RNA–Protein interactions for RNA: ENST00000620465.4

MALAT1-216, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 2

Gene MALAT1, Length 333 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-216ENST00000620465 BHMG1C9JSJ3 638 aaPredicted RBP7.52□□□□□ -1.21
MALAT1-216ENST00000620465 ANKRD13DQ6ZTN6 518 aa7.52□□□□□ -1.21
MALAT1-216ENST00000620465 MRPL50Q8N5N7 158 aaKnown RBP7.52□□□□□ -1.21
MALAT1-216ENST00000620465 HRO43593 1189 aa7.51□□□□□ -1.21
MALAT1-216ENST00000620465 SLC4A3P48751 1232 aa7.51□□□□□ -1.21
MALAT1-216ENST00000620465 HDGFP51858 240 aaKnown RBP7.51□□□□□ -1.21
MALAT1-216ENST00000620465 BEGAINQ9BUH8 593 aa7.51□□□□□ -1.21
MALAT1-216ENST00000620465 DDX11L8A8MPP1 907 aa7.5□□□□□ -1.21
MALAT1-216ENST00000620465 SWT1Q5T5J6 900 aaKnown RBP7.5□□□□□ -1.21
MALAT1-216ENST00000620465 POTEGQ6S5H5 508 aa7.5□□□□□ -1.21
MALAT1-216ENST00000620465 STAC3Q96MF2 364 aa7.5□□□□□ -1.21
MALAT1-216ENST00000620465 KRTAP3-3Q9BYR6 98 aa7.5□□□□□ -1.21
MALAT1-216ENST00000620465 KRTAP3-2Q9BYR7 98 aa7.5□□□□□ -1.21
MALAT1-216ENST00000620465 POTEMA6NI47 508 aa7.49□□□□□ -1.21
MALAT1-216ENST00000620465 ZFRQ96KR1 1074 aaKnown RBP7.49□□□□□ -1.21
MALAT1-216ENST00000620465 CD46P15529 392 aa7.48□□□□□ -1.21
MALAT1-216ENST00000620465 RSPH4AQ5TD94 716 aa7.48□□□□□ -1.21
MALAT1-216ENST00000620465 SAMD7Q7Z3H4 446 aa7.48□□□□□ -1.21
MALAT1-216ENST00000620465 SLF2Q8IX21 1173 aa7.48□□□□□ -1.21
MALAT1-216ENST00000620465 RDH13Q8NBN7 331 aa7.48□□□□□ -1.21
MALAT1-216ENST00000620465 GOLGA8CPA6NN73 597 aa7.47□□□□□ -1.21
MALAT1-216ENST00000620465 RNF40O75150 1001 aa7.46□□□□□ -1.22
MALAT1-216ENST00000620465 DIXDC1Q155Q3 683 aa7.46□□□□□ -1.22
MALAT1-216ENST00000620465 ANKK1Q8NFD2 765 aa7.46□□□□□ -1.22
MALAT1-216ENST00000620465 LRCH3Q96II8 777 aa7.46□□□□□ -1.22
MALAT1-216ENST00000620465 RSPH6AQ9H0K4 717 aa7.46□□□□□ -1.22
MALAT1-216ENST00000620465 GOPCQ9HD26 462 aa7.46□□□□□ -1.22
MALAT1-216ENST00000620465 SH3D19Q5HYK7 790 aa7.45□□□□□ -1.22
MALAT1-216ENST00000620465 CDAN1Q8IWY9 1227 aa7.45□□□□□ -1.22
MALAT1-216ENST00000620465 NUTM1Q86Y26 1132 aa7.44□□□□□ -1.22
MALAT1-216ENST00000620465 NECTIN2Q92692 538 aa7.44□□□□□ -1.22
MALAT1-216ENST00000620465 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.44□□□□□ -1.22
MALAT1-216ENST00000620465 SLC10A3P09131 477 aa7.43□□□□□ -1.22
MALAT1-216ENST00000620465 TBC1D2Q9BYX2 928 aa7.43□□□□□ -1.22
MALAT1-216ENST00000620465 CFHP08603 1231 aa7.42□□□□□ -1.22
MALAT1-216ENST00000620465 GCGRP47871 477 aa7.42□□□□□ -1.22
MALAT1-216ENST00000620465 MYSM1Q5VVJ2 828 aa7.42□□□□□ -1.22
MALAT1-216ENST00000620465 SPIRE2Q8WWL2 714 aa7.42□□□□□ -1.22
MALAT1-216ENST00000620465 WNT2BQ93097 391 aa7.42□□□□□ -1.22
MALAT1-216ENST00000620465 PCMTD1Q96MG8 357 aaPredicted RBP7.42□□□□□ -1.22
MALAT1-216ENST00000620465 SOWAHBA6NEL2 793 aa7.41□□□□□ -1.22
MALAT1-216ENST00000620465 KDM4AO75164 1064 aa7.41□□□□□ -1.22
MALAT1-216ENST00000620465 USP46P62068 366 aa7.41□□□□□ -1.22
MALAT1-216ENST00000620465 SKIV2LQ15477 1246 aaKnown RBP7.41□□□□□ -1.22
MALAT1-216ENST00000620465 GTF3C3Q9Y5Q9 886 aa7.41□□□□□ -1.22
MALAT1-216ENST00000620465 CLK2P49760 499 aaKnown RBP7.4□□□□□ -1.22
MALAT1-216ENST00000620465 BCAMP50895 628 aa7.4□□□□□ -1.22
MALAT1-216ENST00000620465 KMT5BQ4FZB7 885 aa7.39□□□□□ -1.23
MALAT1-216ENST00000620465 PRR14Q9BWN1 585 aa7.39□□□□□ -1.23
MALAT1-216ENST00000620465 HPS5Q9UPZ3 1129 aa7.39□□□□□ -1.23
MALAT1-216ENST00000620465 POLR3EQ9NVU0 708 aa7.38□□□□□ -1.23
MALAT1-216ENST00000620465 TSR3Q9UJK0 312 aaKnown RBP7.38□□□□□ -1.23
MALAT1-216ENST00000620465 MOXD2PA6NHM9 499 aa7.37□□□□□ -1.23
MALAT1-216ENST00000620465 HOXA2O43364 376 aa7.37□□□□□ -1.23
MALAT1-216ENST00000620465 GJA5P36382 358 aa7.37□□□□□ -1.23
MALAT1-216ENST00000620465 PPP4CP60510 307 aa7.37□□□□□ -1.23
MALAT1-216ENST00000620465 GRIPAP1Q4V328 841 aa7.37□□□□□ -1.23
MALAT1-216ENST00000620465 RSBN1LQ6PCB5 846 aaPredicted RBP7.37□□□□□ -1.23
MALAT1-216ENST00000620465 THSD4Q6ZMP0 1018 aa7.37□□□□□ -1.23
MALAT1-216ENST00000620465 RIC3Q7Z5B4 369 aa7.37□□□□□ -1.23
MALAT1-216ENST00000620465 ATP1B4Q9UN42 357 aaPredicted RBP7.37□□□□□ -1.23
MALAT1-216ENST00000620465 SPTLC1O15269 473 aa7.36□□□□□ -1.23
MALAT1-216ENST00000620465 FUT2Q10981 343 aa7.36□□□□□ -1.23
MALAT1-216ENST00000620465 KCTD12Q96CX2 325 aaKnown RBP7.36□□□□□ -1.23
MALAT1-216ENST00000620465 PCDH10Q9P2E7 1040 aa7.36□□□□□ -1.23
MALAT1-216ENST00000620465 LIMD1Q9UGP4 676 aa7.36□□□□□ -1.23
MALAT1-216ENST00000620465 ACTN4O43707 911 aaKnown RBP7.35□□□□□ -1.23
MALAT1-216ENST00000620465 NDUFV2P19404 249 aa7.35□□□□□ -1.23
MALAT1-216ENST00000620465 TUSC1Q2TAM9 212 aa7.35□□□□□ -1.23
MALAT1-216ENST00000620465 PROCA1Q8NCQ7 364 aaPredicted RBP7.35□□□□□ -1.23
MALAT1-216ENST00000620465 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.35□□□□□ -1.23
MALAT1-216ENST00000620465 ATP6V1AP38606 617 aa7.34□□□□□ -1.23
MALAT1-216ENST00000620465 FDX1P10109 184 aa7.33□□□□□ -1.24
MALAT1-216ENST00000620465 APLP1P51693 650 aa7.33□□□□□ -1.24
MALAT1-216ENST00000620465 WBP1LQ9NX94 342 aa7.33□□□□□ -1.24
MALAT1-216ENST00000620465 MYT1LQ9UL68 1186 aa7.33□□□□□ -1.24
MALAT1-216ENST00000620465 NYAP1Q6ZVC0 841 aa7.32□□□□□ -1.24
MALAT1-216ENST00000620465 GUCA2AQ02747 115 aa7.31□□□□□ -1.24
MALAT1-216ENST00000620465 CSPP1Q1MSJ5 1256 aa7.31□□□□□ -1.24
MALAT1-216ENST00000620465 PRPF38BQ5VTL8 546 aaKnown RBP7.31□□□□□ -1.24
MALAT1-216ENST00000620465 HLA-CQ95604 372 aa7.31□□□□□ -1.24
MALAT1-216ENST00000620465 QPCTQ16769 361 aa7.3□□□□□ -1.24
MALAT1-216ENST00000620465 MORN1Q5T089 497 aa7.3□□□□□ -1.24
MALAT1-216ENST00000620465 ZBTB3Q9H5J0 574 aa7.3□□□□□ -1.24
MALAT1-216ENST00000620465 PCDHB3Q9Y5E6 796 aa7.3□□□□□ -1.24
MALAT1-216ENST00000620465 PCDHB15Q9Y5E8 787 aa7.3□□□□□ -1.24
MALAT1-216ENST00000620465 LILRB3O75022 631 aa7.29□□□□□ -1.24
MALAT1-216ENST00000620465 Q3C1V9 767 aa7.29□□□□□ -1.24
MALAT1-216ENST00000620465 PUS10Q3MIT2 529 aaKnown RBP7.29□□□□□ -1.24
MALAT1-216ENST00000620465 PPP2R2DQ66LE6 453 aa7.29□□□□□ -1.24
MALAT1-216ENST00000620465 ERICH6Q7L0X2 663 aa7.29□□□□□ -1.24
MALAT1-216ENST00000620465 PCDHGC3Q9UN70 934 aa7.29□□□□□ -1.24
MALAT1-216ENST00000620465 NUTM2BA6NNL0 878 aaPredicted RBP7.28□□□□□ -1.24
MALAT1-216ENST00000620465 NUTM2EB1AL46 878 aaPredicted RBP7.28□□□□□ -1.24
MALAT1-216ENST00000620465 NR1I2O75469 434 aa7.28□□□□□ -1.24
MALAT1-216ENST00000620465 MTMR2Q13614 643 aa7.28□□□□□ -1.24
MALAT1-216ENST00000620465 NUTM2DQ5VT03 806 aaPredicted RBP7.28□□□□□ -1.24
MALAT1-216ENST00000620465 NUTM2AQ8IVF1 878 aaPredicted RBP7.28□□□□□ -1.24
MALAT1-216ENST00000620465 CABLES1Q8TDN4 633 aa7.28□□□□□ -1.24
MALAT1-216ENST00000620465 SPDYE5A6NIY4 337 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms