RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 NBPF14Q5TI25 921 aa8.76□□□□□ -1.01
COLCA1-205ENST00000620864 ATAD2BQ9ULI0 1458 aa8.76□□□□□ -1.01
COLCA1-205ENST00000620864 CHMP3Q9Y3E7 222 aa8.76□□□□□ -1.01
COLCA1-205ENST00000620864 SPDYE4A6NLX3 237 aa8.76□□□□□ -1.01
COLCA1-205ENST00000620864 DDX49Q9Y6V7 483 aaKnown RBP8.76□□□□□ -1.01
COLCA1-205ENST00000620864 LEKR1Q6ZMV7 388 aa8.76□□□□□ -1.01
COLCA1-205ENST00000620864 CCAR2Q8N163 923 aaKnown RBP8.76□□□□□ -1.01
COLCA1-205ENST00000620864 MROH2BQ7Z745 1585 aa8.76□□□□□ -1.01
COLCA1-205ENST00000620864 GORABQ5T7V8 394 aa8.76□□□□□ -1.01
COLCA1-205ENST00000620864 CCDC39Q9UFE4 941 aa8.76□□□□□ -1.01
COLCA1-205ENST00000620864 TSHZ2Q9NRE2 1034 aa8.75□□□□□ -1.01
COLCA1-205ENST00000620864 NEFHP12036 1026 aa8.75□□□□□ -1.01
COLCA1-205ENST00000620864 LTV1Q96GA3 475 aaPredicted RBP8.75□□□□□ -1.01
COLCA1-205ENST00000620864 CCDC173Q0VFZ6 552 aa8.75□□□□□ -1.01
COLCA1-205ENST00000620864 MNS1Q8NEH6 495 aa8.75□□□□□ -1.01
COLCA1-205ENST00000620864 FAM13BQ9NYF5 915 aa8.75□□□□□ -1.01
COLCA1-205ENST00000620864 TOM1O60784 492 aa8.75□□□□□ -1.01
COLCA1-205ENST00000620864 LRRFIP1Q32MZ4 808 aaKnown RBP8.74□□□□□ -1.01
COLCA1-205ENST00000620864 HDGFL2Q7Z4V5 671 aaPredicted RBP8.74□□□□□ -1.01
COLCA1-205ENST00000620864 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.74□□□□□ -1.01
COLCA1-205ENST00000620864 CENPQQ7L2Z9 268 aaPredicted RBP8.74□□□□□ -1.01
COLCA1-205ENST00000620864 WWC1Q8IX03 1113 aa8.74□□□□□ -1.01
COLCA1-205ENST00000620864 DCAF11Q8TEB1 546 aa8.74□□□□□ -1.01
COLCA1-205ENST00000620864 HIRIP3Q9BW71 556 aaPredicted RBP8.74□□□□□ -1.01
COLCA1-205ENST00000620864 ZNF219Q9P2Y4 722 aaPredicted RBP8.74□□□□□ -1.01
COLCA1-205ENST00000620864 HOMER1Q86YM7 354 aa8.73□□□□□ -1.01
COLCA1-205ENST00000620864 ROCK2O75116 1388 aaKnown RBP8.73□□□□□ -1.01
COLCA1-205ENST00000620864 LETM1O95202 739 aaPredicted RBP8.73□□□□□ -1.01
COLCA1-205ENST00000620864 FAM161AQ3B820 660 aa8.73□□□□□ -1.01
COLCA1-205ENST00000620864 SYTL4Q96C24 671 aaPredicted RBP8.73□□□□□ -1.01
COLCA1-205ENST00000620864 CTDP1Q9Y5B0 961 aaPredicted RBP8.73□□□□□ -1.01
COLCA1-205ENST00000620864 AEBP1Q8IUX7 1158 aa8.73□□□□□ -1.01
COLCA1-205ENST00000620864 AQRO60306 1485 aaKnown RBP eCLIP8.73□□□□□ -1.01
COLCA1-205ENST00000620864 H3BQV1 296 aa8.73□□□□□ -1.01
COLCA1-205ENST00000620864 IFFO2Q5TF58 517 aa8.73□□□□□ -1.01
COLCA1-205ENST00000620864 FBXO3Q9UK99 471 aa8.73□□□□□ -1.01
COLCA1-205ENST00000620864 LMTK3Q96Q04 1460 aa8.73□□□□□ -1.01
COLCA1-205ENST00000620864 ABCC8Q09428 1581 aa8.72□□□□□ -1.01
COLCA1-205ENST00000620864 MFAP1P55081 439 aaKnown RBP8.72□□□□□ -1.01
COLCA1-205ENST00000620864 HOMEZQ8IX15 550 aa8.72□□□□□ -1.01
COLCA1-205ENST00000620864 NAT10Q9H0A0 1025 aaKnown RBP8.72□□□□□ -1.01
COLCA1-205ENST00000620864 STAC3Q96MF2 364 aa8.72□□□□□ -1.01
COLCA1-205ENST00000620864 CLEC11AQ9Y240 323 aa8.72□□□□□ -1.01
COLCA1-205ENST00000620864 MRE11P49959 708 aa8.72□□□□□ -1.01
COLCA1-205ENST00000620864 FHAD1B1AJZ9 1412 aa8.72□□□□□ -1.01
COLCA1-205ENST00000620864 DEF6Q9H4E7 631 aa8.72□□□□□ -1.01
COLCA1-205ENST00000620864 AAMPQ13685 434 aa8.71□□□□□ -1.01
COLCA1-205ENST00000620864 CPLX2Q6PUV4 134 aaKnown RBP8.71□□□□□ -1.01
COLCA1-205ENST00000620864 NUCB2P80303 420 aa8.71□□□□□ -1.01
COLCA1-205ENST00000620864 ITPRIPQ8IWB1 547 aa8.71□□□□□ -1.01
COLCA1-205ENST00000620864 LMOD3Q0VAK6 560 aa8.71□□□□□ -1.01
COLCA1-205ENST00000620864 RRP9O43818 475 aaKnown RBP8.71□□□□□ -1.02
COLCA1-205ENST00000620864 CEP162Q5TB80 1403 aa8.71□□□□□ -1.02
COLCA1-205ENST00000620864 MARCH6O60337 910 aa8.7□□□□□ -1.02
COLCA1-205ENST00000620864 KIAA0754O94854 1291 aa8.7□□□□□ -1.02
COLCA1-205ENST00000620864 CHMP5Q9NZZ3 219 aa8.7□□□□□ -1.02
COLCA1-205ENST00000620864 WIZO95785 1651 aa8.7□□□□□ -1.02
COLCA1-205ENST00000620864 PSME1Q06323 249 aa8.7□□□□□ -1.02
COLCA1-205ENST00000620864 EIF3AQ14152 1382 aaKnown RBP8.7□□□□□ -1.02
COLCA1-205ENST00000620864 REC8O95072 547 aa8.7□□□□□ -1.02
COLCA1-205ENST00000620864 ZNF592Q92610 1267 aa8.7□□□□□ -1.02
COLCA1-205ENST00000620864 MORC1Q86VD1 984 aa8.7□□□□□ -1.02
COLCA1-205ENST00000620864 PDCL2Q8N4E4 241 aa8.7□□□□□ -1.02
COLCA1-205ENST00000620864 FAM184AQ8NB25 1140 aa8.7□□□□□ -1.02
COLCA1-205ENST00000620864 TCEAL9Q9UHQ7 104 aa8.7□□□□□ -1.02
COLCA1-205ENST00000620864 TXLNBQ8N3L3 684 aa8.7□□□□□ -1.02
COLCA1-205ENST00000620864 TRIM34Q9BYJ4 488 aa8.7□□□□□ -1.02
COLCA1-205ENST00000620864 RAD21O60216 631 aa8.69□□□□□ -1.02
COLCA1-205ENST00000620864 PROSER2Q86WR7 435 aaPredicted RBP8.69□□□□□ -1.02
COLCA1-205ENST00000620864 STK31Q9BXU1 1019 aa8.69□□□□□ -1.02
COLCA1-205ENST00000620864 PES1O00541 588 aaKnown RBP8.69□□□□□ -1.02
COLCA1-205ENST00000620864 DYDC1Q8WWB3 177 aa8.69□□□□□ -1.02
COLCA1-205ENST00000620864 ANKRD18AQ8IVF6 992 aa8.69□□□□□ -1.02
COLCA1-205ENST00000620864 NGEFQ8N5V2 710 aa8.69□□□□□ -1.02
COLCA1-205ENST00000620864 RABEP1Q15276 862 aa8.69□□□□□ -1.02
COLCA1-205ENST00000620864 MRC2Q9UBG0 1479 aa8.69□□□□□ -1.02
COLCA1-205ENST00000620864 NESP48681 1621 aa8.68□□□□□ -1.02
COLCA1-205ENST00000620864 TRIM6-TRIM34B2RNG4 842 aa8.68□□□□□ -1.02
COLCA1-205ENST00000620864 KIF7Q2M1P5 1343 aa8.68□□□□□ -1.02
COLCA1-205ENST00000620864 EIF3JO75822 258 aaKnown RBP8.68□□□□□ -1.02
COLCA1-205ENST00000620864 UBE2Q2Q8WVN8 375 aa8.68□□□□□ -1.02
COLCA1-205ENST00000620864 AMPHP49418 695 aa8.68□□□□□ -1.02
COLCA1-205ENST00000620864 APBB1O00213 710 aa8.68□□□□□ -1.02
COLCA1-205ENST00000620864 AKAP17AQ02040 695 aaKnown RBP8.68□□□□□ -1.02
COLCA1-205ENST00000620864 CC2D1BQ5T0F9 858 aaKnown RBP8.68□□□□□ -1.02
COLCA1-205ENST00000620864 RUFY2Q8WXA3 655 aa8.68□□□□□ -1.02
COLCA1-205ENST00000620864 TMEM87AQ8NBN3 555 aa8.67□□□□□ -1.02
COLCA1-205ENST00000620864 WASHC2AQ641Q2 1341 aa8.67□□□□□ -1.02
COLCA1-205ENST00000620864 ERLIN2O94905 339 aa8.67□□□□□ -1.02
COLCA1-205ENST00000620864 SASS6Q6UVJ0 657 aa8.67□□□□□ -1.02
COLCA1-205ENST00000620864 RNF20Q5VTR2 975 aa8.67□□□□□ -1.02
COLCA1-205ENST00000620864 CREBRFQ8IUR6 639 aa8.67□□□□□ -1.02
COLCA1-205ENST00000620864 FBXW7Q969H0 707 aa8.67□□□□□ -1.02
COLCA1-205ENST00000620864 PRDM2Q13029 1718 aa8.67□□□□□ -1.02
COLCA1-205ENST00000620864 GAPVD1Q14C86 1478 aa8.67□□□□□ -1.02
COLCA1-205ENST00000620864 TNIKQ9UKE5 1360 aa8.67□□□□□ -1.02
COLCA1-205ENST00000620864 RBM25P49756 843 aaKnown RBP8.67□□□□□ -1.02
COLCA1-205ENST00000620864 TOMM22Q9NS69 142 aa8.67□□□□□ -1.02
COLCA1-205ENST00000620864 RAD54L2Q9Y4B4 1467 aa8.67□□□□□ -1.02
COLCA1-205ENST00000620864 FAM107BQ9H098 131 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms