RNA–Protein interactions for RNA: ENST00000620580.1

LINC00649-218, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 779 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-218ENST00000620580 GCC2Q8IWJ2 1684 aa17.36■□□□□ 0.37
LINC00649-218ENST00000620580 KCNA6P17658 529 aa17.35■□□□□ 0.37
LINC00649-218ENST00000620580 NUTM2DQ5VT03 806 aaPredicted RBP17.35■□□□□ 0.37
LINC00649-218ENST00000620580 ZFYVE9O95405 1425 aa17.34■□□□□ 0.37
LINC00649-218ENST00000620580 IQGAP3Q86VI3 1631 aa17.34■□□□□ 0.37
LINC00649-218ENST00000620580 RIMS2Q9UQ26 1411 aa17.34■□□□□ 0.37
LINC00649-218ENST00000620580 XIRP1Q702N8 1843 aaKnown RBP17.33■□□□□ 0.37
LINC00649-218ENST00000620580 TMEM131LA2VDJ0 1609 aa17.32■□□□□ 0.36
LINC00649-218ENST00000620580 RRBP1Q9P2E9 1410 aaKnown RBP17.32■□□□□ 0.36
LINC00649-218ENST00000620580 TMEM94Q12767 1356 aa17.32■□□□□ 0.36
LINC00649-218ENST00000620580 PPP1R15AO75807 674 aaPredicted RBP17.32■□□□□ 0.36
LINC00649-218ENST00000620580 PROSER2Q86WR7 435 aaPredicted RBP17.32■□□□□ 0.36
LINC00649-218ENST00000620580 PLEKHG1Q9ULL1 1385 aa17.29■□□□□ 0.36
LINC00649-218ENST00000620580 HDGFP51858 240 aaKnown RBP17.28■□□□□ 0.36
LINC00649-218ENST00000620580 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.26■□□□□ 0.35
LINC00649-218ENST00000620580 NAIPQ13075 1403 aa17.26■□□□□ 0.35
LINC00649-218ENST00000620580 TBX22Q9Y458 520 aa17.25■□□□□ 0.35
LINC00649-218ENST00000620580 ADAMTS13Q76LX8 1427 aa17.24■□□□□ 0.35
LINC00649-218ENST00000620580 SOCS7O14512 581 aa17.24■□□□□ 0.35
LINC00649-218ENST00000620580 NWD1Q149M9 1564 aa17.23■□□□□ 0.35
LINC00649-218ENST00000620580 MED1Q15648 1581 aaPredicted RBP17.23■□□□□ 0.35
LINC00649-218ENST00000620580 NKTRP30414 1462 aaKnown RBP17.22■□□□□ 0.35
LINC00649-218ENST00000620580 CHD2O14647 1828 aaKnown RBP17.21■□□□□ 0.35
LINC00649-218ENST00000620580 FAM135BQ49AJ0 1406 aa17.21■□□□□ 0.34
LINC00649-218ENST00000620580 ZNF326Q5BKZ1 582 aaKnown RBP17.2■□□□□ 0.34
LINC00649-218ENST00000620580 TRIM52Q96A61 297 aa17.2■□□□□ 0.34
LINC00649-218ENST00000620580 SPHKAPQ2M3C7 1700 aa17.19■□□□□ 0.34
LINC00649-218ENST00000620580 MSH6P52701 1360 aa17.18■□□□□ 0.34
LINC00649-218ENST00000620580 PTPRUQ92729 1446 aa17.17■□□□□ 0.34
LINC00649-218ENST00000620580 HFM1A2PYH4 1435 aa17.16■□□□□ 0.34
LINC00649-218ENST00000620580 SLAIN2Q9P270 581 aa17.16■□□□□ 0.34
LINC00649-218ENST00000620580 AMOTL2Q9Y2J4 779 aa17.16■□□□□ 0.34
LINC00649-218ENST00000620580 CLTCL1P53675 1640 aa17.16■□□□□ 0.34
LINC00649-218ENST00000620580 C14orf37Q86TY3 774 aa17.15■□□□□ 0.34
LINC00649-218ENST00000620580 PHF23Q9BUL5 403 aaPredicted RBP17.15■□□□□ 0.34
LINC00649-218ENST00000620580 ROBO1Q9Y6N7 1651 aa17.15■□□□□ 0.34
LINC00649-218ENST00000620580 SLC4A1APQ9BWU0 796 aaKnown RBP17.14■□□□□ 0.33
LINC00649-218ENST00000620580 PIK3R4Q99570 1358 aa17.14■□□□□ 0.33
LINC00649-218ENST00000620580 FOXD1Q16676 465 aa17.13■□□□□ 0.33
LINC00649-218ENST00000620580 NRXN3Q9Y4C0 1643 aa17.13■□□□□ 0.33
LINC00649-218ENST00000620580 TRPM2O94759 1503 aa17.12■□□□□ 0.33
LINC00649-218ENST00000620580 DIP2AQ14689 1571 aa17.12■□□□□ 0.33
LINC00649-218ENST00000620580 METP08581 1390 aa17.12■□□□□ 0.33
LINC00649-218ENST00000620580 C19orf44Q9H6X5 657 aa17.1■□□□□ 0.33
LINC00649-218ENST00000620580 RGS17Q9UGC6 210 aaPredicted RBP17.1■□□□□ 0.33
LINC00649-218ENST00000620580 NCOA3Q9Y6Q9 1424 aa17.09■□□□□ 0.33
LINC00649-218ENST00000620580 NEXMIFQ5QGS0 1516 aa17.09■□□□□ 0.33
LINC00649-218ENST00000620580 SETBP1Q9Y6X0 1596 aa17.09■□□□□ 0.33
LINC00649-218ENST00000620580 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.07■□□□□ 0.32
LINC00649-218ENST00000620580 ATF3P18847 181 aa17.07■□□□□ 0.32
LINC00649-218ENST00000620580 KIF1BO60333 1816 aa17.07■□□□□ 0.32
LINC00649-218ENST00000620580 CADPS2Q86UW7 1296 aa17.06■□□□□ 0.32
LINC00649-218ENST00000620580 XRN1Q8IZH2 1706 aaKnown RBP17.04■□□□□ 0.32
LINC00649-218ENST00000620580 PHLPP1O60346 1717 aa17.04■□□□□ 0.32
LINC00649-218ENST00000620580 MPHOSPH9Q99550 1183 aa17.03■□□□□ 0.32
LINC00649-218ENST00000620580 VGFO15240 615 aaPredicted RBP17.02■□□□□ 0.32
LINC00649-218ENST00000620580 BRINP3Q76B58 766 aa17.01■□□□□ 0.31
LINC00649-218ENST00000620580 RGL3Q3MIN7 710 aa17■□□□□ 0.31
LINC00649-218ENST00000620580 POTEAQ6S8J7 498 aa17■□□□□ 0.31
LINC00649-218ENST00000620580 JCADQ9P266 1359 aa17■□□□□ 0.31
LINC00649-218ENST00000620580 RPGRIP1LQ68CZ1 1315 aa16.99■□□□□ 0.31
LINC00649-218ENST00000620580 COL16A1Q07092 1604 aaPredicted RBP16.99■□□□□ 0.31
LINC00649-218ENST00000620580 MST1RQ04912 1400 aa16.97■□□□□ 0.31
LINC00649-218ENST00000620580 ROBO2Q9HCK4 1378 aa16.97■□□□□ 0.31
LINC00649-218ENST00000620580 ADGRF5Q8IZF2 1346 aa16.96■□□□□ 0.31
LINC00649-218ENST00000620580 SETD1AO15047 1707 aaKnown RBP16.96■□□□□ 0.31
LINC00649-218ENST00000620580 DDX17Q92841 729 aaKnown RBP16.96■□□□□ 0.31
LINC00649-218ENST00000620580 PPLO60437 1756 aa16.96■□□□□ 0.31
LINC00649-218ENST00000620580 CCDC144AA2RUR9 1427 aa16.96■□□□□ 0.3
LINC00649-218ENST00000620580 DCCP43146 1447 aa16.96■□□□□ 0.3
LINC00649-218ENST00000620580 ADGRL3Q9HAR2 1447 aa16.96■□□□□ 0.3
LINC00649-218ENST00000620580 AHDC1Q5TGY3 1603 aaPredicted RBP16.95■□□□□ 0.3
LINC00649-218ENST00000620580 SPATA31E1Q6ZUB1 1445 aa16.94■□□□□ 0.3
LINC00649-218ENST00000620580 SETD5Q9C0A6 1442 aa16.94■□□□□ 0.3
LINC00649-218ENST00000620580 LRP6O75581 1613 aa16.93■□□□□ 0.3
LINC00649-218ENST00000620580 ASXL1Q8IXJ9 1541 aa16.93■□□□□ 0.3
LINC00649-218ENST00000620580 NALCNQ8IZF0 1738 aa16.93■□□□□ 0.3
LINC00649-218ENST00000620580 PTCH1Q13635 1447 aa16.91■□□□□ 0.3
LINC00649-218ENST00000620580 NUTM2BA6NNL0 878 aaPredicted RBP16.9■□□□□ 0.3
LINC00649-218ENST00000620580 NUTM2EB1AL46 878 aaPredicted RBP16.9■□□□□ 0.3
LINC00649-218ENST00000620580 TMEM132EQ6IEE7 984 aa16.9■□□□□ 0.3
LINC00649-218ENST00000620580 NUTM2AQ8IVF1 878 aaPredicted RBP16.9■□□□□ 0.3
LINC00649-218ENST00000620580 STK26Q9P289 416 aa16.9■□□□□ 0.3
LINC00649-218ENST00000620580 SPATA31A6Q5VVP1 1343 aa16.9■□□□□ 0.3
LINC00649-218ENST00000620580 RAB3GAP2Q9H2M9 1393 aa16.89■□□□□ 0.3
LINC00649-218ENST00000620580 C1orf167Q5SNV9 1468 aa16.89■□□□□ 0.29
LINC00649-218ENST00000620580 MEX3CQ5U5Q3 659 aaKnown RBP16.89■□□□□ 0.29
LINC00649-218ENST00000620580 ORAI2Q96SN7 254 aa16.89■□□□□ 0.29
LINC00649-218ENST00000620580 WAPLQ7Z5K2 1190 aa16.87■□□□□ 0.29
LINC00649-218ENST00000620580 SHPRHQ149N8 1683 aa16.87■□□□□ 0.29
LINC00649-218ENST00000620580 ANKRD30BQ9BXX2 1392 aa16.87■□□□□ 0.29
LINC00649-218ENST00000620580 NHSL1Q5SYE7 1610 aa16.86■□□□□ 0.29
LINC00649-218ENST00000620580 LRRC59Q96AG4 307 aaKnown RBP16.86■□□□□ 0.29
LINC00649-218ENST00000620580 PRAG1Q86YV5 1406 aa16.86■□□□□ 0.29
LINC00649-218ENST00000620580 IFT172Q9UG01 1749 aa16.84■□□□□ 0.29
LINC00649-218ENST00000620580 PLEKHH1Q9ULM0 1364 aa16.84■□□□□ 0.29
LINC00649-218ENST00000620580 PIK3C2GO75747 1445 aa16.83■□□□□ 0.28
LINC00649-218ENST00000620580 LRPPRCP42704 1394 aaKnown RBP16.83■□□□□ 0.28
LINC00649-218ENST00000620580 PNPLA6Q8IY17 1366 aa16.82■□□□□ 0.28
LINC00649-218ENST00000620580 ACIN1Q9UKV3 1341 aaKnown RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms