RNA–Protein interactions for RNA: ENST00000621526.4

CPNE3-211, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 279 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-211ENST00000621526 MYO5CQ9NQX4 1742 aa3.9□□□□□ -1.78
CPNE3-211ENST00000621526 STRCP1A6NGW2 1772 aa3.9□□□□□ -1.79
CPNE3-211ENST00000621526 PSDA5PKW4 1024 aaPredicted RBP3.9□□□□□ -1.79
CPNE3-211ENST00000621526 CHIC1Q5VXU3 224 aa3.9□□□□□ -1.79
CPNE3-211ENST00000621526 AMOTL2Q9Y2J4 779 aa3.9□□□□□ -1.79
CPNE3-211ENST00000621526 TET3O43151 1660 aa3.9□□□□□ -1.79
CPNE3-211ENST00000621526 SOS2Q07890 1332 aaPredicted RBP3.9□□□□□ -1.79
CPNE3-211ENST00000621526 MAP3K1Q13233 1512 aa3.9□□□□□ -1.79
CPNE3-211ENST00000621526 SETD1AO15047 1707 aaKnown RBP3.9□□□□□ -1.79
CPNE3-211ENST00000621526 PNPLA6Q8IY17 1366 aa3.89□□□□□ -1.79
CPNE3-211ENST00000621526 NWD1Q149M9 1564 aa3.89□□□□□ -1.79
CPNE3-211ENST00000621526 ATRNO75882 1429 aa3.89□□□□□ -1.79
CPNE3-211ENST00000621526 KRT27Q7Z3Y8 459 aa3.89□□□□□ -1.79
CPNE3-211ENST00000621526 UNC5CLQ8IV45 518 aa3.89□□□□□ -1.79
CPNE3-211ENST00000621526 SEPT12Q8IYM1 358 aa3.89□□□□□ -1.79
CPNE3-211ENST00000621526 GRWD1Q9BQ67 446 aaKnown RBP eCLIP3.89□□□□□ -1.79
CPNE3-211ENST00000621526 ERVK-7P63135 1459 aa3.89□□□□□ -1.79
CPNE3-211ENST00000621526 COL16A1Q07092 1604 aaPredicted RBP3.88□□□□□ -1.79
CPNE3-211ENST00000621526 PTCH1Q13635 1447 aa3.88□□□□□ -1.79
CPNE3-211ENST00000621526 CASKIN1Q8WXD9 1431 aa3.88□□□□□ -1.79
CPNE3-211ENST00000621526 CCDC18Q5T9S5 1454 aa3.88□□□□□ -1.79
CPNE3-211ENST00000621526 BCL9LQ86UU0 1499 aa3.88□□□□□ -1.79
CPNE3-211ENST00000621526 POLR1AO95602 1720 aaPredicted RBP3.88□□□□□ -1.79
CPNE3-211ENST00000621526 R3HDM1Q15032 1099 aaKnown RBP3.88□□□□□ -1.79
CPNE3-211ENST00000621526 AHDC1Q5TGY3 1603 aaPredicted RBP3.88□□□□□ -1.79
CPNE3-211ENST00000621526 PLEKHG1Q9ULL1 1385 aa3.88□□□□□ -1.79
CPNE3-211ENST00000621526 DCCP43146 1447 aa3.87□□□□□ -1.79
CPNE3-211ENST00000621526 SUPT6HQ7KZ85 1726 aaKnown RBP3.87□□□□□ -1.79
CPNE3-211ENST00000621526 CDC42BPBQ9Y5S2 1711 aa3.87□□□□□ -1.79
CPNE3-211ENST00000621526 SYCP2Q9BX26 1530 aa3.87□□□□□ -1.79
CPNE3-211ENST00000621526 KCNQ2O43526 872 aa3.87□□□□□ -1.79
CPNE3-211ENST00000621526 EN1Q05925 392 aaPredicted RBP3.87□□□□□ -1.79
CPNE3-211ENST00000621526 VPS72Q15906 364 aa3.87□□□□□ -1.79
CPNE3-211ENST00000621526 NBPF8Q3BBV2 869 aa3.87□□□□□ -1.79
CPNE3-211ENST00000621526 NBPF14Q5TI25 921 aa3.87□□□□□ -1.79
CPNE3-211ENST00000621526 CAMKK2Q96RR4 588 aa3.87□□□□□ -1.79
CPNE3-211ENST00000621526 SPON1Q9HCB6 807 aa3.87□□□□□ -1.79
CPNE3-211ENST00000621526 PCDH10Q9P2E7 1040 aa3.87□□□□□ -1.79
CPNE3-211ENST00000621526 ZC3H13Q5T200 1668 aaKnown RBP3.87□□□□□ -1.79
CPNE3-211ENST00000621526 PHLPP1O60346 1717 aa3.87□□□□□ -1.79
CPNE3-211ENST00000621526 CAMSAP2Q08AD1 1489 aa3.86□□□□□ -1.79
CPNE3-211ENST00000621526 LRP5O75197 1615 aa3.86□□□□□ -1.79
CPNE3-211ENST00000621526 MROH1Q8NDA8 1641 aa3.86□□□□□ -1.79
CPNE3-211ENST00000621526 DDX17Q92841 729 aaKnown RBP3.86□□□□□ -1.79
CPNE3-211ENST00000621526 ITSN2Q9NZM3 1697 aa3.86□□□□□ -1.79
CPNE3-211ENST00000621526 EP400Q96L91 3159 aa3.86□□□□□ -1.79
CPNE3-211ENST00000621526 INO80Q9ULG1 1556 aaPredicted RBP3.85□□□□□ -1.79
CPNE3-211ENST00000621526 PREX2Q70Z35 1606 aa3.85□□□□□ -1.79
CPNE3-211ENST00000621526 PPP1R1BQ9UD71 204 aaPredicted RBP3.85□□□□□ -1.79
CPNE3-211ENST00000621526 NINLQ9Y2I6 1382 aa3.85□□□□□ -1.79
CPNE3-211ENST00000621526 RALGAPBQ86X10 1494 aa3.85□□□□□ -1.79
CPNE3-211ENST00000621526 TIAM1Q13009 1591 aa3.85□□□□□ -1.79
CPNE3-211ENST00000621526 DIP2AQ14689 1571 aa3.85□□□□□ -1.79
CPNE3-211ENST00000621526 NHSL1Q5SYE7 1610 aa3.84□□□□□ -1.79
CPNE3-211ENST00000621526 SHPRHQ149N8 1683 aa3.84□□□□□ -1.79
CPNE3-211ENST00000621526 XIRP1Q702N8 1843 aaKnown RBP3.84□□□□□ -1.79
CPNE3-211ENST00000621526 EZH2Q15910 746 aaKnown RBP3.84□□□□□ -1.79
CPNE3-211ENST00000621526 FAM196AQ6ZSG2 479 aa3.84□□□□□ -1.79
CPNE3-211ENST00000621526 ORAI2Q96SN7 254 aa3.84□□□□□ -1.79
CPNE3-211ENST00000621526 KANK1Q14678 1352 aa3.84□□□□□ -1.79
CPNE3-211ENST00000621526 PARD3Q8TEW0 1356 aa3.84□□□□□ -1.79
CPNE3-211ENST00000621526 MST1RQ04912 1400 aa3.84□□□□□ -1.79
CPNE3-211ENST00000621526 ADGBQ8N7X0 1667 aa3.84□□□□□ -1.8
CPNE3-211ENST00000621526 FAM83GA6ND36 823 aa3.83□□□□□ -1.8
CPNE3-211ENST00000621526 GIGYF1O75420 1035 aaPredicted RBP3.83□□□□□ -1.8
CPNE3-211ENST00000621526 SLC34A2O95436 690 aa3.83□□□□□ -1.8
CPNE3-211ENST00000621526 EHMT2Q96KQ7 1210 aa3.83□□□□□ -1.8
CPNE3-211ENST00000621526 NPHP3Q7Z494 1330 aa3.83□□□□□ -1.8
CPNE3-211ENST00000621526 DISP2A7MBM2 1401 aa3.83□□□□□ -1.8
CPNE3-211ENST00000621526 NOS1P29475 1434 aa3.83□□□□□ -1.8
CPNE3-211ENST00000621526 CCDC141Q6ZP82 1450 aa3.83□□□□□ -1.8
CPNE3-211ENST00000621526 EFCAB6Q5THR3 1501 aa3.83□□□□□ -1.8
CPNE3-211ENST00000621526 CEP350Q5VT06 3117 aa3.83□□□□□ -1.8
CPNE3-211ENST00000621526 ASXL1Q8IXJ9 1541 aa3.82□□□□□ -1.8
CPNE3-211ENST00000621526 ZFYVE9O95405 1425 aa3.82□□□□□ -1.8
CPNE3-211ENST00000621526 CEP162Q5TB80 1403 aa3.82□□□□□ -1.8
CPNE3-211ENST00000621526 ADAMTS13Q76LX8 1427 aa3.82□□□□□ -1.8
CPNE3-211ENST00000621526 RIMS2Q9UQ26 1411 aa3.82□□□□□ -1.8
CPNE3-211ENST00000621526 LRPPRCP42704 1394 aaKnown RBP3.82□□□□□ -1.8
CPNE3-211ENST00000621526 C11orf95C9JLR9 678 aaPredicted RBP3.82□□□□□ -1.8
CPNE3-211ENST00000621526 APBA3O96018 575 aa3.82□□□□□ -1.8
CPNE3-211ENST00000621526 RRP7BPQ9NSQ0 103 aa3.82□□□□□ -1.8
CPNE3-211ENST00000621526 UBR1Q8IWV7 1749 aa3.81□□□□□ -1.8
CPNE3-211ENST00000621526 SLIT2O94813 1529 aa3.81□□□□□ -1.8
CPNE3-211ENST00000621526 C1orf167Q5SNV9 1468 aa3.81□□□□□ -1.8
CPNE3-211ENST00000621526 RPRD2Q5VT52 1461 aaKnown RBP3.81□□□□□ -1.8
CPNE3-211ENST00000621526 FOXO3O43524 673 aa3.81□□□□□ -1.8
CPNE3-211ENST00000621526 SYT17Q9BSW7 474 aa3.81□□□□□ -1.8
CPNE3-211ENST00000621526 MAST1Q9Y2H9 1570 aa3.8□□□□□ -1.8
CPNE3-211ENST00000621526 MYOM2P54296 1465 aa3.8□□□□□ -1.8
CPNE3-211ENST00000621526 PTPRUQ92729 1446 aa3.8□□□□□ -1.8
CPNE3-211ENST00000621526 SPATA31A3Q5VYP0 1347 aa3.8□□□□□ -1.8
CPNE3-211ENST00000621526 PLSCR1O15162 318 aa3.8□□□□□ -1.8
CPNE3-211ENST00000621526 HSPA6P17066 643 aa3.8□□□□□ -1.8
CPNE3-211ENST00000621526 PRELPP51888 382 aa3.8□□□□□ -1.8
CPNE3-211ENST00000621526 PSME1Q06323 249 aa3.8□□□□□ -1.8
CPNE3-211ENST00000621526 ESCO1Q5FWF5 840 aa3.8□□□□□ -1.8
CPNE3-211ENST00000621526 CCDC9Q9Y3X0 531 aaKnown RBP3.8□□□□□ -1.8
CPNE3-211ENST00000621526 KDM5AP29375 1690 aaKnown RBP3.8□□□□□ -1.8
CPNE3-211ENST00000621526 UNC13BO14795 1591 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms