RNA–Protein interactions for RNA: ENST00000620410.1

PTPRT-212, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

TSL 5 BASIC

Gene PTPRT, Length 940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-212ENST00000620410 COL16A1Q07092 1604 aaPredicted RBP17.7■□□□□ 0.42
PTPRT-212ENST00000620410 FAM50AQ14320 339 aaKnown RBP17.7■□□□□ 0.42
PTPRT-212ENST00000620410 ADGRB3O60242 1522 aa17.7■□□□□ 0.42
PTPRT-212ENST00000620410 IDI1Q13907 227 aa17.69■□□□□ 0.42
PTPRT-212ENST00000620410 LMTK2Q8IWU2 1503 aa17.67■□□□□ 0.42
PTPRT-212ENST00000620410 LRP6O75581 1613 aa17.67■□□□□ 0.42
PTPRT-212ENST00000620410 ADGRL2O95490 1459 aa17.67■□□□□ 0.42
PTPRT-212ENST00000620410 UPF1Q92900 1129 aaKnown RBP eCLIP17.66■□□□□ 0.42
PTPRT-212ENST00000620410 BCANQ96GW7 911 aa17.66■□□□□ 0.42
PTPRT-212ENST00000620410 MEX3CQ5U5Q3 659 aaKnown RBP17.65■□□□□ 0.42
PTPRT-212ENST00000620410 ZNF772Q68DY9 489 aaPredicted RBP17.65■□□□□ 0.42
PTPRT-212ENST00000620410 PPARGC1BQ86YN6 1023 aaKnown RBP17.65■□□□□ 0.42
PTPRT-212ENST00000620410 SPATA31A6Q5VVP1 1343 aa17.65■□□□□ 0.42
PTPRT-212ENST00000620410 CHD2O14647 1828 aaKnown RBP17.65■□□□□ 0.42
PTPRT-212ENST00000620410 NOS1P29475 1434 aa17.64■□□□□ 0.41
PTPRT-212ENST00000620410 TRIM52Q96A61 297 aa17.63■□□□□ 0.41
PTPRT-212ENST00000620410 SHPRHQ149N8 1683 aa17.63■□□□□ 0.41
PTPRT-212ENST00000620410 AHDC1Q5TGY3 1603 aaPredicted RBP17.61■□□□□ 0.41
PTPRT-212ENST00000620410 SLC52A1Q9NWF4 448 aa17.6■□□□□ 0.41
PTPRT-212ENST00000620410 PLEKHG1Q9ULL1 1385 aa17.6■□□□□ 0.41
PTPRT-212ENST00000620410 MYO5BQ9ULV0 1848 aa17.59■□□□□ 0.41
PTPRT-212ENST00000620410 ZFYVE9O95405 1425 aa17.59■□□□□ 0.41
PTPRT-212ENST00000620410 ANKRD50Q9ULJ7 1429 aa17.59■□□□□ 0.41
PTPRT-212ENST00000620410 NCOA3Q9Y6Q9 1424 aa17.59■□□□□ 0.41
PTPRT-212ENST00000620410 C14orf37Q86TY3 774 aa17.58■□□□□ 0.4
PTPRT-212ENST00000620410 PPP1R15AO75807 674 aaPredicted RBP17.57■□□□□ 0.4
PTPRT-212ENST00000620410 RXRBP28702 533 aa17.57■□□□□ 0.4
PTPRT-212ENST00000620410 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.57■□□□□ 0.4
PTPRT-212ENST00000620410 GCC2Q8IWJ2 1684 aa17.57■□□□□ 0.4
PTPRT-212ENST00000620410 SRCAPQ6ZRS2 3230 aa17.57■□□□□ 0.4
PTPRT-212ENST00000620410 CDK12Q9NYV4 1490 aaPredicted RBP17.56■□□□□ 0.4
PTPRT-212ENST00000620410 RPRD2Q5VT52 1461 aaKnown RBP17.56■□□□□ 0.4
PTPRT-212ENST00000620410 RIMS2Q9UQ26 1411 aa17.55■□□□□ 0.4
PTPRT-212ENST00000620410 CADPS2Q86UW7 1296 aa17.55■□□□□ 0.4
PTPRT-212ENST00000620410 HDGFP51858 240 aaKnown RBP17.54■□□□□ 0.4
PTPRT-212ENST00000620410 TMEM131LA2VDJ0 1609 aa17.54■□□□□ 0.4
PTPRT-212ENST00000620410 ATF3P18847 181 aa17.53■□□□□ 0.4
PTPRT-212ENST00000620410 TBX22Q9Y458 520 aa17.53■□□□□ 0.4
PTPRT-212ENST00000620410 DIP2AQ14689 1571 aa17.53■□□□□ 0.4
PTPRT-212ENST00000620410 ITGAEP38570 1179 aa17.52■□□□□ 0.4
PTPRT-212ENST00000620410 ROCK1Q13464 1354 aa17.52■□□□□ 0.39
PTPRT-212ENST00000620410 C19orf44Q9H6X5 657 aa17.51■□□□□ 0.39
PTPRT-212ENST00000620410 NUTM2BA6NNL0 878 aaPredicted RBP17.5■□□□□ 0.39
PTPRT-212ENST00000620410 NUTM2EB1AL46 878 aaPredicted RBP17.5■□□□□ 0.39
PTPRT-212ENST00000620410 NUTM2AQ8IVF1 878 aaPredicted RBP17.5■□□□□ 0.39
PTPRT-212ENST00000620410 ADAMTS13Q76LX8 1427 aa17.49■□□□□ 0.39
PTPRT-212ENST00000620410 PIK3R4Q99570 1358 aa17.49■□□□□ 0.39
PTPRT-212ENST00000620410 UNC13BO14795 1591 aa17.49■□□□□ 0.39
PTPRT-212ENST00000620410 AFF2P51816 1311 aa17.48■□□□□ 0.39
PTPRT-212ENST00000620410 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.48■□□□□ 0.39
PTPRT-212ENST00000620410 BRINP3Q76B58 766 aa17.47■□□□□ 0.39
PTPRT-212ENST00000620410 TRPM2O94759 1503 aa17.46■□□□□ 0.39
PTPRT-212ENST00000620410 ASXL1Q8IXJ9 1541 aa17.46■□□□□ 0.39
PTPRT-212ENST00000620410 RGS12O14924 1447 aa17.46■□□□□ 0.39
PTPRT-212ENST00000620410 DCCP43146 1447 aa17.45■□□□□ 0.38
PTPRT-212ENST00000620410 NHSL1Q5SYE7 1610 aa17.44■□□□□ 0.38
PTPRT-212ENST00000620410 CHGAP10645 457 aaKnown RBP17.44■□□□□ 0.38
PTPRT-212ENST00000620410 E9PCH4 1651 aa17.44■□□□□ 0.38
PTPRT-212ENST00000620410 SETD5Q9C0A6 1442 aa17.44■□□□□ 0.38
PTPRT-212ENST00000620410 NUP155O75694 1391 aa17.42■□□□□ 0.38
PTPRT-212ENST00000620410 NUTM2DQ5VT03 806 aaPredicted RBP17.42■□□□□ 0.38
PTPRT-212ENST00000620410 IQGAP3Q86VI3 1631 aa17.42■□□□□ 0.38
PTPRT-212ENST00000620410 RBM6P78332 1123 aaKnown RBP17.41■□□□□ 0.38
PTPRT-212ENST00000620410 AMOTL2Q9Y2J4 779 aa17.41■□□□□ 0.38
PTPRT-212ENST00000620410 C8orf37Q96NL8 207 aa17.4■□□□□ 0.38
PTPRT-212ENST00000620410 MST1RQ04912 1400 aa17.39■□□□□ 0.38
PTPRT-212ENST00000620410 PTPRUQ92729 1446 aa17.39■□□□□ 0.38
PTPRT-212ENST00000620410 RRBP1Q9P2E9 1410 aaKnown RBP17.39■□□□□ 0.38
PTPRT-212ENST00000620410 XRN1Q8IZH2 1706 aaKnown RBP17.39■□□□□ 0.37
PTPRT-212ENST00000620410 LRRC59Q96AG4 307 aaKnown RBP17.39■□□□□ 0.37
PTPRT-212ENST00000620410 QTRT2Q9H974 415 aaKnown RBP17.39■□□□□ 0.37
PTPRT-212ENST00000620410 PNPLA6Q8IY17 1366 aa17.37■□□□□ 0.37
PTPRT-212ENST00000620410 ATAD2Q6PL18 1390 aa17.36■□□□□ 0.37
PTPRT-212ENST00000620410 NRXN3Q9Y4C0 1643 aa17.35■□□□□ 0.37
PTPRT-212ENST00000620410 NAIPQ13075 1403 aa17.34■□□□□ 0.37
PTPRT-212ENST00000620410 NGLY1Q96IV0 654 aa17.34■□□□□ 0.37
PTPRT-212ENST00000620410 SETBP1Q9Y6X0 1596 aa17.33■□□□□ 0.37
PTPRT-212ENST00000620410 EP400Q96L91 3159 aa17.32■□□□□ 0.36
PTPRT-212ENST00000620410 FOXD1Q16676 465 aa17.32■□□□□ 0.36
PTPRT-212ENST00000620410 ADGRL3Q9HAR2 1447 aa17.31■□□□□ 0.36
PTPRT-212ENST00000620410 NALCNQ8IZF0 1738 aa17.31■□□□□ 0.36
PTPRT-212ENST00000620410 DDX17Q92841 729 aaKnown RBP17.31■□□□□ 0.36
PTPRT-212ENST00000620410 ADAMTS2O95450 1211 aa17.3■□□□□ 0.36
PTPRT-212ENST00000620410 ZRANB1Q9UGI0 708 aa17.3■□□□□ 0.36
PTPRT-212ENST00000620410 LAMC1P11047 1609 aa17.28■□□□□ 0.36
PTPRT-212ENST00000620410 METP08581 1390 aa17.27■□□□□ 0.35
PTPRT-212ENST00000620410 USP21Q9UK80 565 aa17.26■□□□□ 0.35
PTPRT-212ENST00000620410 TRPC5Q9UL62 973 aaPredicted RBP17.26■□□□□ 0.35
PTPRT-212ENST00000620410 SPHKAPQ2M3C7 1700 aa17.26■□□□□ 0.35
PTPRT-212ENST00000620410 C1orf167Q5SNV9 1468 aa17.24■□□□□ 0.35
PTPRT-212ENST00000620410 PTCH1Q13635 1447 aa17.24■□□□□ 0.35
PTPRT-212ENST00000620410 HFM1A2PYH4 1435 aa17.23■□□□□ 0.35
PTPRT-212ENST00000620410 ATRNO75882 1429 aa17.23■□□□□ 0.35
PTPRT-212ENST00000620410 CLTCL1P53675 1640 aa17.22■□□□□ 0.35
PTPRT-212ENST00000620410 ZNF326Q5BKZ1 582 aaKnown RBP17.22■□□□□ 0.35
PTPRT-212ENST00000620410 SOS2Q07890 1332 aaPredicted RBP17.21■□□□□ 0.35
PTPRT-212ENST00000620410 COL22A1Q8NFW1 1626 aaPredicted RBP17.21■□□□□ 0.35
PTPRT-212ENST00000620410 FNBP4Q8N3X1 1017 aaPredicted RBP17.21■□□□□ 0.35
PTPRT-212ENST00000620410 CCDC125Q86Z20 511 aa17.2■□□□□ 0.34
PTPRT-212ENST00000620410 NEXMIFQ5QGS0 1516 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms