RNA–Protein interactions for RNA: ENST00000622045.4

SYNRG-231, Transcript of synergin gamma, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNRG-231	ENST00000622045		E9PCH4	1651 aa		18.48	■□□□□ 0.55
SYNRG-231	ENST00000622045	PLA2R1	Q13018	1463 aa		18.48	■□□□□ 0.55
SYNRG-231	ENST00000622045	SLFN5	Q08AF3	891 aa		18.48	■□□□□ 0.55
SYNRG-231	ENST00000622045	GLIPR1L2	Q4G1C9	344 aa		18.48	■□□□□ 0.55
SYNRG-231	ENST00000622045	BCAR3	O75815	825 aa		18.47	■□□□□ 0.55
SYNRG-231	ENST00000622045	IGHD	P01880	384 aa		18.47	■□□□□ 0.55
SYNRG-231	ENST00000622045	L1TD1	Q5T7N2	865 aa	Known RBP	18.47	■□□□□ 0.55
SYNRG-231	ENST00000622045	PNN	Q9H307	717 aa	Known RBP	18.47	■□□□□ 0.55
SYNRG-231	ENST00000622045	ZMYM4	Q5VZL5	1548 aa		18.47	■□□□□ 0.55
SYNRG-231	ENST00000622045	BECN1	Q14457	450 aa		18.47	■□□□□ 0.55
SYNRG-231	ENST00000622045	PANK2	Q9BZ23	570 aa		18.47	■□□□□ 0.55
SYNRG-231	ENST00000622045	AMER1	Q5JTC6	1135 aa	Predicted RBP	18.47	■□□□□ 0.55
SYNRG-231	ENST00000622045	USP19	O94966	1318 aa		18.46	■□□□□ 0.55
SYNRG-231	ENST00000622045	TRPM1	Q7Z4N2	1603 aa		18.46	■□□□□ 0.55
SYNRG-231	ENST00000622045	XRCC6	P12956	609 aa	Known RBP eCLIP	18.44	■□□□□ 0.54
SYNRG-231	ENST00000622045	NEUROD2	Q15784	382 aa		18.44	■□□□□ 0.54
SYNRG-231	ENST00000622045	ZMYND15	Q9H091	742 aa		18.44	■□□□□ 0.54
SYNRG-231	ENST00000622045	NUP160	Q12769	1436 aa		18.43	■□□□□ 0.54
SYNRG-231	ENST00000622045	ARHGAP5	Q13017	1502 aa		18.43	■□□□□ 0.54
SYNRG-231	ENST00000622045	SPINK5	Q9NQ38	1064 aa	Predicted RBP	18.43	■□□□□ 0.54
SYNRG-231	ENST00000622045	ABCA8	O94911	1581 aa		18.42	■□□□□ 0.54
SYNRG-231	ENST00000622045	ARHGEF5	Q12774	1597 aa		18.42	■□□□□ 0.54
SYNRG-231	ENST00000622045	GOLGA6L3	A6NEY3	463 aa		18.42	■□□□□ 0.54
SYNRG-231	ENST00000622045	HSP90AA2P	Q14568	343 aa	Predicted RBP	18.42	■□□□□ 0.54
SYNRG-231	ENST00000622045		E9PSI1	815 aa		18.41	■□□□□ 0.54
SYNRG-231	ENST00000622045	MAGI2	Q86UL8	1455 aa		18.4	■□□□□ 0.54
SYNRG-231	ENST00000622045	HSP90AA1	P07900	732 aa	Known RBP	18.4	■□□□□ 0.54
SYNRG-231	ENST00000622045	PRDM15	P57071	1507 aa	Predicted RBP	18.4	■□□□□ 0.54
SYNRG-231	ENST00000622045	SYCP2	Q9BX26	1530 aa		18.4	■□□□□ 0.54
SYNRG-231	ENST00000622045	COG6	Q9Y2V7	657 aa		18.4	■□□□□ 0.54
SYNRG-231	ENST00000622045	ZNF521	Q96K83	1311 aa		18.4	■□□□□ 0.54
SYNRG-231	ENST00000622045	PANK1	Q8TE04	598 aa		18.38	■□□□□ 0.53
SYNRG-231	ENST00000622045	TNNT2	P45379	298 aa	Predicted RBP	18.38	■□□□□ 0.53
SYNRG-231	ENST00000622045	SAMD9L	Q8IVG5	1584 aa		18.38	■□□□□ 0.53
SYNRG-231	ENST00000622045	CENPJ	Q9HC77	1338 aa	Predicted RBP	18.36	■□□□□ 0.53
SYNRG-231	ENST00000622045	EFCAB2	Q5VUJ9	269 aa		18.36	■□□□□ 0.53
SYNRG-231	ENST00000622045	WDR7	Q9Y4E6	1490 aa		18.35	■□□□□ 0.53
SYNRG-231	ENST00000622045	TBC1D2	Q9BYX2	928 aa		18.35	■□□□□ 0.53
SYNRG-231	ENST00000622045	CGNL1	Q0VF96	1302 aa		18.35	■□□□□ 0.53
SYNRG-231	ENST00000622045	UPF2	Q9HAU5	1272 aa	Known RBP	18.34	■□□□□ 0.53
SYNRG-231	ENST00000622045	CLUAP1	Q96AJ1	413 aa		18.34	■□□□□ 0.53
SYNRG-231	ENST00000622045	EIF2AK4	Q9P2K8	1649 aa	Known RBP	18.33	■□□□□ 0.53
SYNRG-231	ENST00000622045	ANTXR1	Q9H6X2	564 aa		18.33	■□□□□ 0.53
SYNRG-231	ENST00000622045	NKTR	P30414	1462 aa	Known RBP	18.33	■□□□□ 0.53
SYNRG-231	ENST00000622045	EIF3A	Q14152	1382 aa	Known RBP	18.33	■□□□□ 0.52
SYNRG-231	ENST00000622045	RRP7A	Q9Y3A4	280 aa	Known RBP	18.33	■□□□□ 0.52
SYNRG-231	ENST00000622045	DMRT2	Q9Y5R5	561 aa		18.33	■□□□□ 0.52
SYNRG-231	ENST00000622045	TRMT2A	Q8IZ69	625 aa	Known RBP	18.32	■□□□□ 0.52
SYNRG-231	ENST00000622045	PDE3A	Q14432	1141 aa		18.31	■□□□□ 0.52
SYNRG-231	ENST00000622045	CFAP70	Q5T0N1	1121 aa		18.31	■□□□□ 0.52
SYNRG-231	ENST00000622045	SPAG9	O60271	1321 aa	Known RBP	18.31	■□□□□ 0.52
SYNRG-231	ENST00000622045	MCM4	P33991	863 aa		18.3	■□□□□ 0.52
SYNRG-231	ENST00000622045	MAPK8IP3	Q9UPT6	1336 aa		18.3	■□□□□ 0.52
SYNRG-231	ENST00000622045	CLCN1	P35523	988 aa		18.3	■□□□□ 0.52
SYNRG-231	ENST00000622045	ASXL1	Q8IXJ9	1541 aa		18.3	■□□□□ 0.52
SYNRG-231	ENST00000622045	AFAP1	Q8N556	730 aa		18.3	■□□□□ 0.52
SYNRG-231	ENST00000622045	BCL2L13	Q9BXK5	485 aa		18.29	■□□□□ 0.52
SYNRG-231	ENST00000622045	PIK3C2G	O75747	1445 aa		18.29	■□□□□ 0.52
SYNRG-231	ENST00000622045	CHGA	P10645	457 aa	Known RBP	18.29	■□□□□ 0.52
SYNRG-231	ENST00000622045	SCAF11	Q99590	1463 aa	Known RBP	18.29	■□□□□ 0.52
SYNRG-231	ENST00000622045	MORC1	Q86VD1	984 aa		18.28	■□□□□ 0.52
SYNRG-231	ENST00000622045	WWC1	Q8IX03	1113 aa		18.28	■□□□□ 0.52
SYNRG-231	ENST00000622045	TRAK2	O60296	914 aa		18.28	■□□□□ 0.52
SYNRG-231	ENST00000622045	STAC3	Q96MF2	364 aa		18.28	■□□□□ 0.52
SYNRG-231	ENST00000622045	CDC42BPB	Q9Y5S2	1711 aa		18.27	■□□□□ 0.52
SYNRG-231	ENST00000622045	SLC24A1	O60721	1099 aa		18.27	■□□□□ 0.52
SYNRG-231	ENST00000622045	NGEF	Q8N5V2	710 aa		18.26	■□□□□ 0.51
SYNRG-231	ENST00000622045	DUOX2	Q9NRD8	1548 aa		18.26	■□□□□ 0.51
SYNRG-231	ENST00000622045	FSD2	A1L4K1	749 aa		18.26	■□□□□ 0.51
SYNRG-231	ENST00000622045	TNN	Q9UQP3	1299 aa		18.26	■□□□□ 0.51
SYNRG-231	ENST00000622045	PREX2	Q70Z35	1606 aa		18.26	■□□□□ 0.51
SYNRG-231	ENST00000622045	LAMC1	P11047	1609 aa		18.25	■□□□□ 0.51
SYNRG-231	ENST00000622045	CARD14	Q9BXL6	1004 aa		18.25	■□□□□ 0.51
SYNRG-231	ENST00000622045	KIF3B	O15066	747 aa		18.25	■□□□□ 0.51
SYNRG-231	ENST00000622045	RRP9	O43818	475 aa	Known RBP	18.25	■□□□□ 0.51
SYNRG-231	ENST00000622045	PMFBP1	Q8TBY8	1022 aa		18.25	■□□□□ 0.51
SYNRG-231	ENST00000622045	TBC1D32	Q96NH3	1257 aa		18.25	■□□□□ 0.51
SYNRG-231	ENST00000622045	MYH16	Q9H6N6	1097 aa		18.25	■□□□□ 0.51
SYNRG-231	ENST00000622045	UNC13B	O14795	1591 aa		18.24	■□□□□ 0.51
SYNRG-231	ENST00000622045	ATP10A	O60312	1499 aa		18.24	■□□□□ 0.51
SYNRG-231	ENST00000622045	MFAP1	P55081	439 aa	Known RBP	18.24	■□□□□ 0.51
SYNRG-231	ENST00000622045	PDZRN3	Q9UPQ7	1066 aa		18.24	■□□□□ 0.51
SYNRG-231	ENST00000622045	ERBB4	Q15303	1308 aa		18.22	■□□□□ 0.51
SYNRG-231	ENST00000622045	TCP11L2	Q8N4U5	519 aa		18.22	■□□□□ 0.51
SYNRG-231	ENST00000622045	PCDHB15	Q9Y5E8	787 aa		18.22	■□□□□ 0.51
SYNRG-231	ENST00000622045	NPC1L1	Q9UHC9	1359 aa		18.22	■□□□□ 0.51
SYNRG-231	ENST00000622045	IQGAP3	Q86VI3	1631 aa		18.22	■□□□□ 0.51
SYNRG-231	ENST00000622045	ESPN	B1AK53	854 aa		18.22	■□□□□ 0.51
SYNRG-231	ENST00000622045	KANK1	Q14678	1352 aa		18.21	■□□□□ 0.51
SYNRG-231	ENST00000622045	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	18.21	■□□□□ 0.51
SYNRG-231	ENST00000622045	GRPEL1	Q9HAV7	217 aa		18.21	■□□□□ 0.51
SYNRG-231	ENST00000622045	MYO5C	Q9NQX4	1742 aa		18.21	■□□□□ 0.51
SYNRG-231	ENST00000622045	TTC37	Q6PGP7	1564 aa		18.21	■□□□□ 0.5
SYNRG-231	ENST00000622045	MRE11	P49959	708 aa		18.21	■□□□□ 0.5
SYNRG-231	ENST00000622045	TRIM44	Q96DX7	344 aa	Predicted RBP	18.21	■□□□□ 0.5
SYNRG-231	ENST00000622045	RARS	P54136	660 aa	Known RBP	18.2	■□□□□ 0.5
SYNRG-231	ENST00000622045	RWDD1	Q9H446	243 aa	Predicted RBP	18.2	■□□□□ 0.5
SYNRG-231	ENST00000622045	RUNDC1	Q96C34	613 aa		18.2	■□□□□ 0.5
SYNRG-231	ENST00000622045	TRAK1	Q9UPV9	953 aa		18.2	■□□□□ 0.5
SYNRG-231	ENST00000622045	TRAPPC8	Q9Y2L5	1435 aa		18.19	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms