RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 RBM33Q96EV2 1170 aaKnown RBP17.13■□□□□ 0.33
TARDBP-221ENST00000619555 UNC13BO14795 1591 aa17.13■□□□□ 0.33
TARDBP-221ENST00000619555 TMEM94Q12767 1356 aa17.13■□□□□ 0.33
TARDBP-221ENST00000619555 PROSER2Q86WR7 435 aaPredicted RBP17.12■□□□□ 0.33
TARDBP-221ENST00000619555 GCC2Q8IWJ2 1684 aa17.11■□□□□ 0.33
TARDBP-221ENST00000619555 CHGAP10645 457 aaKnown RBP17.11■□□□□ 0.33
TARDBP-221ENST00000619555 ZFYVE9O95405 1425 aa17.1■□□□□ 0.33
TARDBP-221ENST00000619555 RIMS2Q9UQ26 1411 aa17.1■□□□□ 0.33
TARDBP-221ENST00000619555 TMEM131LA2VDJ0 1609 aa17.09■□□□□ 0.33
TARDBP-221ENST00000619555 E9PCH4 1651 aa17.09■□□□□ 0.33
TARDBP-221ENST00000619555 NUP155O75694 1391 aa17.08■□□□□ 0.32
TARDBP-221ENST00000619555 PPP1R15AO75807 674 aaPredicted RBP17.08■□□□□ 0.32
TARDBP-221ENST00000619555 NUTM2DQ5VT03 806 aaPredicted RBP17.08■□□□□ 0.32
TARDBP-221ENST00000619555 PLEKHG1Q9ULL1 1385 aa17.07■□□□□ 0.32
TARDBP-221ENST00000619555 HDGFP51858 240 aaKnown RBP17.07■□□□□ 0.32
TARDBP-221ENST00000619555 IQGAP3Q86VI3 1631 aa17.07■□□□□ 0.32
TARDBP-221ENST00000619555 FAM135BQ49AJ0 1406 aa17.05■□□□□ 0.32
TARDBP-221ENST00000619555 NWD1Q149M9 1564 aa17.05■□□□□ 0.32
TARDBP-221ENST00000619555 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.04■□□□□ 0.32
TARDBP-221ENST00000619555 NKTRP30414 1462 aaKnown RBP17.04■□□□□ 0.32
TARDBP-221ENST00000619555 TBX22Q9Y458 520 aa17.03■□□□□ 0.32
TARDBP-221ENST00000619555 CHD2O14647 1828 aaKnown RBP17.03■□□□□ 0.32
TARDBP-221ENST00000619555 MSH6P52701 1360 aa17.01■□□□□ 0.31
TARDBP-221ENST00000619555 ADAMTS13Q76LX8 1427 aa17■□□□□ 0.31
TARDBP-221ENST00000619555 ROBO1Q9Y6N7 1651 aa16.99■□□□□ 0.31
TARDBP-221ENST00000619555 SLAIN2Q9P270 581 aa16.98■□□□□ 0.31
TARDBP-221ENST00000619555 RGS17Q9UGC6 210 aaPredicted RBP16.97■□□□□ 0.31
TARDBP-221ENST00000619555 RRBP1Q9P2E9 1410 aaKnown RBP16.96■□□□□ 0.3
TARDBP-221ENST00000619555 C14orf37Q86TY3 774 aa16.95■□□□□ 0.3
TARDBP-221ENST00000619555 SPHKAPQ2M3C7 1700 aa16.93■□□□□ 0.3
TARDBP-221ENST00000619555 PIK3R4Q99570 1358 aa16.93■□□□□ 0.3
TARDBP-221ENST00000619555 ZNF326Q5BKZ1 582 aaKnown RBP16.93■□□□□ 0.3
TARDBP-221ENST00000619555 AMOTL2Q9Y2J4 779 aa16.93■□□□□ 0.3
TARDBP-221ENST00000619555 DIP2AQ14689 1571 aa16.93■□□□□ 0.3
TARDBP-221ENST00000619555 NAIPQ13075 1403 aa16.92■□□□□ 0.3
TARDBP-221ENST00000619555 PTPRUQ92729 1446 aa16.92■□□□□ 0.3
TARDBP-221ENST00000619555 NCOA3Q9Y6Q9 1424 aa16.92■□□□□ 0.3
TARDBP-221ENST00000619555 C19orf44Q9H6X5 657 aa16.9■□□□□ 0.3
TARDBP-221ENST00000619555 TRPM2O94759 1503 aa16.9■□□□□ 0.3
TARDBP-221ENST00000619555 PHLPP1O60346 1717 aa16.9■□□□□ 0.3
TARDBP-221ENST00000619555 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.89■□□□□ 0.29
TARDBP-221ENST00000619555 NRXN3Q9Y4C0 1643 aa16.88■□□□□ 0.29
TARDBP-221ENST00000619555 ATF3P18847 181 aa16.88■□□□□ 0.29
TARDBP-221ENST00000619555 CADPS2Q86UW7 1296 aa16.88■□□□□ 0.29
TARDBP-221ENST00000619555 TRIM52Q96A61 297 aa16.88■□□□□ 0.29
TARDBP-221ENST00000619555 CLTCL1P53675 1640 aa16.88■□□□□ 0.29
TARDBP-221ENST00000619555 POTEAQ6S8J7 498 aa16.87■□□□□ 0.29
TARDBP-221ENST00000619555 SETBP1Q9Y6X0 1596 aa16.86■□□□□ 0.29
TARDBP-221ENST00000619555 METP08581 1390 aa16.86■□□□□ 0.29
TARDBP-221ENST00000619555 JCADQ9P266 1359 aa16.86■□□□□ 0.29
TARDBP-221ENST00000619555 NEXMIFQ5QGS0 1516 aa16.84■□□□□ 0.29
TARDBP-221ENST00000619555 COL16A1Q07092 1604 aaPredicted RBP16.84■□□□□ 0.29
TARDBP-221ENST00000619555 FOXD1Q16676 465 aa16.83■□□□□ 0.28
TARDBP-221ENST00000619555 XRN1Q8IZH2 1706 aaKnown RBP16.83■□□□□ 0.28
TARDBP-221ENST00000619555 KIF1BO60333 1816 aa16.82■□□□□ 0.28
TARDBP-221ENST00000619555 HFM1A2PYH4 1435 aa16.82■□□□□ 0.28
TARDBP-221ENST00000619555 BRINP3Q76B58 766 aa16.81■□□□□ 0.28
TARDBP-221ENST00000619555 SLC4A1APQ9BWU0 796 aaKnown RBP16.81■□□□□ 0.28
TARDBP-221ENST00000619555 AHDC1Q5TGY3 1603 aaPredicted RBP16.79■□□□□ 0.28
TARDBP-221ENST00000619555 DCCP43146 1447 aa16.78■□□□□ 0.28
TARDBP-221ENST00000619555 VGFO15240 615 aaPredicted RBP16.77■□□□□ 0.28
TARDBP-221ENST00000619555 MST1RQ04912 1400 aa16.77■□□□□ 0.27
TARDBP-221ENST00000619555 LRP6O75581 1613 aa16.77■□□□□ 0.27
TARDBP-221ENST00000619555 SPATA31A6Q5VVP1 1343 aa16.76■□□□□ 0.27
TARDBP-221ENST00000619555 MEX3CQ5U5Q3 659 aaKnown RBP16.75■□□□□ 0.27
TARDBP-221ENST00000619555 RPGRIP1LQ68CZ1 1315 aa16.74■□□□□ 0.27
TARDBP-221ENST00000619555 ADGRL3Q9HAR2 1447 aa16.74■□□□□ 0.27
TARDBP-221ENST00000619555 ASXL1Q8IXJ9 1541 aa16.74■□□□□ 0.27
TARDBP-221ENST00000619555 SHPRHQ149N8 1683 aa16.73■□□□□ 0.27
TARDBP-221ENST00000619555 NUTM2BA6NNL0 878 aaPredicted RBP16.73■□□□□ 0.27
TARDBP-221ENST00000619555 NUTM2EB1AL46 878 aaPredicted RBP16.73■□□□□ 0.27
TARDBP-221ENST00000619555 NUTM2AQ8IVF1 878 aaPredicted RBP16.73■□□□□ 0.27
TARDBP-221ENST00000619555 DDX17Q92841 729 aaKnown RBP16.73■□□□□ 0.27
TARDBP-221ENST00000619555 SETD1AO15047 1707 aaKnown RBP16.72■□□□□ 0.27
TARDBP-221ENST00000619555 NALCNQ8IZF0 1738 aa16.72■□□□□ 0.27
TARDBP-221ENST00000619555 ROBO2Q9HCK4 1378 aa16.72■□□□□ 0.27
TARDBP-221ENST00000619555 PPLO60437 1756 aa16.7■□□□□ 0.26
TARDBP-221ENST00000619555 MPHOSPH9Q99550 1183 aa16.7■□□□□ 0.26
TARDBP-221ENST00000619555 NHSL1Q5SYE7 1610 aa16.7■□□□□ 0.26
TARDBP-221ENST00000619555 SETD5Q9C0A6 1442 aa16.7■□□□□ 0.26
TARDBP-221ENST00000619555 RGL3Q3MIN7 710 aa16.69■□□□□ 0.26
TARDBP-221ENST00000619555 PTCH1Q13635 1447 aa16.69■□□□□ 0.26
TARDBP-221ENST00000619555 ZNF772Q68DY9 489 aaPredicted RBP16.68■□□□□ 0.26
TARDBP-221ENST00000619555 LRRC59Q96AG4 307 aaKnown RBP16.68■□□□□ 0.26
TARDBP-221ENST00000619555 ADGRF5Q8IZF2 1346 aa16.68■□□□□ 0.26
TARDBP-221ENST00000619555 C1orf167Q5SNV9 1468 aa16.67■□□□□ 0.26
TARDBP-221ENST00000619555 CCDC144AA2RUR9 1427 aa16.66■□□□□ 0.26
TARDBP-221ENST00000619555 ORAI2Q96SN7 254 aa16.66■□□□□ 0.26
TARDBP-221ENST00000619555 SPATA31E1Q6ZUB1 1445 aa16.64■□□□□ 0.25
TARDBP-221ENST00000619555 PRAG1Q86YV5 1406 aa16.64■□□□□ 0.25
TARDBP-221ENST00000619555 PNPLA6Q8IY17 1366 aa16.64■□□□□ 0.25
TARDBP-221ENST00000619555 STK26Q9P289 416 aa16.63■□□□□ 0.25
TARDBP-221ENST00000619555 AFF2P51816 1311 aa16.63■□□□□ 0.25
TARDBP-221ENST00000619555 RXRBP28702 533 aa16.61■□□□□ 0.25
TARDBP-221ENST00000619555 TMEM132EQ6IEE7 984 aa16.61■□□□□ 0.25
TARDBP-221ENST00000619555 WAPLQ7Z5K2 1190 aa16.61■□□□□ 0.25
TARDBP-221ENST00000619555 C8orf37Q96NL8 207 aa16.6■□□□□ 0.25
TARDBP-221ENST00000619555 SOS2Q07890 1332 aaPredicted RBP16.6■□□□□ 0.25
TARDBP-221ENST00000619555 ANKRD30BQ9BXX2 1392 aa16.6■□□□□ 0.25
TARDBP-221ENST00000619555 LAMC1P11047 1609 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms