RNA–Protein interactions for RNA: ENST00000622454.4

EPB42-210, Transcript of erythrocyte membrane protein band 4.2, humanhuman

TSL 1 (best) BASIC

Gene EPB42, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB42-210ENST00000622454 ABCC3O15438 1527 aa19.04■□□□□ 0.64
EPB42-210ENST00000622454 FKBP8Q14318 412 aa19.04■□□□□ 0.64
EPB42-210ENST00000622454 ZBED9Q6R2W3 1325 aa19.03■□□□□ 0.64
EPB42-210ENST00000622454 CAMSAP1Q5T5Y3 1602 aa19.03■□□□□ 0.64
EPB42-210ENST00000622454 ADGRB3O60242 1522 aa19.02■□□□□ 0.64
EPB42-210ENST00000622454 MYBBP1AQ9BQG0 1328 aaKnown RBP19.02■□□□□ 0.64
EPB42-210ENST00000622454 PER1O15534 1290 aaPredicted RBP19.01■□□□□ 0.63
EPB42-210ENST00000622454 PELP1Q8IZL8 1130 aaKnown RBP19.01■□□□□ 0.63
EPB42-210ENST00000622454 TMC1Q8TDI8 760 aa19.01■□□□□ 0.63
EPB42-210ENST00000622454 EIF3AQ14152 1382 aaKnown RBP19.01■□□□□ 0.63
EPB42-210ENST00000622454 BRD4O60885 1362 aaPredicted RBP19■□□□□ 0.63
EPB42-210ENST00000622454 ZC3H13Q5T200 1668 aaKnown RBP19■□□□□ 0.63
EPB42-210ENST00000622454 NRXN1Q9ULB1 1477 aa18.99■□□□□ 0.63
EPB42-210ENST00000622454 PARD3Q8TEW0 1356 aa18.99■□□□□ 0.63
EPB42-210ENST00000622454 PPLO60437 1756 aa18.98■□□□□ 0.63
EPB42-210ENST00000622454 ADGRF5Q8IZF2 1346 aa18.98■□□□□ 0.63
EPB42-210ENST00000622454 PNISRQ8TF01 805 aaKnown RBP18.98■□□□□ 0.63
EPB42-210ENST00000622454 CDCA8Q53HL2 280 aa18.97■□□□□ 0.63
EPB42-210ENST00000622454 SIGLEC1Q9BZZ2 1709 aa18.97■□□□□ 0.63
EPB42-210ENST00000622454 PANK3Q9H999 370 aa18.96■□□□□ 0.63
EPB42-210ENST00000622454 CFAP70Q5T0N1 1121 aa18.96■□□□□ 0.63
EPB42-210ENST00000622454 NOS1P29475 1434 aa18.95■□□□□ 0.62
EPB42-210ENST00000622454 CHGAP10645 457 aaKnown RBP18.94■□□□□ 0.62
EPB42-210ENST00000622454 PIK3C2BO00750 1634 aa18.94■□□□□ 0.62
EPB42-210ENST00000622454 ARHGAP31Q2M1Z3 1444 aa18.93■□□□□ 0.62
EPB42-210ENST00000622454 SLC24A1O60721 1099 aa18.93■□□□□ 0.62
EPB42-210ENST00000622454 NLRP13Q86W25 1043 aa18.93■□□□□ 0.62
EPB42-210ENST00000622454 SYNMO15061 1565 aa18.93■□□□□ 0.62
EPB42-210ENST00000622454 SETBP1Q9Y6X0 1596 aa18.93■□□□□ 0.62
EPB42-210ENST00000622454 LRPPRCP42704 1394 aaKnown RBP18.92■□□□□ 0.62
EPB42-210ENST00000622454 RPGRIP1LQ68CZ1 1315 aa18.92■□□□□ 0.62
EPB42-210ENST00000622454 REREQ9P2R6 1566 aa18.92■□□□□ 0.62
EPB42-210ENST00000622454 KDM5AP29375 1690 aaKnown RBP18.91■□□□□ 0.62
EPB42-210ENST00000622454 BCANQ96GW7 911 aa18.91■□□□□ 0.62
EPB42-210ENST00000622454 MYO3AQ8NEV4 1616 aa18.9■□□□□ 0.62
EPB42-210ENST00000622454 PIK3C2GO75747 1445 aa18.89■□□□□ 0.62
EPB42-210ENST00000622454 MYOM1P52179 1685 aa18.89■□□□□ 0.61
EPB42-210ENST00000622454 ARHGEF40Q8TER5 1519 aa18.89■□□□□ 0.61
EPB42-210ENST00000622454 CC2D1BQ5T0F9 858 aaKnown RBP18.88■□□□□ 0.61
EPB42-210ENST00000622454 AGLP35573 1532 aa18.88■□□□□ 0.61
EPB42-210ENST00000622454 C14orf93Q9H972 538 aaKnown RBP18.85■□□□□ 0.61
EPB42-210ENST00000622454 KNSTRNQ9Y448 316 aa18.85■□□□□ 0.61
EPB42-210ENST00000622454 PREX1Q8TCU6 1659 aa18.85■□□□□ 0.61
EPB42-210ENST00000622454 SBNO2Q9Y2G9 1366 aa18.85■□□□□ 0.61
EPB42-210ENST00000622454 ERVK-7P63135 1459 aa18.84■□□□□ 0.61
EPB42-210ENST00000622454 MLECQ14165 292 aa18.84■□□□□ 0.61
EPB42-210ENST00000622454 SMG6Q86US8 1419 aaKnown RBP18.84■□□□□ 0.61
EPB42-210ENST00000622454 NEXMIFQ5QGS0 1516 aa18.83■□□□□ 0.61
EPB42-210ENST00000622454 SLC52A1Q9NWF4 448 aa18.83■□□□□ 0.6
EPB42-210ENST00000622454 ADGRB1O14514 1584 aa18.83■□□□□ 0.6
EPB42-210ENST00000622454 VGFO15240 615 aaPredicted RBP18.82■□□□□ 0.6
EPB42-210ENST00000622454 PPP6R1Q9UPN7 881 aa18.81■□□□□ 0.6
EPB42-210ENST00000622454 ASXL1Q8IXJ9 1541 aa18.81■□□□□ 0.6
EPB42-210ENST00000622454 CLTCQ00610 1675 aaKnown RBP18.81■□□□□ 0.6
EPB42-210ENST00000622454 IDI1Q13907 227 aa18.81■□□□□ 0.6
EPB42-210ENST00000622454 MYO5BQ9ULV0 1848 aa18.8■□□□□ 0.6
EPB42-210ENST00000622454 CENPJQ9HC77 1338 aaPredicted RBP18.8■□□□□ 0.6
EPB42-210ENST00000622454 TRHP20396 242 aaPredicted RBP18.8■□□□□ 0.6
EPB42-210ENST00000622454 ERICH6BQ5W0A0 696 aa18.8■□□□□ 0.6
EPB42-210ENST00000622454 QRICH2Q9H0J4 1663 aa18.8■□□□□ 0.6
EPB42-210ENST00000622454 AMER1Q5JTC6 1135 aaPredicted RBP18.8■□□□□ 0.6
EPB42-210ENST00000622454 FBXO31Q5XUX0 539 aaPredicted RBP18.79■□□□□ 0.6
EPB42-210ENST00000622454 NUDCQ9Y266 331 aa18.78■□□□□ 0.6
EPB42-210ENST00000622454 NPC1L1Q9UHC9 1359 aa18.78■□□□□ 0.6
EPB42-210ENST00000622454 INSRP06213 1382 aa18.78■□□□□ 0.6
EPB42-210ENST00000622454 TMEM131LA2VDJ0 1609 aa18.78■□□□□ 0.6
EPB42-210ENST00000622454 TRAK1Q9UPV9 953 aa18.77■□□□□ 0.6
EPB42-210ENST00000622454 ZFYVE9O95405 1425 aa18.77■□□□□ 0.6
EPB42-210ENST00000622454 IRX6P78412 446 aaPredicted RBP18.76■□□□□ 0.59
EPB42-210ENST00000622454 TMEM132EQ6IEE7 984 aa18.75■□□□□ 0.59
EPB42-210ENST00000622454 ESF1Q9H501 851 aaKnown RBP18.74■□□□□ 0.59
EPB42-210ENST00000622454 NUTM2DQ5VT03 806 aaPredicted RBP18.74■□□□□ 0.59
EPB42-210ENST00000622454 ARHGEF28Q8N1W1 1705 aaKnown RBP18.74■□□□□ 0.59
EPB42-210ENST00000622454 PPP2R1AP30153 589 aa18.73■□□□□ 0.59
EPB42-210ENST00000622454 SENP3-EIF4A1A0A087X0R7 540 aa18.72■□□□□ 0.59
EPB42-210ENST00000622454 BLMP54132 1417 aaPredicted RBP18.72■□□□□ 0.59
EPB42-210ENST00000622454 STAG3Q9UJ98 1225 aa18.69■□□□□ 0.58
EPB42-210ENST00000622454 PDE3BQ13370 1112 aa18.68■□□□□ 0.58
EPB42-210ENST00000622454 PPP4R2Q9NY27 417 aa18.68■□□□□ 0.58
EPB42-210ENST00000622454 SPATA31D1Q6ZQQ2 1576 aa18.68■□□□□ 0.58
EPB42-210ENST00000622454 CARD14Q9BXL6 1004 aa18.68■□□□□ 0.58
EPB42-210ENST00000622454 ZMYM3Q14202 1370 aa18.67■□□□□ 0.58
EPB42-210ENST00000622454 RNF123Q5XPI4 1314 aa18.67■□□□□ 0.58
EPB42-210ENST00000622454 PUS7Q96PZ0 661 aaKnown RBP18.66■□□□□ 0.58
EPB42-210ENST00000622454 TSHZ2Q9NRE2 1034 aa18.66■□□□□ 0.58
EPB42-210ENST00000622454 SENP3Q9H4L4 574 aaPredicted RBP18.65■□□□□ 0.58
EPB42-210ENST00000622454 EVC2Q86UK5 1308 aa18.64■□□□□ 0.58
EPB42-210ENST00000622454 WDR43Q15061 677 aaKnown RBP eCLIP18.64■□□□□ 0.57
EPB42-210ENST00000622454 ADAMTS8Q9UP79 889 aa18.64■□□□□ 0.57
EPB42-210ENST00000622454 SALL2Q9Y467 1007 aaPredicted RBP18.64■□□□□ 0.57
EPB42-210ENST00000622454 TULP4Q9NRJ4 1543 aa18.63■□□□□ 0.57
EPB42-210ENST00000622454 SLC12A5Q9H2X9 1139 aa18.62■□□□□ 0.57
EPB42-210ENST00000622454 USP32Q8NFA0 1604 aa18.61■□□□□ 0.57
EPB42-210ENST00000622454 NSD3Q9BZ95 1437 aa18.61■□□□□ 0.57
EPB42-210ENST00000622454 DNAJC5Q9H3Z4 198 aa18.61■□□□□ 0.57
EPB42-210ENST00000622454 ALKQ9UM73 1620 aa18.6■□□□□ 0.57
EPB42-210ENST00000622454 A2ML1A8K2U0 1454 aa18.59■□□□□ 0.57
EPB42-210ENST00000622454 PTPRMP28827 1452 aa18.58■□□□□ 0.57
EPB42-210ENST00000622454 STK26Q9P289 416 aa18.58■□□□□ 0.57
EPB42-210ENST00000622454 YTHDC2Q9H6S0 1430 aaKnown RBP18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms