RNA–Protein interactions for RNA: ENST00000620511.1

TRIO-224, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2 BASIC

Gene TRIO, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-224ENST00000620511 NCKAP5LQ9HCH0 1330 aa14.05□□□□□ -0.16
TRIO-224ENST00000620511 IFT172Q9UG01 1749 aa14.05□□□□□ -0.16
TRIO-224ENST00000620511 RIMS2Q9UQ26 1411 aa14.04□□□□□ -0.16
TRIO-224ENST00000620511 PPLO60437 1756 aa14.04□□□□□ -0.16
TRIO-224ENST00000620511 MED14O60244 1454 aa14.03□□□□□ -0.16
TRIO-224ENST00000620511 SCAF11Q99590 1463 aaKnown RBP14.02□□□□□ -0.17
TRIO-224ENST00000620511 RGL3Q3MIN7 710 aa14.01□□□□□ -0.17
TRIO-224ENST00000620511 TXNDC2Q86VQ3 553 aa14.01□□□□□ -0.17
TRIO-224ENST00000620511 ANKLE2Q86XL3 938 aa14.01□□□□□ -0.17
TRIO-224ENST00000620511 NUTM2DQ5VT03 806 aaPredicted RBP14□□□□□ -0.17
TRIO-224ENST00000620511 ZEB1P37275 1124 aaPredicted RBP14□□□□□ -0.17
TRIO-224ENST00000620511 ZNF326Q5BKZ1 582 aaKnown RBP14□□□□□ -0.17
TRIO-224ENST00000620511 RPGRIP1LQ68CZ1 1315 aa13.99□□□□□ -0.17
TRIO-224ENST00000620511 NRXN3Q9Y4C0 1643 aa13.99□□□□□ -0.17
TRIO-224ENST00000620511 IQGAP1P46940 1657 aa13.98□□□□□ -0.17
TRIO-224ENST00000620511 CLSPNQ9HAW4 1339 aa13.97□□□□□ -0.17
TRIO-224ENST00000620511 NPHP4O75161 1426 aaPredicted RBP13.97□□□□□ -0.17
TRIO-224ENST00000620511 NEUROD1Q13562 356 aa13.97□□□□□ -0.17
TRIO-224ENST00000620511 EID1Q9Y6B2 187 aa13.97□□□□□ -0.17
TRIO-224ENST00000620511 PLEKHG1Q9ULL1 1385 aa13.97□□□□□ -0.17
TRIO-224ENST00000620511 ADGRF5Q8IZF2 1346 aa13.97□□□□□ -0.17
TRIO-224ENST00000620511 NRXN1Q9ULB1 1477 aa13.96□□□□□ -0.17
TRIO-224ENST00000620511 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.96□□□□□ -0.17
TRIO-224ENST00000620511 ADAMTS13Q76LX8 1427 aa13.95□□□□□ -0.18
TRIO-224ENST00000620511 SETBP1Q9Y6X0 1596 aa13.95□□□□□ -0.18
TRIO-224ENST00000620511 MYOM2P54296 1465 aa13.95□□□□□ -0.18
TRIO-224ENST00000620511 SETD1AO15047 1707 aaKnown RBP13.95□□□□□ -0.18
TRIO-224ENST00000620511 CCER1Q8TC90 406 aaPredicted RBP13.95□□□□□ -0.18
TRIO-224ENST00000620511 L3MBTL2Q969R5 705 aa13.95□□□□□ -0.18
TRIO-224ENST00000620511 VGFO15240 615 aaPredicted RBP13.94□□□□□ -0.18
TRIO-224ENST00000620511 HDGFP51858 240 aaKnown RBP13.94□□□□□ -0.18
TRIO-224ENST00000620511 DCAF11Q8TEB1 546 aa13.94□□□□□ -0.18
TRIO-224ENST00000620511 PIK3C2GO75747 1445 aa13.93□□□□□ -0.18
TRIO-224ENST00000620511 PPP1R15AO75807 674 aaPredicted RBP13.92□□□□□ -0.18
TRIO-224ENST00000620511 SLC26A8Q96RN1 970 aa13.92□□□□□ -0.18
TRIO-224ENST00000620511 STRCP1A6NGW2 1772 aa13.91□□□□□ -0.18
TRIO-224ENST00000620511 KDM2AQ9Y2K7 1162 aa13.91□□□□□ -0.18
TRIO-224ENST00000620511 DMRT2Q9Y5R5 561 aa13.91□□□□□ -0.18
TRIO-224ENST00000620511 ALKQ9UM73 1620 aa13.91□□□□□ -0.18
TRIO-224ENST00000620511 TBX22Q9Y458 520 aa13.9□□□□□ -0.19
TRIO-224ENST00000620511 DIP2AQ14689 1571 aa13.89□□□□□ -0.19
TRIO-224ENST00000620511 STAC3Q96MF2 364 aa13.89□□□□□ -0.19
TRIO-224ENST00000620511 METP08581 1390 aa13.88□□□□□ -0.19
TRIO-224ENST00000620511 CHD2O14647 1828 aaKnown RBP13.88□□□□□ -0.19
TRIO-224ENST00000620511 ASXL1Q8IXJ9 1541 aa13.88□□□□□ -0.19
TRIO-224ENST00000620511 PRAG1Q86YV5 1406 aa13.88□□□□□ -0.19
TRIO-224ENST00000620511 ZNF335Q9H4Z2 1342 aaPredicted RBP13.87□□□□□ -0.19
TRIO-224ENST00000620511 PTPRUQ92729 1446 aa13.87□□□□□ -0.19
TRIO-224ENST00000620511 C14orf93Q9H972 538 aaKnown RBP13.86□□□□□ -0.19
TRIO-224ENST00000620511 TONSLQ96HA7 1378 aa13.86□□□□□ -0.19
TRIO-224ENST00000620511 LTBP4Q8N2S1 1624 aa13.86□□□□□ -0.19
TRIO-224ENST00000620511 NBPF8Q3BBV2 869 aa13.85□□□□□ -0.19
TRIO-224ENST00000620511 CFAP70Q5T0N1 1121 aa13.85□□□□□ -0.19
TRIO-224ENST00000620511 BCANQ96GW7 911 aa13.85□□□□□ -0.19
TRIO-224ENST00000620511 ADGRB1O14514 1584 aa13.85□□□□□ -0.19
TRIO-224ENST00000620511 KIAA1210Q9ULL0 1709 aa13.84□□□□□ -0.19
TRIO-224ENST00000620511 LAMC1P11047 1609 aa13.84□□□□□ -0.19
TRIO-224ENST00000620511 NWD1Q149M9 1564 aa13.84□□□□□ -0.19
TRIO-224ENST00000620511 TIMELESSQ9UNS1 1208 aa13.84□□□□□ -0.19
TRIO-224ENST00000620511 XRN1Q8IZH2 1706 aaKnown RBP13.84□□□□□ -0.19
TRIO-224ENST00000620511 PIK3R4Q99570 1358 aa13.83□□□□□ -0.2
TRIO-224ENST00000620511 TRPM1Q7Z4N2 1603 aa13.83□□□□□ -0.2
TRIO-224ENST00000620511 KCNA6P17658 529 aa13.82□□□□□ -0.2
TRIO-224ENST00000620511 NBPF1Q3BBV0 1214 aa13.82□□□□□ -0.2
TRIO-224ENST00000620511 TMEM132EQ6IEE7 984 aa13.82□□□□□ -0.2
TRIO-224ENST00000620511 XIRP1Q702N8 1843 aaKnown RBP13.81□□□□□ -0.2
TRIO-224ENST00000620511 AMOTL2Q9Y2J4 779 aa13.8□□□□□ -0.2
TRIO-224ENST00000620511 TECPR2O15040 1411 aa13.78□□□□□ -0.2
TRIO-224ENST00000620511 YTHDC2Q9H6S0 1430 aaKnown RBP13.78□□□□□ -0.2
TRIO-224ENST00000620511 LRRC7Q96NW7 1537 aa13.78□□□□□ -0.2
TRIO-224ENST00000620511 LRPPRCP42704 1394 aaKnown RBP13.78□□□□□ -0.2
TRIO-224ENST00000620511 KNDC1Q76NI1 1749 aa13.77□□□□□ -0.2
TRIO-224ENST00000620511 CPS1P31327 1500 aa13.77□□□□□ -0.21
TRIO-224ENST00000620511 ABCC11Q96J66 1382 aa13.77□□□□□ -0.21
TRIO-224ENST00000620511 ROBO2Q9HCK4 1378 aa13.77□□□□□ -0.21
TRIO-224ENST00000620511 NKTRP30414 1462 aaKnown RBP13.77□□□□□ -0.21
TRIO-224ENST00000620511 RALGAPBQ86X10 1494 aa13.76□□□□□ -0.21
TRIO-224ENST00000620511 RBM33Q96EV2 1170 aaKnown RBP13.75□□□□□ -0.21
TRIO-224ENST00000620511 GPRASP1Q5JY77 1395 aa13.75□□□□□ -0.21
TRIO-224ENST00000620511 PTCH1Q13635 1447 aa13.75□□□□□ -0.21
TRIO-224ENST00000620511 ADRA2BP18089 450 aa13.74□□□□□ -0.21
TRIO-224ENST00000620511 STK26Q9P289 416 aa13.74□□□□□ -0.21
TRIO-224ENST00000620511 ARHGEF28Q8N1W1 1705 aaKnown RBP13.74□□□□□ -0.21
TRIO-224ENST00000620511 PLEKHH1Q9ULM0 1364 aa13.73□□□□□ -0.21
TRIO-224ENST00000620511 DLC1Q96QB1 1528 aa13.73□□□□□ -0.21
TRIO-224ENST00000620511 TMEM94Q12767 1356 aa13.72□□□□□ -0.21
TRIO-224ENST00000620511 WAPLQ7Z5K2 1190 aa13.72□□□□□ -0.21
TRIO-224ENST00000620511 SIRT1Q96EB6 747 aa13.72□□□□□ -0.21
TRIO-224ENST00000620511 TRAK1Q9UPV9 953 aa13.72□□□□□ -0.21
TRIO-224ENST00000620511 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.72□□□□□ -0.21
TRIO-224ENST00000620511 ROCK2O75116 1388 aaKnown RBP13.71□□□□□ -0.21
TRIO-224ENST00000620511 FAM135BQ49AJ0 1406 aa13.71□□□□□ -0.21
TRIO-224ENST00000620511 PROSER2Q86WR7 435 aaPredicted RBP13.71□□□□□ -0.21
TRIO-224ENST00000620511 NALCNQ8IZF0 1738 aa13.71□□□□□ -0.22
TRIO-224ENST00000620511 CERKQ8TCT0 537 aa13.7□□□□□ -0.22
TRIO-224ENST00000620511 NCOA3Q9Y6Q9 1424 aa13.7□□□□□ -0.22
TRIO-224ENST00000620511 PRAM1Q96QH2 718 aa13.68□□□□□ -0.22
TRIO-224ENST00000620511 IQSEC2Q5JU85 1478 aa13.67□□□□□ -0.22
TRIO-224ENST00000620511 CARD11Q9BXL7 1154 aa13.66□□□□□ -0.22
TRIO-224ENST00000620511 ADGRL3Q9HAR2 1447 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms