RNA–Protein interactions for RNA: ENST00000621152.4

SMC6-210, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 3

Gene SMC6, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-210ENST00000621152 RIMS2Q9UQ26 1411 aa30.98■■■□□ 2.55
SMC6-210ENST00000621152 DISP3Q9P2K9 1392 aa30.97■■■□□ 2.55
SMC6-210ENST00000621152 HSPA1LP34931 641 aa30.97■■■□□ 2.55
SMC6-210ENST00000621152 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.97■■■□□ 2.55
SMC6-210ENST00000621152 NUTM2DQ5VT03 806 aaPredicted RBP30.96■■■□□ 2.55
SMC6-210ENST00000621152 NAIPQ13075 1403 aa30.96■■■□□ 2.55
SMC6-210ENST00000621152 ZFYVE9O95405 1425 aa30.94■■■□□ 2.54
SMC6-210ENST00000621152 PROSER2Q86WR7 435 aaPredicted RBP30.94■■■□□ 2.54
SMC6-210ENST00000621152 TRIM52Q96A61 297 aa30.94■■■□□ 2.54
SMC6-210ENST00000621152 TMEM131LA2VDJ0 1609 aa30.94■■■□□ 2.54
SMC6-210ENST00000621152 PLEKHG1Q9ULL1 1385 aa30.91■■■□□ 2.54
SMC6-210ENST00000621152 RBM33Q96EV2 1170 aaKnown RBP30.89■■■□□ 2.54
SMC6-210ENST00000621152 MYO5BQ9ULV0 1848 aa30.89■■■□□ 2.53
SMC6-210ENST00000621152 TBX22Q9Y458 520 aa30.88■■■□□ 2.53
SMC6-210ENST00000621152 TMEM94Q12767 1356 aa30.86■■■□□ 2.53
SMC6-210ENST00000621152 ALKQ9UM73 1620 aa30.86■■■□□ 2.53
SMC6-210ENST00000621152 HFM1A2PYH4 1435 aa30.83■■■□□ 2.53
SMC6-210ENST00000621152 ZNF326Q5BKZ1 582 aaKnown RBP30.83■■■□□ 2.53
SMC6-210ENST00000621152 SLC4A1APQ9BWU0 796 aaKnown RBP30.8■■■□□ 2.52
SMC6-210ENST00000621152 ILDR2Q71H61 639 aa30.77■■■□□ 2.52
SMC6-210ENST00000621152 XIRP1Q702N8 1843 aaKnown RBP30.75■■■□□ 2.51
SMC6-210ENST00000621152 ADAMTS13Q76LX8 1427 aa30.74■■■□□ 2.51
SMC6-210ENST00000621152 SPHKAPQ2M3C7 1700 aa30.74■■■□□ 2.51
SMC6-210ENST00000621152 NKTRP30414 1462 aaKnown RBP30.72■■■□□ 2.51
SMC6-210ENST00000621152 NWD1Q149M9 1564 aa30.7■■■□□ 2.5
SMC6-210ENST00000621152 MSH6P52701 1360 aa30.68■■■□□ 2.5
SMC6-210ENST00000621152 AMOTL2Q9Y2J4 779 aa30.68■■■□□ 2.5
SMC6-210ENST00000621152 PIK3R4Q99570 1358 aa30.67■■■□□ 2.5
SMC6-210ENST00000621152 C14orf37Q86TY3 774 aa30.67■■■□□ 2.5
SMC6-210ENST00000621152 CHD2O14647 1828 aaKnown RBP30.67■■■□□ 2.5
SMC6-210ENST00000621152 FAM135BQ49AJ0 1406 aa30.66■■■□□ 2.5
SMC6-210ENST00000621152 TRPM2O94759 1503 aa30.65■■■□□ 2.5
SMC6-210ENST00000621152 FOXD1Q16676 465 aa30.65■■■□□ 2.5
SMC6-210ENST00000621152 SLAIN2Q9P270 581 aa30.64■■■□□ 2.5
SMC6-210ENST00000621152 CLTCL1P53675 1640 aa30.64■■■□□ 2.5
SMC6-210ENST00000621152 MPHOSPH9Q99550 1183 aa30.61■■■□□ 2.49
SMC6-210ENST00000621152 DIP2AQ14689 1571 aa30.61■■■□□ 2.49
SMC6-210ENST00000621152 PTPRUQ92729 1446 aa30.58■■■□□ 2.49
SMC6-210ENST00000621152 NCOA3Q9Y6Q9 1424 aa30.58■■■□□ 2.49
SMC6-210ENST00000621152 VGFO15240 615 aaPredicted RBP30.58■■■□□ 2.49
SMC6-210ENST00000621152 C19orf44Q9H6X5 657 aa30.58■■■□□ 2.49
SMC6-210ENST00000621152 METP08581 1390 aa30.54■■■□□ 2.48
SMC6-210ENST00000621152 RPGRIP1LQ68CZ1 1315 aa30.54■■■□□ 2.48
SMC6-210ENST00000621152 ATF3P18847 181 aa30.54■■■□□ 2.48
SMC6-210ENST00000621152 KIF1BO60333 1816 aa30.54■■■□□ 2.48
SMC6-210ENST00000621152 CADPS2Q86UW7 1296 aa30.53■■■□□ 2.48
SMC6-210ENST00000621152 SETBP1Q9Y6X0 1596 aa30.53■■■□□ 2.48
SMC6-210ENST00000621152 NEXMIFQ5QGS0 1516 aa30.52■■■□□ 2.48
SMC6-210ENST00000621152 MED1Q15648 1581 aaPredicted RBP30.52■■■□□ 2.48
SMC6-210ENST00000621152 PHF23Q9BUL5 403 aaPredicted RBP30.51■■■□□ 2.47
SMC6-210ENST00000621152 SETD5Q9C0A6 1442 aa30.5■■■□□ 2.47
SMC6-210ENST00000621152 NRXN3Q9Y4C0 1643 aa30.5■■■□□ 2.47
SMC6-210ENST00000621152 ACIN1Q9UKV3 1341 aaKnown RBP30.49■■■□□ 2.47
SMC6-210ENST00000621152 SOCS7O14512 581 aa30.49■■■□□ 2.47
SMC6-210ENST00000621152 RGL3Q3MIN7 710 aa30.48■■■□□ 2.47
SMC6-210ENST00000621152 ROBO1Q9Y6N7 1651 aa30.48■■■□□ 2.47
SMC6-210ENST00000621152 CCDC144AA2RUR9 1427 aa30.44■■■□□ 2.46
SMC6-210ENST00000621152 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.4■■■□□ 2.46
SMC6-210ENST00000621152 XRN1Q8IZH2 1706 aaKnown RBP30.37■■■□□ 2.45
SMC6-210ENST00000621152 RAB3GAP2Q9H2M9 1393 aa30.37■■■□□ 2.45
SMC6-210ENST00000621152 ADGRF5Q8IZF2 1346 aa30.36■■■□□ 2.45
SMC6-210ENST00000621152 BRINP3Q76B58 766 aa30.33■■■□□ 2.45
SMC6-210ENST00000621152 SPATA31E1Q6ZUB1 1445 aa30.32■■■□□ 2.44
SMC6-210ENST00000621152 DCCP43146 1447 aa30.3■■■□□ 2.44
SMC6-210ENST00000621152 PHLPP1O60346 1717 aa30.3■■■□□ 2.44
SMC6-210ENST00000621152 ANKRD30BQ9BXX2 1392 aa30.29■■■□□ 2.44
SMC6-210ENST00000621152 JCADQ9P266 1359 aa30.29■■■□□ 2.44
SMC6-210ENST00000621152 PPLO60437 1756 aa30.29■■■□□ 2.44
SMC6-210ENST00000621152 RGS17Q9UGC6 210 aaPredicted RBP30.29■■■□□ 2.44
SMC6-210ENST00000621152 ROBO2Q9HCK4 1378 aa30.28■■■□□ 2.44
SMC6-210ENST00000621152 ADGRL3Q9HAR2 1447 aa30.27■■■□□ 2.44
SMC6-210ENST00000621152 STK26Q9P289 416 aa30.25■■■□□ 2.43
SMC6-210ENST00000621152 MST1RQ04912 1400 aa30.24■■■□□ 2.43
SMC6-210ENST00000621152 TMEM132EQ6IEE7 984 aa30.23■■■□□ 2.43
SMC6-210ENST00000621152 HRCP23327 699 aa30.22■■■□□ 2.43
SMC6-210ENST00000621152 SETD1AO15047 1707 aaKnown RBP30.22■■■□□ 2.43
SMC6-210ENST00000621152 PTCH1Q13635 1447 aa30.22■■■□□ 2.43
SMC6-210ENST00000621152 COL16A1Q07092 1604 aaPredicted RBP30.19■■■□□ 2.42
SMC6-210ENST00000621152 AHDC1Q5TGY3 1603 aaPredicted RBP30.18■■■□□ 2.42
SMC6-210ENST00000621152 DDX17Q92841 729 aaKnown RBP30.17■■■□□ 2.42
SMC6-210ENST00000621152 WAPLQ7Z5K2 1190 aa30.16■■■□□ 2.42
SMC6-210ENST00000621152 SPATA31A6Q5VVP1 1343 aa30.16■■■□□ 2.42
SMC6-210ENST00000621152 POTEAQ6S8J7 498 aa30.15■■■□□ 2.42
SMC6-210ENST00000621152 C14orf93Q9H972 538 aaKnown RBP30.15■■■□□ 2.42
SMC6-210ENST00000621152 ASXL1Q8IXJ9 1541 aa30.15■■■□□ 2.42
SMC6-210ENST00000621152 PRAG1Q86YV5 1406 aa30.14■■■□□ 2.42
SMC6-210ENST00000621152 NALCNQ8IZF0 1738 aa30.14■■■□□ 2.42
SMC6-210ENST00000621152 LRRC59Q96AG4 307 aaKnown RBP30.14■■■□□ 2.42
SMC6-210ENST00000621152 ORAI2Q96SN7 254 aa30.14■■■□□ 2.42
SMC6-210ENST00000621152 LRPPRCP42704 1394 aaKnown RBP30.13■■■□□ 2.41
SMC6-210ENST00000621152 C1orf167Q5SNV9 1468 aa30.12■■■□□ 2.41
SMC6-210ENST00000621152 CFAP70Q5T0N1 1121 aa30.12■■■□□ 2.41
SMC6-210ENST00000621152 MEX3CQ5U5Q3 659 aaKnown RBP30.12■■■□□ 2.41
SMC6-210ENST00000621152 PIK3C2GO75747 1445 aa30.12■■■□□ 2.41
SMC6-210ENST00000621152 NUTM2BA6NNL0 878 aaPredicted RBP30.11■■■□□ 2.41
SMC6-210ENST00000621152 NUTM2EB1AL46 878 aaPredicted RBP30.11■■■□□ 2.41
SMC6-210ENST00000621152 NUTM2AQ8IVF1 878 aaPredicted RBP30.11■■■□□ 2.41
SMC6-210ENST00000621152 ABCC11Q96J66 1382 aa30.11■■■□□ 2.41
SMC6-210ENST00000621152 IFT172Q9UG01 1749 aa30.1■■■□□ 2.41
SMC6-210ENST00000621152 KDM2AQ9Y2K7 1162 aa30.08■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms