RNA–Protein interactions for RNA: ENST00000619259.4

SEM1-220, Transcript of SEM1, 26S proteasome complex subunit, humanhuman

TSL 2

Gene SEM1, Length 462 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEM1-220ENST00000619259 TMEM134Q9H6X4 195 aa8.47□□□□□ -1.05
SEM1-220ENST00000619259 LCE2DQ5TA82 110 aaPredicted RBP8.46□□□□□ -1.06
SEM1-220ENST00000619259 ANKRD13DQ6ZTN6 518 aa8.46□□□□□ -1.06
SEM1-220ENST00000619259 NBPF3Q9H094 633 aa8.46□□□□□ -1.06
SEM1-220ENST00000619259 RSPH6AQ9H0K4 717 aa8.46□□□□□ -1.06
SEM1-220ENST00000619259 SLC4A3P48751 1232 aa8.45□□□□□ -1.06
SEM1-220ENST00000619259 SWT1Q5T5J6 900 aaKnown RBP8.45□□□□□ -1.06
SEM1-220ENST00000619259 RSPH4AQ5TD94 716 aa8.45□□□□□ -1.06
SEM1-220ENST00000619259 PCMTD1Q96MG8 357 aaPredicted RBP8.45□□□□□ -1.06
SEM1-220ENST00000619259 RNF40O75150 1001 aa8.44□□□□□ -1.06
SEM1-220ENST00000619259 LSM11P83369 360 aaKnown RBP eCLIP8.44□□□□□ -1.06
SEM1-220ENST00000619259 FAM98CQ17RN3 349 aaKnown RBP8.44□□□□□ -1.06
SEM1-220ENST00000619259 NUTM1Q86Y26 1132 aa8.44□□□□□ -1.06
SEM1-220ENST00000619259 MRPL50Q8N5N7 158 aaKnown RBP8.44□□□□□ -1.06
SEM1-220ENST00000619259 ADGRD1Q6QNK2 874 aa8.43□□□□□ -1.06
SEM1-220ENST00000619259 POLR3EQ9NVU0 708 aa8.43□□□□□ -1.06
SEM1-220ENST00000619259 GOLGA8CPA6NN73 597 aa8.42□□□□□ -1.06
SEM1-220ENST00000619259 TK2O00142 265 aa8.42□□□□□ -1.06
SEM1-220ENST00000619259 CD46P15529 392 aa8.42□□□□□ -1.06
SEM1-220ENST00000619259 DIXDC1Q155Q3 683 aa8.41□□□□□ -1.06
SEM1-220ENST00000619259 SH3D19Q5HYK7 790 aa8.41□□□□□ -1.06
SEM1-220ENST00000619259 SAMD7Q7Z3H4 446 aa8.41□□□□□ -1.06
SEM1-220ENST00000619259 C14orf37Q86TY3 774 aa8.41□□□□□ -1.06
SEM1-220ENST00000619259 LAPTM4BQ86VI4 370 aa8.41□□□□□ -1.06
SEM1-220ENST00000619259 TBC1D2Q9BYX2 928 aa8.41□□□□□ -1.06
SEM1-220ENST00000619259 GOPCQ9HD26 462 aa8.41□□□□□ -1.06
SEM1-220ENST00000619259 SKIV2LQ15477 1246 aaKnown RBP8.4□□□□□ -1.06
SEM1-220ENST00000619259 BHMG1C9JSJ3 638 aaPredicted RBP8.39□□□□□ -1.07
SEM1-220ENST00000619259 MYSM1Q5VVJ2 828 aa8.39□□□□□ -1.07
SEM1-220ENST00000619259 ERICH6Q7L0X2 663 aa8.39□□□□□ -1.07
SEM1-220ENST00000619259 SLF2Q8IX21 1173 aa8.39□□□□□ -1.07
SEM1-220ENST00000619259 SPIRE2Q8WWL2 714 aa8.39□□□□□ -1.07
SEM1-220ENST00000619259 ZFRQ96KR1 1074 aaKnown RBP8.39□□□□□ -1.07
SEM1-220ENST00000619259 TIMELESSQ9UNS1 1208 aa8.39□□□□□ -1.07
SEM1-220ENST00000619259 PROCA1Q8NCQ7 364 aaPredicted RBP8.38□□□□□ -1.07
SEM1-220ENST00000619259 CLK2P49760 499 aaKnown RBP8.37□□□□□ -1.07
SEM1-220ENST00000619259 KDM4AO75164 1064 aa8.36□□□□□ -1.07
SEM1-220ENST00000619259 SLC10A3P09131 477 aa8.36□□□□□ -1.07
SEM1-220ENST00000619259 CSPP1Q1MSJ5 1256 aa8.36□□□□□ -1.07
SEM1-220ENST00000619259 RIC3Q7Z5B4 369 aa8.36□□□□□ -1.07
SEM1-220ENST00000619259 LRCH3Q96II8 777 aa8.36□□□□□ -1.07
SEM1-220ENST00000619259 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.36□□□□□ -1.07
SEM1-220ENST00000619259 GCGRP47871 477 aa8.35□□□□□ -1.07
SEM1-220ENST00000619259 HRO43593 1189 aa8.34□□□□□ -1.07
SEM1-220ENST00000619259 NDUFV2P19404 249 aa8.34□□□□□ -1.07
SEM1-220ENST00000619259 ANKK1Q8NFD2 765 aa8.34□□□□□ -1.07
SEM1-220ENST00000619259 MOXD2PA6NHM9 499 aa8.33□□□□□ -1.08
SEM1-220ENST00000619259 CFHP08603 1231 aa8.33□□□□□ -1.08
SEM1-220ENST00000619259 LIMD1Q9UGP4 676 aa8.33□□□□□ -1.08
SEM1-220ENST00000619259 KMT5BQ4FZB7 885 aa8.32□□□□□ -1.08
SEM1-220ENST00000619259 WNT2BQ93097 391 aa8.32□□□□□ -1.08
SEM1-220ENST00000619259 PPP4CP60510 307 aa8.31□□□□□ -1.08
SEM1-220ENST00000619259 USP46P62068 366 aa8.31□□□□□ -1.08
SEM1-220ENST00000619259 RSBN1LQ6PCB5 846 aaPredicted RBP8.31□□□□□ -1.08
SEM1-220ENST00000619259 NECTIN2Q92692 538 aa8.31□□□□□ -1.08
SEM1-220ENST00000619259 NUTM2BA6NNL0 878 aaPredicted RBP8.3□□□□□ -1.08
SEM1-220ENST00000619259 NUTM2EB1AL46 878 aaPredicted RBP8.3□□□□□ -1.08
SEM1-220ENST00000619259 BCAMP50895 628 aa8.3□□□□□ -1.08
SEM1-220ENST00000619259 GRIPAP1Q4V328 841 aa8.3□□□□□ -1.08
SEM1-220ENST00000619259 NUTM2DQ5VT03 806 aaPredicted RBP8.3□□□□□ -1.08
SEM1-220ENST00000619259 POTEGQ6S5H5 508 aa8.3□□□□□ -1.08
SEM1-220ENST00000619259 NUTM2AQ8IVF1 878 aaPredicted RBP8.3□□□□□ -1.08
SEM1-220ENST00000619259 SPTLC1O15269 473 aa8.29□□□□□ -1.08
SEM1-220ENST00000619259 HOXA2O43364 376 aa8.29□□□□□ -1.08
SEM1-220ENST00000619259 FUT2Q10981 343 aa8.29□□□□□ -1.08
SEM1-220ENST00000619259 CDAN1Q8IWY9 1227 aa8.29□□□□□ -1.08
SEM1-220ENST00000619259 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.29□□□□□ -1.085e-7■□□□□ 10.1
SEM1-220ENST00000619259 KRTAP3-3Q9BYR6 98 aa8.29□□□□□ -1.08
SEM1-220ENST00000619259 KRTAP3-2Q9BYR7 98 aa8.29□□□□□ -1.08
SEM1-220ENST00000619259 HPS5Q9UPZ3 1129 aa8.29□□□□□ -1.08
SEM1-220ENST00000619259 SOWAHBA6NEL2 793 aa8.28□□□□□ -1.08
SEM1-220ENST00000619259 POTEMA6NI47 508 aa8.28□□□□□ -1.08
SEM1-220ENST00000619259 FDX1P10109 184 aa8.28□□□□□ -1.08
SEM1-220ENST00000619259 GUCA2AQ02747 115 aa8.28□□□□□ -1.08
SEM1-220ENST00000619259 HLA-CQ95604 372 aa8.28□□□□□ -1.08
SEM1-220ENST00000619259 PCDHB15Q9Y5E8 787 aa8.28□□□□□ -1.08
SEM1-220ENST00000619259 FLIIQ13045 1269 aa8.27□□□□□ -1.09
SEM1-220ENST00000619259 ATP6V1AP38606 617 aa8.26□□□□□ -1.09
SEM1-220ENST00000619259 RFC5P40937 340 aa8.26□□□□□ -1.09
SEM1-220ENST00000619259 QPCTQ16769 361 aa8.26□□□□□ -1.09
SEM1-220ENST00000619259 KCTD12Q96CX2 325 aaKnown RBP8.26□□□□□ -1.09
SEM1-220ENST00000619259 PRR14Q9BWN1 585 aa8.26□□□□□ -1.09
SEM1-220ENST00000619259 TSR3Q9UJK0 312 aaKnown RBP8.26□□□□□ -1.09
SEM1-220ENST00000619259 PUS10Q3MIT2 529 aaKnown RBP8.25□□□□□ -1.09
SEM1-220ENST00000619259 CABLES1Q8TDN4 633 aa8.25□□□□□ -1.09
SEM1-220ENST00000619259 C6orf229H3BNL8 230 aa8.24□□□□□ -1.09
SEM1-220ENST00000619259 GJA5P36382 358 aa8.24□□□□□ -1.09
SEM1-220ENST00000619259 TUSC1Q2TAM9 212 aa8.24□□□□□ -1.09
SEM1-220ENST00000619259 TSC1Q92574 1164 aa8.24□□□□□ -1.09
SEM1-220ENST00000619259 ZBTB3Q9H5J0 574 aa8.24□□□□□ -1.09
SEM1-220ENST00000619259 ACTN4O43707 911 aaKnown RBP8.23□□□□□ -1.09
SEM1-220ENST00000619259 LILRB3O75022 631 aa8.23□□□□□ -1.09
SEM1-220ENST00000619259 PCDHGC3Q9UN70 934 aa8.23□□□□□ -1.09
SEM1-220ENST00000619259 AP1G2O75843 785 aa8.22□□□□□ -1.09
SEM1-220ENST00000619259 HRCP23327 699 aa8.22□□□□□ -1.09
SEM1-220ENST00000619259 MTMR2Q13614 643 aa8.22□□□□□ -1.09
SEM1-220ENST00000619259 TMEM259Q4ZIN3 620 aa8.22□□□□□ -1.09
SEM1-220ENST00000619259 RTL5Q5HYW3 569 aaPredicted RBP8.22□□□□□ -1.09
SEM1-220ENST00000619259 PRPF38BQ5VTL8 546 aaKnown RBP8.22□□□□□ -1.09
SEM1-220ENST00000619259 FBXO31Q5XUX0 539 aaPredicted RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms