RNA–Protein interactions for RNA: ENST00000623915.1

PCDHB5-202, Transcript of protocadherin beta 5, humanhuman

TSL 3

Gene PCDHB5, Length 869 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB5-202ENST00000623915 ZFYVE9O95405 1425 aa27.84■■■□□ 2.05
PCDHB5-202ENST00000623915 KCNA6P17658 529 aa27.84■■■□□ 2.05
PCDHB5-202ENST00000623915 SLC26A8Q96RN1 970 aa27.84■■■□□ 2.05
PCDHB5-202ENST00000623915 HFM1A2PYH4 1435 aa27.84■■■□□ 2.05
PCDHB5-202ENST00000623915 NKTRP30414 1462 aaKnown RBP27.82■■■□□ 2.04
PCDHB5-202ENST00000623915 TMEM131LA2VDJ0 1609 aa27.81■■■□□ 2.04
PCDHB5-202ENST00000623915 NAIPQ13075 1403 aa27.81■■■□□ 2.04
PCDHB5-202ENST00000623915 FAM135BQ49AJ0 1406 aa27.8■■■□□ 2.04
PCDHB5-202ENST00000623915 E9PCH4 1651 aa27.78■■■□□ 2.04
PCDHB5-202ENST00000623915 IQGAP3Q86VI3 1631 aa27.78■■■□□ 2.04
PCDHB5-202ENST00000623915 PHF23Q9BUL5 403 aaPredicted RBP27.77■■■□□ 2.04
PCDHB5-202ENST00000623915 PLEKHG1Q9ULL1 1385 aa27.76■■■□□ 2.03
PCDHB5-202ENST00000623915 RIMS2Q9UQ26 1411 aa27.75■■■□□ 2.03
PCDHB5-202ENST00000623915 ROBO1Q9Y6N7 1651 aa27.75■■■□□ 2.03
PCDHB5-202ENST00000623915 ITGAEP38570 1179 aa27.75■■■□□ 2.03
PCDHB5-202ENST00000623915 RBM33Q96EV2 1170 aaKnown RBP27.75■■■□□ 2.03
PCDHB5-202ENST00000623915 PROSER2Q86WR7 435 aaPredicted RBP27.74■■■□□ 2.03
PCDHB5-202ENST00000623915 CHD2O14647 1828 aaKnown RBP27.73■■■□□ 2.03
PCDHB5-202ENST00000623915 RGS17Q9UGC6 210 aaPredicted RBP27.67■■■□□ 2.02
PCDHB5-202ENST00000623915 ACIN1Q9UKV3 1341 aaKnown RBP27.67■■■□□ 2.02
PCDHB5-202ENST00000623915 BCANQ96GW7 911 aa27.66■■■□□ 2.02
PCDHB5-202ENST00000623915 ADAMTS13Q76LX8 1427 aa27.66■■■□□ 2.02
PCDHB5-202ENST00000623915 MSH6P52701 1360 aa27.64■■■□□ 2.02
PCDHB5-202ENST00000623915 PPP1R15AO75807 674 aaPredicted RBP27.64■■■□□ 2.02
PCDHB5-202ENST00000623915 DIP2AQ14689 1571 aa27.62■■■□□ 2.01
PCDHB5-202ENST00000623915 TBX22Q9Y458 520 aa27.62■■■□□ 2.01
PCDHB5-202ENST00000623915 HDGFP51858 240 aaKnown RBP27.61■■■□□ 2.01
PCDHB5-202ENST00000623915 NUP155O75694 1391 aa27.6■■■□□ 2.01
PCDHB5-202ENST00000623915 CHGAP10645 457 aaKnown RBP27.59■■■□□ 2.01
PCDHB5-202ENST00000623915 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.59■■■□□ 2.01
PCDHB5-202ENST00000623915 NUTM2DQ5VT03 806 aaPredicted RBP27.58■■■□□ 2.01
PCDHB5-202ENST00000623915 SLAIN2Q9P270 581 aa27.57■■■□□ 2
PCDHB5-202ENST00000623915 NCOA3Q9Y6Q9 1424 aa27.57■■■□□ 2
PCDHB5-202ENST00000623915 PHLPP1O60346 1717 aa27.56■■■□□ 2
PCDHB5-202ENST00000623915 PIK3R4Q99570 1358 aa27.54■■■□□ 2
PCDHB5-202ENST00000623915 SPHKAPQ2M3C7 1700 aa27.53■■■□□ 2
PCDHB5-202ENST00000623915 COL16A1Q07092 1604 aaPredicted RBP27.53■■■□□ 2
PCDHB5-202ENST00000623915 NRXN3Q9Y4C0 1643 aa27.52■■■□□ 2
PCDHB5-202ENST00000623915 SETD5Q9C0A6 1442 aa27.52■■■□□ 2
PCDHB5-202ENST00000623915 TRPM2O94759 1503 aa27.51■■■□□ 2
PCDHB5-202ENST00000623915 PTPRUQ92729 1446 aa27.51■■□□□ 1.99
PCDHB5-202ENST00000623915 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.51■■□□□ 1.99
PCDHB5-202ENST00000623915 HRCP23327 699 aa27.49■■□□□ 1.99
PCDHB5-202ENST00000623915 POTEAQ6S8J7 498 aa27.48■■□□□ 1.99
PCDHB5-202ENST00000623915 SETBP1Q9Y6X0 1596 aa27.48■■□□□ 1.99
PCDHB5-202ENST00000623915 XRN1Q8IZH2 1706 aaKnown RBP27.47■■□□□ 1.99
PCDHB5-202ENST00000623915 JCADQ9P266 1359 aa27.47■■□□□ 1.99
PCDHB5-202ENST00000623915 AHDC1Q5TGY3 1603 aaPredicted RBP27.45■■□□□ 1.98
PCDHB5-202ENST00000623915 CLTCL1P53675 1640 aa27.42■■□□□ 1.98
PCDHB5-202ENST00000623915 C19orf44Q9H6X5 657 aa27.42■■□□□ 1.98
PCDHB5-202ENST00000623915 AMOTL2Q9Y2J4 779 aa27.42■■□□□ 1.98
PCDHB5-202ENST00000623915 C14orf37Q86TY3 774 aa27.41■■□□□ 1.98
PCDHB5-202ENST00000623915 CADPS2Q86UW7 1296 aa27.4■■□□□ 1.98
PCDHB5-202ENST00000623915 LRP6O75581 1613 aa27.4■■□□□ 1.98
PCDHB5-202ENST00000623915 NEXMIFQ5QGS0 1516 aa27.39■■□□□ 1.98
PCDHB5-202ENST00000623915 RAB3GAP2Q9H2M9 1393 aa27.38■■□□□ 1.97
PCDHB5-202ENST00000623915 DCCP43146 1447 aa27.37■■□□□ 1.97
PCDHB5-202ENST00000623915 ATF3P18847 181 aa27.36■■□□□ 1.97
PCDHB5-202ENST00000623915 SHPRHQ149N8 1683 aa27.36■■□□□ 1.97
PCDHB5-202ENST00000623915 METP08581 1390 aa27.35■■□□□ 1.97
PCDHB5-202ENST00000623915 TRIM52Q96A61 297 aa27.33■■□□□ 1.97
PCDHB5-202ENST00000623915 ZNF326Q5BKZ1 582 aaKnown RBP27.32■■□□□ 1.96
PCDHB5-202ENST00000623915 BRINP3Q76B58 766 aa27.32■■□□□ 1.96
PCDHB5-202ENST00000623915 SLC4A1APQ9BWU0 796 aaKnown RBP27.32■■□□□ 1.96
PCDHB5-202ENST00000623915 SPATA31A6Q5VVP1 1343 aa27.32■■□□□ 1.96
PCDHB5-202ENST00000623915 SETD1AO15047 1707 aaKnown RBP27.31■■□□□ 1.96
PCDHB5-202ENST00000623915 MST1RQ04912 1400 aa27.31■■□□□ 1.96
PCDHB5-202ENST00000623915 ASXL1Q8IXJ9 1541 aa27.31■■□□□ 1.96
PCDHB5-202ENST00000623915 KIF1BO60333 1816 aa27.29■■□□□ 1.96
PCDHB5-202ENST00000623915 MPHOSPH9Q99550 1183 aa27.28■■□□□ 1.96
PCDHB5-202ENST00000623915 NALCNQ8IZF0 1738 aa27.27■■□□□ 1.96
PCDHB5-202ENST00000623915 NHSL1Q5SYE7 1610 aa27.27■■□□□ 1.96
PCDHB5-202ENST00000623915 ADGRL3Q9HAR2 1447 aa27.26■■□□□ 1.95
PCDHB5-202ENST00000623915 PTCH1Q13635 1447 aa27.19■■□□□ 1.94
PCDHB5-202ENST00000623915 TRIM26Q12899 539 aaPredicted RBP27.18■■□□□ 1.94
PCDHB5-202ENST00000623915 PRAG1Q86YV5 1406 aa27.17■■□□□ 1.94
PCDHB5-202ENST00000623915 MEX3CQ5U5Q3 659 aaKnown RBP27.17■■□□□ 1.94
PCDHB5-202ENST00000623915 PPLO60437 1756 aa27.15■■□□□ 1.94
PCDHB5-202ENST00000623915 ROBO2Q9HCK4 1378 aa27.14■■□□□ 1.94
PCDHB5-202ENST00000623915 ZNF772Q68DY9 489 aaPredicted RBP27.14■■□□□ 1.94
PCDHB5-202ENST00000623915 LAMC1P11047 1609 aa27.12■■□□□ 1.93
PCDHB5-202ENST00000623915 DDX17Q92841 729 aaKnown RBP27.12■■□□□ 1.93
PCDHB5-202ENST00000623915 CCDC144AA2RUR9 1427 aa27.12■■□□□ 1.93
PCDHB5-202ENST00000623915 C1orf167Q5SNV9 1468 aa27.12■■□□□ 1.93
PCDHB5-202ENST00000623915 VGFO15240 615 aaPredicted RBP27.11■■□□□ 1.93
PCDHB5-202ENST00000623915 NUTM2BA6NNL0 878 aaPredicted RBP27.1■■□□□ 1.93
PCDHB5-202ENST00000623915 NUTM2EB1AL46 878 aaPredicted RBP27.1■■□□□ 1.93
PCDHB5-202ENST00000623915 NUTM2AQ8IVF1 878 aaPredicted RBP27.1■■□□□ 1.93
PCDHB5-202ENST00000623915 PNPLA6Q8IY17 1366 aa27.09■■□□□ 1.93
PCDHB5-202ENST00000623915 RPGRIP1LQ68CZ1 1315 aa27.09■■□□□ 1.93
PCDHB5-202ENST00000623915 ANKRD30BQ9BXX2 1392 aa27.09■■□□□ 1.93
PCDHB5-202ENST00000623915 SPATA31E1Q6ZUB1 1445 aa27.08■■□□□ 1.93
PCDHB5-202ENST00000623915 LRRC59Q96AG4 307 aaKnown RBP27.07■■□□□ 1.92
PCDHB5-202ENST00000623915 FOXD1Q16676 465 aa27.06■■□□□ 1.92
PCDHB5-202ENST00000623915 AFF2P51816 1311 aa27.05■■□□□ 1.92
PCDHB5-202ENST00000623915 CDK12Q9NYV4 1490 aaPredicted RBP27.04■■□□□ 1.92
PCDHB5-202ENST00000623915 IFT172Q9UG01 1749 aa27.04■■□□□ 1.92
PCDHB5-202ENST00000623915 RXRBP28702 533 aa27.01■■□□□ 1.91
PCDHB5-202ENST00000623915 ORAI2Q96SN7 254 aa27■■□□□ 1.91
PCDHB5-202ENST00000623915 SOS2Q07890 1332 aaPredicted RBP26.99■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms