RNA–Protein interactions for RNA: ENST00000619707.4

C9orf72-206, Transcript of chromosome 9 open reading frame 72, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf72, Length 3,339 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-206ENST00000619707 AMER1Q5JTC6 1135 aaPredicted RBP11.21□□□□□ -0.61
C9orf72-206ENST00000619707 ABCC10Q5T3U5 1492 aa11.21□□□□□ -0.61
C9orf72-206ENST00000619707 MRC2Q9UBG0 1479 aa11.21□□□□□ -0.62
C9orf72-206ENST00000619707 MAGI1Q96QZ7 1491 aaPredicted RBP11.2□□□□□ -0.62
C9orf72-206ENST00000619707 TAOK2Q9UL54 1235 aa11.2□□□□□ -0.62
C9orf72-206ENST00000619707 IFT140Q96RY7 1462 aa11.2□□□□□ -0.62
C9orf72-206ENST00000619707 ARHGEF5Q12774 1597 aa11.2□□□□□ -0.62
C9orf72-206ENST00000619707 CARMIL2Q6F5E8 1435 aa11.2□□□□□ -0.62
C9orf72-206ENST00000619707 POGKQ9P215 609 aa11.19□□□□□ -0.62
C9orf72-206ENST00000619707 CLASP1Q7Z460 1538 aa11.19□□□□□ -0.62
C9orf72-206ENST00000619707 L1TD1Q5T7N2 865 aaKnown RBP11.19□□□□□ -0.62
C9orf72-206ENST00000619707 VIRMAQ69YN4 1812 aaKnown RBP11.18□□□□□ -0.62
C9orf72-206ENST00000619707 NKTRP30414 1462 aaKnown RBP11.18□□□□□ -0.62
C9orf72-206ENST00000619707 KCNA4P22459 653 aa11.18□□□□□ -0.62
C9orf72-206ENST00000619707 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.18□□□□□ -0.62
C9orf72-206ENST00000619707 NUP160Q12769 1436 aa11.18□□□□□ -0.62
C9orf72-206ENST00000619707 MAPK8IP3Q9UPT6 1336 aa11.18□□□□□ -0.62
C9orf72-206ENST00000619707 CCDC141Q6ZP82 1450 aa11.18□□□□□ -0.62
C9orf72-206ENST00000619707 TPRNQ4KMQ1 711 aa11.17□□□□□ -0.62
C9orf72-206ENST00000619707 SLKQ9H2G2 1235 aaPredicted RBP11.17□□□□□ -0.62
C9orf72-206ENST00000619707 PLA2R1Q13018 1463 aa11.17□□□□□ -0.62
C9orf72-206ENST00000619707 MAGI2Q86UL8 1455 aa11.17□□□□□ -0.62
C9orf72-206ENST00000619707 USP19O94966 1318 aa11.17□□□□□ -0.62
C9orf72-206ENST00000619707 MYO5CQ9NQX4 1742 aa11.17□□□□□ -0.62
C9orf72-206ENST00000619707 BCAR3O75815 825 aa11.17□□□□□ -0.62
C9orf72-206ENST00000619707 CCDC146Q8IYE0 955 aa11.17□□□□□ -0.62
C9orf72-206ENST00000619707 WDR7Q9Y4E6 1490 aa11.17□□□□□ -0.62
C9orf72-206ENST00000619707 TRMT2AQ8IZ69 625 aaKnown RBP11.17□□□□□ -0.62
C9orf72-206ENST00000619707 CGNL1Q0VF96 1302 aa11.17□□□□□ -0.62
C9orf72-206ENST00000619707 IGHDP01880 384 aa11.16□□□□□ -0.62
C9orf72-206ENST00000619707 DNAJC5BQ9UF47 199 aa11.16□□□□□ -0.62
C9orf72-206ENST00000619707 SYNJ2O15056 1496 aa11.16□□□□□ -0.62
C9orf72-206ENST00000619707 E9PSI1 815 aa11.15□□□□□ -0.62
C9orf72-206ENST00000619707 CANXP27824 592 aaKnown RBP11.15□□□□□ -0.62
C9orf72-206ENST00000619707 CDCA8Q53HL2 280 aa11.15□□□□□ -0.62
C9orf72-206ENST00000619707 PIK3C2GO75747 1445 aa11.15□□□□□ -0.62
C9orf72-206ENST00000619707 APAF1O14727 1248 aa11.15□□□□□ -0.62
C9orf72-206ENST00000619707 CHMP7Q8WUX9 453 aaPredicted RBP11.15□□□□□ -0.62
C9orf72-206ENST00000619707 UPF2Q9HAU5 1272 aaKnown RBP11.15□□□□□ -0.62
C9orf72-206ENST00000619707 ATP10BO94823 1461 aa11.15□□□□□ -0.62
C9orf72-206ENST00000619707 ABCA8O94911 1581 aa11.15□□□□□ -0.62
C9orf72-206ENST00000619707 RSPH4AQ5TD94 716 aa11.15□□□□□ -0.62
C9orf72-206ENST00000619707 SEC24BO95487 1268 aa11.14□□□□□ -0.63
C9orf72-206ENST00000619707 FGD1P98174 961 aa11.14□□□□□ -0.63
C9orf72-206ENST00000619707 SPINK5Q9NQ38 1064 aaPredicted RBP11.14□□□□□ -0.63
C9orf72-206ENST00000619707 PDE3AQ14432 1141 aa11.14□□□□□ -0.63
C9orf72-206ENST00000619707 CLUAP1Q96AJ1 413 aa11.14□□□□□ -0.63
C9orf72-206ENST00000619707 UNC13BO14795 1591 aa11.14□□□□□ -0.63
C9orf72-206ENST00000619707 ASXL1Q8IXJ9 1541 aa11.14□□□□□ -0.63
C9orf72-206ENST00000619707 NINLQ9Y2I6 1382 aa11.13□□□□□ -0.63
C9orf72-206ENST00000619707 RNF17Q9BXT8 1623 aaKnown RBP11.13□□□□□ -0.63
C9orf72-206ENST00000619707 JPH4Q96JJ6 628 aa11.13□□□□□ -0.63
C9orf72-206ENST00000619707 ABCC2Q92887 1545 aa11.13□□□□□ -0.63
C9orf72-206ENST00000619707 SYNMO15061 1565 aa11.13□□□□□ -0.63
C9orf72-206ENST00000619707 RRAGDQ9NQL2 400 aaPredicted RBP11.12□□□□□ -0.63
C9orf72-206ENST00000619707 SAMD9LQ8IVG5 1584 aa11.12□□□□□ -0.63
C9orf72-206ENST00000619707 CENPJQ9HC77 1338 aaPredicted RBP11.12□□□□□ -0.63
C9orf72-206ENST00000619707 FBLN2P98095 1184 aa11.12□□□□□ -0.63
C9orf72-206ENST00000619707 COG6Q9Y2V7 657 aa11.12□□□□□ -0.63
C9orf72-206ENST00000619707 NGEFQ8N5V2 710 aa11.11□□□□□ -0.63
C9orf72-206ENST00000619707 ANTXR1Q9H6X2 564 aa11.11□□□□□ -0.63
C9orf72-206ENST00000619707 IQGAP3Q86VI3 1631 aa11.11□□□□□ -0.63
C9orf72-206ENST00000619707 PANK1Q8TE04 598 aa11.11□□□□□ -0.63
C9orf72-206ENST00000619707 NLRP1Q9C000 1473 aa11.1□□□□□ -0.63
C9orf72-206ENST00000619707 NPC1L1Q9UHC9 1359 aa11.1□□□□□ -0.63
C9orf72-206ENST00000619707 GOLGA6L3A6NEY3 463 aa11.1□□□□□ -0.63
C9orf72-206ENST00000619707 PMFBP1Q8TBY8 1022 aa11.1□□□□□ -0.63
C9orf72-206ENST00000619707 ATP10AO60312 1499 aa11.09□□□□□ -0.63
C9orf72-206ENST00000619707 PREX2Q70Z35 1606 aa11.09□□□□□ -0.63
C9orf72-206ENST00000619707 TAF7LQ5H9L4 462 aa11.09□□□□□ -0.63
C9orf72-206ENST00000619707 TBC1D32Q96NH3 1257 aa11.09□□□□□ -0.63
C9orf72-206ENST00000619707 PAXIP1Q6ZW49 1069 aaPredicted RBP11.09□□□□□ -0.63
C9orf72-206ENST00000619707 CDC42BPBQ9Y5S2 1711 aa11.08□□□□□ -0.63
C9orf72-206ENST00000619707 SYCP2Q9BX26 1530 aa11.08□□□□□ -0.64
C9orf72-206ENST00000619707 IQGAP1P46940 1657 aa11.08□□□□□ -0.64
C9orf72-206ENST00000619707 TBC1D2Q9BYX2 928 aa11.08□□□□□ -0.64
C9orf72-206ENST00000619707 DMRT2Q9Y5R5 561 aa11.08□□□□□ -0.64
C9orf72-206ENST00000619707 PLXNC1O60486 1568 aa11.07□□□□□ -0.64
C9orf72-206ENST00000619707 MAST1Q9Y2H9 1570 aa11.07□□□□□ -0.64
C9orf72-206ENST00000619707 SCAF11Q99590 1463 aaKnown RBP11.07□□□□□ -0.64
C9orf72-206ENST00000619707 AAMPQ13685 434 aa11.07□□□□□ -0.64
C9orf72-206ENST00000619707 XRCC6P12956 609 aaKnown RBP eCLIP11.07□□□□□ -0.64
C9orf72-206ENST00000619707 GLIPR1L2Q4G1C9 344 aa11.07□□□□□ -0.64
C9orf72-206ENST00000619707 PNNQ9H307 717 aaKnown RBP11.07□□□□□ -0.64
C9orf72-206ENST00000619707 ZMYM3Q14202 1370 aa11.07□□□□□ -0.64
C9orf72-206ENST00000619707 MADDQ8WXG6 1647 aa11.06□□□□□ -0.64
C9orf72-206ENST00000619707 NAP1L5Q96NT1 182 aaPredicted RBP11.06□□□□□ -0.64
C9orf72-206ENST00000619707 MCM4P33991 863 aa11.06□□□□□ -0.64
C9orf72-206ENST00000619707 GZF1Q9H116 711 aaPredicted RBP11.06□□□□□ -0.64
C9orf72-206ENST00000619707 WWC1Q8IX03 1113 aa11.05□□□□□ -0.64
C9orf72-206ENST00000619707 SPRYD3Q8NCJ5 442 aa11.05□□□□□ -0.64
C9orf72-206ENST00000619707 ARHGAP5Q13017 1502 aa11.05□□□□□ -0.64
C9orf72-206ENST00000619707 MYOM1P52179 1685 aa11.05□□□□□ -0.64
C9orf72-206ENST00000619707 FSD2A1L4K1 749 aa11.05□□□□□ -0.64
C9orf72-206ENST00000619707 PDZRN3Q9UPQ7 1066 aa11.05□□□□□ -0.64
C9orf72-206ENST00000619707 DUOX2Q9NRD8 1548 aa11.04□□□□□ -0.64
C9orf72-206ENST00000619707 CLCN1P35523 988 aa11.04□□□□□ -0.64
C9orf72-206ENST00000619707 RWDD1Q9H446 243 aaPredicted RBP11.04□□□□□ -0.64
C9orf72-206ENST00000619707 PCDHB15Q9Y5E8 787 aa11.04□□□□□ -0.64
C9orf72-206ENST00000619707 KDM5AP29375 1690 aaKnown RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms