B-205ENST00000624304 PIK3C2GO75747 1445 aa29.08■■■□□ 2.25
SMIM11B-205ENST00000624304 CARD11Q9BXL7 1154 aa29.07■■■□□ 2.24
SMIM11B-205ENST00000624304 TMEM2Q9UHN6 1383 aa29.06■■■□□ 2.24
SMIM11B-205ENST00000624304 HSPA5P11021 654 aaKnown RBP29.05■■■□□ 2.24
SMIM11B-205ENST00000624304 KIAA1210Q9ULL0 1709 aa29.04■■■□□ 2.24
SMIM11B-205ENST00000624304 ZNF142P52746 1687 aaPredicted RBP29.04■■■□□ 2.24
SMIM11B-205ENST00000624304 LTKP29376 864 aa29.03■■■□□ 2.24
SMIM11B-205ENST00000624304 EIF4G2P78344 907 aaKnown RBP eCLIP29■■■□□ 2.23
SMIM11B-205ENST00000624304 THEMISQ8N1K5 641 aaPredicted RBP29■■■□□ 2.23
SMIM11B-205ENST00000624304 C14orf93Q9H972 538 aaKnown RBP29■■■□□ 2.23
SMIM11B-205ENST00000624304 GPRASP1Q5JY77 1395 aa29■■■□□ 2.23
SMIM11B-205ENST00000624304 TMEM132EQ6IEE7 984 aa28.99■■■□□ 2.23
SMIM11B-205ENST00000624304 USP47Q96K76 1375 aa28.98■■■□□ 2.23
SMIM11B-205ENST00000624304 TXNDC2Q86VQ3 553 aa28.97■■■□□ 2.23
SMIM11B-205ENST00000624304 ARHGAP23Q9P227 1491 aa28.97■■■□□ 2.23
SMIM11B-205ENST00000624304 SLIT1O75093 1534 aa28.97■■■□□ 2.23
SMIM11B-205ENST00000624304 SUPT16HQ9Y5B9 1047 aaKnown RBP28.96■■■□□ 2.23
SMIM11B-205ENST00000624304 NRXN3Q9Y4C0 1643 aa28.96■■■□□ 2.23
SMIM11B-205ENST00000624304 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.95■■■□□ 2.23
SMIM11B-205ENST00000624304 LAMC1P11047 1609 aa28.95■■■□□ 2.22
SMIM11B-205ENST00000624304 IQGAP1P46940 1657 aa28.94■■■□□ 2.22
SMIM11B-205ENST00000624304 ALKQ9UM73 1620 aa28.93■■■□□ 2.22
SMIM11B-205ENST00000624304 ADGRB1O14514 1584 aa28.92■■■□□ 2.22
SMIM11B-205ENST00000624304 SETD1AO15047 1707 aaKnown RBP28.92■■■□□ 2.22
SMIM11B-205ENST00000624304 HDGFP51858 240 aaKnown RBP28.91■■■□□ 2.22
SMIM11B-205ENST00000624304 ASXL1Q8IXJ9 1541 aa28.9■■■□□ 2.22
SMIM11B-205ENST00000624304 ST20-MTHFSA0A0A6YYL1 179 aa28.9■■■□□ 2.22
SMIM11B-205ENST00000624304 SETBP1Q9Y6X0 1596 aa28.89■■■□□ 2.22
SMIM11B-205ENST00000624304 EID1Q9Y6B2 187 aa28.89■■■□□ 2.22
SMIM11B-205ENST00000624304 BCANQ96GW7 911 aa28.89■■■□□ 2.21
SMIM11B-205ENST00000624304 C11orf95C9JLR9 678 aaPredicted RBP28.86■■■□□ 2.21
SMIM11B-205ENST00000624304 TRAK1Q9UPV9 953 aa28.85■■■□□ 2.21
SMIM11B-205ENST00000624304 SCAF11Q99590 1463 aaKnown RBP28.84■■■□□ 2.21
SMIM11B-205ENST00000624304 PLEKHG1Q9ULL1 1385 aa28.84■■■□□ 2.21
SMIM11B-205ENST00000624304 SLC26A8Q96RN1 970 aa28.83■■■□□ 2.2
SMIM11B-205ENST00000624304 ADAMTS13Q76LX8 1427 aa28.82■■■□□ 2.2
SMIM11B-205ENST00000624304 STK26Q9P289 416 aa28.81■■■□□ 2.2
SMIM11B-205ENST00000624304 METP08581 1390 aa28.81■■■□□ 2.2
SMIM11B-205ENST00000624304 HSPA2P54652 639 aa28.8■■■□□ 2.2
SMIM11B-205ENST00000624304 ANKLE2Q86XL3 938 aa28.8■■■□□ 2.2
SMIM11B-205ENST00000624304 NCKAP5LQ9HCH0 1330 aa28.78■■■□□ 2.2
SMIM11B-205ENST00000624304 POLR1AO95602 1720 aaPredicted RBP28.77■■■□□ 2.2
SMIM11B-205ENST00000624304 ARHGEF28Q8N1W1 1705 aaKnown RBP28.77■■■□□ 2.2
SMIM11B-205ENST00000624304 TESK2Q96S53 571 aa28.76■■■□□ 2.19
SMIM11B-205ENST00000624304 LMTK3Q96Q04 1460 aa28.76■■■□□ 2.19
SMIM11B-205ENST00000624304 YTHDC2Q9H6S0 1430 aaKnown RBP28.75■■■□□ 2.19
SMIM11B-205ENST00000624304 WASHC2AQ641Q2 1341 aa28.75■■■□□ 2.19
SMIM11B-205ENST00000624304 MED14O60244 1454 aa28.74■■■□□ 2.19
SMIM11B-205ENST00000624304 EIF3AQ14152 1382 aaKnown RBP28.68■■■□□ 2.18
SMIM11B-205ENST00000624304 SAFB2Q14151 953 aaKnown RBP eCLIP28.68■■■□□ 2.18
SMIM11B-205ENST00000624304 QRICH2Q9H0J4 1663 aa28.68■■■□□ 2.18
SMIM11B-205ENST00000624304 KIF7Q2M1P5 1343 aa28.68■■■□□ 2.18
SMIM11B-205ENST00000624304 TBX22Q9Y458 520 aa28.68■■■□□ 2.18
SMIM11B-205ENST00000624304 PTPRUQ92729 1446 aa28.67■■■□□ 2.18
SMIM11B-205ENST00000624304 DDX10Q13206 875 aaKnown RBP28.67■■■□□ 2.18
SMIM11B-205ENST00000624304 DISP3Q9P2K9 1392 aa28.66■■■□□ 2.18
SMIM11B-205ENST00000624304 CENPJQ9HC77 1338 aaPredicted RBP28.66■■■□□ 2.18
SMIM11B-205ENST00000624304 LRPPRCP42704 1394 aaKnown RBP28.66■■■□□ 2.18
SMIM11B-205ENST00000624304 POLR3GLQ9BT43 218 aa28.66■■■□□ 2.18
SMIM11B-205ENST00000624304 CCDC7Q96M83 1385 aa28.65■■■□□ 2.18
SMIM11B-205ENST00000624304 NPHP4O75161 1426 aaPredicted RBP28.65■■■□□ 2.18
SMIM11B-205ENST00000624304 WAPLQ7Z5K2 1190 aa28.64■■■□□ 2.18
SMIM11B-205ENST00000624304 PRAM1Q96QH2 718 aa28.63■■■□□ 2.17
SMIM11B-205ENST00000624304 STRCQ7RTU9 1775 aa28.63■■■□□ 2.17
SMIM11B-205ENST00000624304 ABCC11Q96J66 1382 aa28.62■■■□□ 2.17
SMIM11B-205ENST00000624304 PLEKHH1Q9ULM0 1364 aa28.62■■■□□ 2.17
SMIM11B-205ENST00000624304 DIP2AQ14689 1571 aa28.62■■■□□ 2.17
SMIM11B-205ENST00000624304 KNDC1Q76NI1 1749 aa28.61■■■□□ 2.17
SMIM11B-205ENST00000624304 CHD2O14647 1828 aaKnown RBP28.59■■■□□ 2.17
SMIM11B-205ENST00000624304 CCER2I3L3R5 266 aa28.59■■■□□ 2.17
SMIM11B-205ENST00000624304 AMOTL2Q9Y2J4 779 aa28.59■■■□□ 2.17
SMIM11B-205ENST00000624304 POGKQ9P215 609 aa28.58■■■□□ 2.17
SMIM11B-205ENST00000624304 DLC1Q96QB1 1528 aa28.57■■■□□ 2.16
SMIM11B-205ENST00000624304 TMF1P82094 1093 aa28.57■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms