RNA–Protein interactions for RNA: ENST00000621728.4

SEMA6C-210, Transcript of semaphorin 6C, humanhuman

TSL 1 (best) BASIC

Gene SEMA6C, Length 1,918 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-210ENST00000621728 ROCK2O75116 1388 aaKnown RBP26.32■■□□□ 1.8
SEMA6C-210ENST00000621728 EIF4G2P78344 907 aaKnown RBP eCLIP26.31■■□□□ 1.8
SEMA6C-210ENST00000621728 CARD11Q9BXL7 1154 aa26.31■■□□□ 1.8
SEMA6C-210ENST00000621728 STAG3Q9UJ98 1225 aa26.31■■□□□ 1.8
SEMA6C-210ENST00000621728 A2ML1A8K2U0 1454 aa26.3■■□□□ 1.8
SEMA6C-210ENST00000621728 NRXN1Q9ULB1 1477 aa26.29■■□□□ 1.8
SEMA6C-210ENST00000621728 RPGRIP1LQ68CZ1 1315 aa26.29■■□□□ 1.8
SEMA6C-210ENST00000621728 STAC3Q96MF2 364 aa26.28■■□□□ 1.8
SEMA6C-210ENST00000621728 USP47Q96K76 1375 aa26.27■■□□□ 1.8
SEMA6C-210ENST00000621728 SENP3Q9H4L4 574 aaPredicted RBP26.26■■□□□ 1.79
SEMA6C-210ENST00000621728 UBR1Q8IWV7 1749 aa26.25■■□□□ 1.79
SEMA6C-210ENST00000621728 GPRASP1Q5JY77 1395 aa26.24■■□□□ 1.79
SEMA6C-210ENST00000621728 CFAP70Q5T0N1 1121 aa26.24■■□□□ 1.79
SEMA6C-210ENST00000621728 PIK3C2GO75747 1445 aa26.23■■□□□ 1.79
SEMA6C-210ENST00000621728 KIAA1210Q9ULL0 1709 aa26.23■■□□□ 1.79
SEMA6C-210ENST00000621728 LAMC1P11047 1609 aa26.22■■□□□ 1.79
SEMA6C-210ENST00000621728 NLRP1Q9C000 1473 aa26.2■■□□□ 1.79
SEMA6C-210ENST00000621728 MYO3AQ8NEV4 1616 aa26.2■■□□□ 1.79
SEMA6C-210ENST00000621728 RIMS2Q9UQ26 1411 aa26.19■■□□□ 1.78
SEMA6C-210ENST00000621728 VGFO15240 615 aaPredicted RBP26.19■■□□□ 1.78
SEMA6C-210ENST00000621728 KDM5AP29375 1690 aaKnown RBP26.18■■□□□ 1.78
SEMA6C-210ENST00000621728 DIEXFQ68CQ4 756 aaKnown RBP26.18■■□□□ 1.78
SEMA6C-210ENST00000621728 ZFYVE9O95405 1425 aa26.16■■□□□ 1.78
SEMA6C-210ENST00000621728 IQGAP1P46940 1657 aa26.16■■□□□ 1.78
SEMA6C-210ENST00000621728 C11orf95C9JLR9 678 aaPredicted RBP26.15■■□□□ 1.78
SEMA6C-210ENST00000621728 ST20-MTHFSA0A0A6YYL1 179 aa26.14■■□□□ 1.78
SEMA6C-210ENST00000621728 PTPRMP28827 1452 aa26.14■■□□□ 1.77
SEMA6C-210ENST00000621728 C14orf93Q9H972 538 aaKnown RBP26.13■■□□□ 1.77
SEMA6C-210ENST00000621728 TMEM132EQ6IEE7 984 aa26.1■■□□□ 1.77
SEMA6C-210ENST00000621728 TMEM2Q9UHN6 1383 aa26.1■■□□□ 1.77
SEMA6C-210ENST00000621728 ADGRB1O14514 1584 aa26.1■■□□□ 1.77
SEMA6C-210ENST00000621728 WASHC2AQ641Q2 1341 aa26.1■■□□□ 1.77
SEMA6C-210ENST00000621728 CEP170BQ9Y4F5 1589 aaPredicted RBP26.09■■□□□ 1.77
SEMA6C-210ENST00000621728 SETBP1Q9Y6X0 1596 aa26.09■■□□□ 1.77
SEMA6C-210ENST00000621728 SCAF11Q99590 1463 aaKnown RBP26.08■■□□□ 1.77
SEMA6C-210ENST00000621728 ASXL1Q8IXJ9 1541 aa26.07■■□□□ 1.76
SEMA6C-210ENST00000621728 DDX10Q13206 875 aaKnown RBP26.07■■□□□ 1.76
SEMA6C-210ENST00000621728 POLR1AO95602 1720 aaPredicted RBP26.05■■□□□ 1.76
SEMA6C-210ENST00000621728 ALKQ9UM73 1620 aa26.05■■□□□ 1.76
SEMA6C-210ENST00000621728 NRXN3Q9Y4C0 1643 aa26.05■■□□□ 1.76
SEMA6C-210ENST00000621728 LTKP29376 864 aa26.04■■□□□ 1.76
SEMA6C-210ENST00000621728 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.04■■□□□ 1.76
SEMA6C-210ENST00000621728 CCDC7Q96M83 1385 aa26.03■■□□□ 1.76
SEMA6C-210ENST00000621728 ZNF142P52746 1687 aaPredicted RBP26.03■■□□□ 1.76
SEMA6C-210ENST00000621728 KIF7Q2M1P5 1343 aa26.02■■□□□ 1.76
SEMA6C-210ENST00000621728 SETD1AO15047 1707 aaKnown RBP26.02■■□□□ 1.76
SEMA6C-210ENST00000621728 SLIT1O75093 1534 aa26.02■■□□□ 1.76
SEMA6C-210ENST00000621728 SETD1BQ9UPS6 1966 aaKnown RBP26.01■■□□□ 1.76
SEMA6C-210ENST00000621728 ARHGAP23Q9P227 1491 aa26.01■■□□□ 1.75
SEMA6C-210ENST00000621728 TESK2Q96S53 571 aa26■■□□□ 1.75
SEMA6C-210ENST00000621728 TRAK1Q9UPV9 953 aa26■■□□□ 1.75
SEMA6C-210ENST00000621728 KDM4FA0A1W2PPD8 638 aa25.99■■□□□ 1.75
SEMA6C-210ENST00000621728 THEMISQ8N1K5 641 aaPredicted RBP25.99■■□□□ 1.75
SEMA6C-210ENST00000621728 TXNDC2Q86VQ3 553 aa25.98■■□□□ 1.75
SEMA6C-210ENST00000621728 HDGFP51858 240 aaKnown RBP25.97■■□□□ 1.75
SEMA6C-210ENST00000621728 POLR3GLQ9BT43 218 aa25.97■■□□□ 1.75
SEMA6C-210ENST00000621728 STK26Q9P289 416 aa25.96■■□□□ 1.75
SEMA6C-210ENST00000621728 ARHGEF28Q8N1W1 1705 aaKnown RBP25.95■■□□□ 1.74
SEMA6C-210ENST00000621728 BCANQ96GW7 911 aa25.95■■□□□ 1.74
SEMA6C-210ENST00000621728 EIF3AQ14152 1382 aaKnown RBP25.95■■□□□ 1.74
SEMA6C-210ENST00000621728 DISP3Q9P2K9 1392 aa25.95■■□□□ 1.74
SEMA6C-210ENST00000621728 EID1Q9Y6B2 187 aa25.93■■□□□ 1.74
SEMA6C-210ENST00000621728 PLEKHG1Q9ULL1 1385 aa25.92■■□□□ 1.74
SEMA6C-210ENST00000621728 YTHDC2Q9H6S0 1430 aaKnown RBP25.92■■□□□ 1.74
SEMA6C-210ENST00000621728 METP08581 1390 aa25.91■■□□□ 1.74
SEMA6C-210ENST00000621728 ADAMTS13Q76LX8 1427 aa25.91■■□□□ 1.74
SEMA6C-210ENST00000621728 QRICH2Q9H0J4 1663 aa25.9■■□□□ 1.74
SEMA6C-210ENST00000621728 CENPJQ9HC77 1338 aaPredicted RBP25.88■■□□□ 1.73
SEMA6C-210ENST00000621728 MIER1Q8N108 512 aa25.87■■□□□ 1.73
SEMA6C-210ENST00000621728 SLC26A8Q96RN1 970 aa25.87■■□□□ 1.73
SEMA6C-210ENST00000621728 TMF1P82094 1093 aa25.86■■□□□ 1.73
SEMA6C-210ENST00000621728 SAFB2Q14151 953 aaKnown RBP eCLIP25.84■■□□□ 1.73
SEMA6C-210ENST00000621728 MED14O60244 1454 aa25.83■■□□□ 1.73
SEMA6C-210ENST00000621728 LRPPRCP42704 1394 aaKnown RBP25.83■■□□□ 1.72
SEMA6C-210ENST00000621728 PRAM1Q96QH2 718 aa25.8■■□□□ 1.72
SEMA6C-210ENST00000621728 ANKLE2Q86XL3 938 aa25.8■■□□□ 1.72
SEMA6C-210ENST00000621728 SBNO2Q9Y2G9 1366 aa25.78■■□□□ 1.72
SEMA6C-210ENST00000621728 PLEKHH1Q9ULM0 1364 aa25.77■■□□□ 1.72
SEMA6C-210ENST00000621728 PTPRUQ92729 1446 aa25.77■■□□□ 1.72
SEMA6C-210ENST00000621728 DLC1Q96QB1 1528 aa25.77■■□□□ 1.72
SEMA6C-210ENST00000621728 KNDC1Q76NI1 1749 aa25.77■■□□□ 1.72
SEMA6C-210ENST00000621728 WAPLQ7Z5K2 1190 aa25.76■■□□□ 1.72
SEMA6C-210ENST00000621728 ABCC11Q96J66 1382 aa25.76■■□□□ 1.71
SEMA6C-210ENST00000621728 POGKQ9P215 609 aa25.76■■□□□ 1.71
SEMA6C-210ENST00000621728 NCKAP5LQ9HCH0 1330 aa25.75■■□□□ 1.71
SEMA6C-210ENST00000621728 TULP4Q9NRJ4 1543 aa25.74■■□□□ 1.71
SEMA6C-210ENST00000621728 DIP2AQ14689 1571 aa25.74■■□□□ 1.71
SEMA6C-210ENST00000621728 TBX22Q9Y458 520 aa25.74■■□□□ 1.71
SEMA6C-210ENST00000621728 MINK1Q8N4C8 1332 aaPredicted RBP25.73■■□□□ 1.71
SEMA6C-210ENST00000621728 MYOM1P52179 1685 aa25.73■■□□□ 1.71
SEMA6C-210ENST00000621728 CPS1P31327 1500 aa25.72■■□□□ 1.71
SEMA6C-210ENST00000621728 HSPA2P54652 639 aa25.72■■□□□ 1.71
SEMA6C-210ENST00000621728 TECPR2O15040 1411 aa25.71■■□□□ 1.71
SEMA6C-210ENST00000621728 ROBO2Q9HCK4 1378 aa25.7■■□□□ 1.7
SEMA6C-210ENST00000621728 NPHP4O75161 1426 aaPredicted RBP25.7■■□□□ 1.7
SEMA6C-210ENST00000621728 CDCA8Q53HL2 280 aa25.68■■□□□ 1.7
SEMA6C-210ENST00000621728 LMTK3Q96Q04 1460 aa25.68■■□□□ 1.7
SEMA6C-210ENST00000621728 AMOTL2Q9Y2J4 779 aa25.67■■□□□ 1.7
SEMA6C-210ENST00000621728 SLC24A1O60721 1099 aa25.66■■□□□ 1.7
SEMA6C-210ENST00000621728 XRN1Q8IZH2 1706 aaKnown RBP25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms