RNA–Protein interactions for RNA: ENST00000619747.1

LAPTM4B-204, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 2,758 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-204ENST00000619747 FANCIQ9NVI1 1328 aa26.09■■□□□ 1.77
LAPTM4B-204ENST00000619747 CCDC136Q96JN2 1154 aa26.09■■□□□ 1.77
LAPTM4B-204ENST00000619747 HECW2Q9P2P5 1572 aa26.09■■□□□ 1.77
LAPTM4B-204ENST00000619747 CFAP74Q9C0B2 1584 aa26.06■■□□□ 1.76
LAPTM4B-204ENST00000619747 ABCA6Q8N139 1617 aa26.06■■□□□ 1.76
LAPTM4B-204ENST00000619747 YEATS2Q9ULM3 1422 aa26.06■■□□□ 1.76
LAPTM4B-204ENST00000619747 STAC3Q96MF2 364 aa26.05■■□□□ 1.76
LAPTM4B-204ENST00000619747 LAMC1P11047 1609 aa26.04■■□□□ 1.76
LAPTM4B-204ENST00000619747 NEO1Q92859 1461 aa26.04■■□□□ 1.76
LAPTM4B-204ENST00000619747 RNF17Q9BXT8 1623 aaKnown RBP26.04■■□□□ 1.76
LAPTM4B-204ENST00000619747 SCAF11Q99590 1463 aaKnown RBP26.03■■□□□ 1.76
LAPTM4B-204ENST00000619747 TMEM132EQ6IEE7 984 aa26.03■■□□□ 1.76
LAPTM4B-204ENST00000619747 NOS1P29475 1434 aa26.03■■□□□ 1.76
LAPTM4B-204ENST00000619747 NLRP13Q86W25 1043 aa26.03■■□□□ 1.76
LAPTM4B-204ENST00000619747 TRAK1Q9UPV9 953 aa26.01■■□□□ 1.75
LAPTM4B-204ENST00000619747 BRD4O60885 1362 aaPredicted RBP26.01■■□□□ 1.75
LAPTM4B-204ENST00000619747 PARD3Q8TEW0 1356 aa26■■□□□ 1.75
LAPTM4B-204ENST00000619747 KNSTRNQ9Y448 316 aa26■■□□□ 1.75
LAPTM4B-204ENST00000619747 KIF1BO60333 1816 aa25.99■■□□□ 1.75
LAPTM4B-204ENST00000619747 RIMBP3CA6NJZ7 1639 aa25.98■■□□□ 1.75
LAPTM4B-204ENST00000619747 RIMBP3BA6NNM3 1639 aa25.98■■□□□ 1.75
LAPTM4B-204ENST00000619747 RIMBP3Q9UFD9 1639 aa25.98■■□□□ 1.75
LAPTM4B-204ENST00000619747 MROH2AA6NES4 1674 aa25.97■■□□□ 1.75
LAPTM4B-204ENST00000619747 LMTK2Q8IWU2 1503 aa25.96■■□□□ 1.75
LAPTM4B-204ENST00000619747 ABCC3O15438 1527 aa25.94■■□□□ 1.74
LAPTM4B-204ENST00000619747 IQGAP1P46940 1657 aa25.94■■□□□ 1.74
LAPTM4B-204ENST00000619747 TSPOAP1O95153 1857 aa25.94■■□□□ 1.74
LAPTM4B-204ENST00000619747 EIF3AQ14152 1382 aaKnown RBP25.94■■□□□ 1.74
LAPTM4B-204ENST00000619747 IDI1Q13907 227 aa25.94■■□□□ 1.74
LAPTM4B-204ENST00000619747 CDCA8Q53HL2 280 aa25.94■■□□□ 1.74
LAPTM4B-204ENST00000619747 MAP3K4Q9Y6R4 1608 aa25.93■■□□□ 1.74
LAPTM4B-204ENST00000619747 DIP2CQ9Y2E4 1556 aa25.93■■□□□ 1.74
LAPTM4B-204ENST00000619747 MLECQ14165 292 aa25.91■■□□□ 1.74
LAPTM4B-204ENST00000619747 FBXO31Q5XUX0 539 aaPredicted RBP25.91■■□□□ 1.74
LAPTM4B-204ENST00000619747 LRPPRCP42704 1394 aaKnown RBP25.9■■□□□ 1.74
LAPTM4B-204ENST00000619747 MYOM2P54296 1465 aa25.88■■□□□ 1.73
LAPTM4B-204ENST00000619747 NUDCQ9Y266 331 aa25.88■■□□□ 1.73
LAPTM4B-204ENST00000619747 RICTORQ6R327 1708 aa25.88■■□□□ 1.73
LAPTM4B-204ENST00000619747 SAFB2Q14151 953 aaKnown RBP eCLIP25.87■■□□□ 1.73
LAPTM4B-204ENST00000619747 AMER1Q5JTC6 1135 aaPredicted RBP25.87■■□□□ 1.73
LAPTM4B-204ENST00000619747 C14orf93Q9H972 538 aaKnown RBP25.86■■□□□ 1.73
LAPTM4B-204ENST00000619747 ADGRB3O60242 1522 aa25.86■■□□□ 1.73
LAPTM4B-204ENST00000619747 NBR1Q14596 966 aa25.85■■□□□ 1.73
LAPTM4B-204ENST00000619747 CENPJQ9HC77 1338 aaPredicted RBP25.85■■□□□ 1.73
LAPTM4B-204ENST00000619747 SIGLEC1Q9BZZ2 1709 aa25.84■■□□□ 1.73
LAPTM4B-204ENST00000619747 PPP2R1AP30153 589 aa25.83■■□□□ 1.72
LAPTM4B-204ENST00000619747 ERICH6BQ5W0A0 696 aa25.83■■□□□ 1.72
LAPTM4B-204ENST00000619747 UBE2Q2Q8WVN8 375 aa25.83■■□□□ 1.72
LAPTM4B-204ENST00000619747 STK26Q9P289 416 aa25.83■■□□□ 1.72
LAPTM4B-204ENST00000619747 CAMSAP1Q5T5Y3 1602 aa25.82■■□□□ 1.72
LAPTM4B-204ENST00000619747 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.82■■□□□ 1.72
LAPTM4B-204ENST00000619747 SMG6Q86US8 1419 aaKnown RBP25.81■■□□□ 1.72
LAPTM4B-204ENST00000619747 B4GALNT3Q6L9W6 998 aa25.81■■□□□ 1.72
LAPTM4B-204ENST00000619747 VGFO15240 615 aaPredicted RBP25.8■■□□□ 1.72
LAPTM4B-204ENST00000619747 CARD14Q9BXL6 1004 aa25.8■■□□□ 1.72
LAPTM4B-204ENST00000619747 ADAMTS8Q9UP79 889 aa25.8■■□□□ 1.72
LAPTM4B-204ENST00000619747 ERVK-7P63135 1459 aa25.8■■□□□ 1.72
LAPTM4B-204ENST00000619747 NEURL4Q96JN8 1562 aa25.79■■□□□ 1.72
LAPTM4B-204ENST00000619747 CDCA7LQ96GN5 454 aa25.79■■□□□ 1.72
LAPTM4B-204ENST00000619747 IFT172Q9UG01 1749 aa25.79■■□□□ 1.72
LAPTM4B-204ENST00000619747 PIK3C2GO75747 1445 aa25.79■■□□□ 1.72
LAPTM4B-204ENST00000619747 SLC12A5Q9H2X9 1139 aa25.78■■□□□ 1.72
LAPTM4B-204ENST00000619747 NRXN1Q9ULB1 1477 aa25.78■■□□□ 1.72
LAPTM4B-204ENST00000619747 DIP2BQ9P265 1576 aa25.78■■□□□ 1.72
LAPTM4B-204ENST00000619747 KIAA1210Q9ULL0 1709 aa25.78■■□□□ 1.72
LAPTM4B-204ENST00000619747 SYNMO15061 1565 aa25.77■■□□□ 1.72
LAPTM4B-204ENST00000619747 RPGRIP1LQ68CZ1 1315 aa25.77■■□□□ 1.72
LAPTM4B-204ENST00000619747 RTN4Q9NQC3 1192 aaKnown RBP25.77■■□□□ 1.72
LAPTM4B-204ENST00000619747 STAG3Q9UJ98 1225 aa25.77■■□□□ 1.72
LAPTM4B-204ENST00000619747 GLI2P10070 1586 aa25.76■■□□□ 1.71
LAPTM4B-204ENST00000619747 TNNT2P45379 298 aaPredicted RBP25.75■■□□□ 1.71
LAPTM4B-204ENST00000619747 IL27Q8NEV9 243 aa25.75■■□□□ 1.71
LAPTM4B-204ENST00000619747 SLC52A1Q9NWF4 448 aa25.74■■□□□ 1.71
LAPTM4B-204ENST00000619747 PPP4R2Q9NY27 417 aa25.74■■□□□ 1.71
LAPTM4B-204ENST00000619747 PPLO60437 1756 aa25.73■■□□□ 1.71
LAPTM4B-204ENST00000619747 WDR43Q15061 677 aaKnown RBP eCLIP25.73■■□□□ 1.71
LAPTM4B-204ENST00000619747 KDM5AP29375 1690 aaKnown RBP25.71■■□□□ 1.71
LAPTM4B-204ENST00000619747 ASXL1Q8IXJ9 1541 aa25.7■■□□□ 1.7
LAPTM4B-204ENST00000619747 MYOM1P52179 1685 aa25.7■■□□□ 1.7
LAPTM4B-204ENST00000619747 SLC24A1O60721 1099 aa25.69■■□□□ 1.7
LAPTM4B-204ENST00000619747 ARHGAP31Q2M1Z3 1444 aa25.69■■□□□ 1.7
LAPTM4B-204ENST00000619747 CCDC146Q8IYE0 955 aa25.67■■□□□ 1.7
LAPTM4B-204ENST00000619747 CABP2Q9NPB3 220 aa25.67■■□□□ 1.7
LAPTM4B-204ENST00000619747 ADGRB1O14514 1584 aa25.67■■□□□ 1.7
LAPTM4B-204ENST00000619747 NEXMIFQ5QGS0 1516 aa25.65■■□□□ 1.7
LAPTM4B-204ENST00000619747 PIK3C2BO00750 1634 aa25.64■■□□□ 1.69
LAPTM4B-204ENST00000619747 MYO5BQ9ULV0 1848 aa25.62■■□□□ 1.69
LAPTM4B-204ENST00000619747 SETBP1Q9Y6X0 1596 aa25.62■■□□□ 1.69
LAPTM4B-204ENST00000619747 RCAN3Q9UKA8 241 aa25.62■■□□□ 1.69
LAPTM4B-204ENST00000619747 SBNO2Q9Y2G9 1366 aa25.62■■□□□ 1.69
LAPTM4B-204ENST00000619747 MINK1Q8N4C8 1332 aaPredicted RBP25.61■■□□□ 1.69
LAPTM4B-204ENST00000619747 PAK3O75914 559 aaPredicted RBP25.6■■□□□ 1.69
LAPTM4B-204ENST00000619747 NSD3Q9BZ95 1437 aa25.6■■□□□ 1.69
LAPTM4B-204ENST00000619747 NOP58Q9Y2X3 529 aaKnown RBP25.6■■□□□ 1.69
LAPTM4B-204ENST00000619747 ZMYM4Q5VZL5 1548 aa25.6■■□□□ 1.69
LAPTM4B-204ENST00000619747 SRPK2P78362 688 aaKnown RBP25.59■■□□□ 1.69
LAPTM4B-204ENST00000619747 MORC1Q86VD1 984 aa25.59■■□□□ 1.69
LAPTM4B-204ENST00000619747 PREX1Q8TCU6 1659 aa25.58■■□□□ 1.69
LAPTM4B-204ENST00000619747 ESF1Q9H501 851 aaKnown RBP25.58■■□□□ 1.69
LAPTM4B-204ENST00000619747 EVC2Q86UK5 1308 aa25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms