RNA–Protein interactions for RNA: ENST00000619157.4

CBWD1-228, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 1,227 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-228ENST00000619157 ATAD2BQ9ULI0 1458 aa14.21□□□□□ -0.13
CBWD1-228ENST00000619157 NCAPD3P42695 1498 aa14.2□□□□□ -0.14
CBWD1-228ENST00000619157 RTN4Q9NQC3 1192 aaKnown RBP14.2□□□□□ -0.14
CBWD1-228ENST00000619157 BAZ1AQ9NRL2 1556 aaPredicted RBP14.19□□□□□ -0.14
CBWD1-228ENST00000619157 AMER1Q5JTC6 1135 aaPredicted RBP14.19□□□□□ -0.14
CBWD1-228ENST00000619157 MROH2BQ7Z745 1585 aa14.18□□□□□ -0.14
CBWD1-228ENST00000619157 MLLT3P42568 568 aaPredicted RBP14.18□□□□□ -0.14
CBWD1-228ENST00000619157 EYA1Q99502 592 aa14.18□□□□□ -0.14
CBWD1-228ENST00000619157 NECTIN2Q92692 538 aa14.16□□□□□ -0.14
CBWD1-228ENST00000619157 PDZRN3Q9UPQ7 1066 aa14.16□□□□□ -0.14
CBWD1-228ENST00000619157 GGCXP38435 758 aa14.14□□□□□ -0.15
CBWD1-228ENST00000619157 SMARCA2P51531 1590 aa14.13□□□□□ -0.15
CBWD1-228ENST00000619157 PEG3Q9GZU2 1588 aa14.13□□□□□ -0.15
CBWD1-228ENST00000619157 ZPR1O75312 459 aa14.13□□□□□ -0.15
CBWD1-228ENST00000619157 SLC4A3P48751 1232 aa14.13□□□□□ -0.15
CBWD1-228ENST00000619157 PCDHB3Q9Y5E6 796 aa14.12□□□□□ -0.15
CBWD1-228ENST00000619157 HMGXB3Q12766 1538 aa14.11□□□□□ -0.15
CBWD1-228ENST00000619157 BLOC1S3Q6QNY0 202 aa14.11□□□□□ -0.15
CBWD1-228ENST00000619157 TLL1O43897 1013 aa14.1□□□□□ -0.15
CBWD1-228ENST00000619157 FAM161AQ3B820 660 aa14.07□□□□□ -0.16
CBWD1-228ENST00000619157 KCNV2Q8TDN2 545 aa14.07□□□□□ -0.16
CBWD1-228ENST00000619157 PTGDRQ13258 359 aa14.06□□□□□ -0.16
CBWD1-228ENST00000619157 TSHZ2Q9NRE2 1034 aa14.06□□□□□ -0.16
CBWD1-228ENST00000619157 RNF223E7ERA6 249 aa14.05□□□□□ -0.16
CBWD1-228ENST00000619157 DNAJB2P25686 324 aa14.05□□□□□ -0.16
CBWD1-228ENST00000619157 ARHGEF1Q92888 912 aaKnown RBP14.05□□□□□ -0.16
CBWD1-228ENST00000619157 TMUB1Q9BVT8 246 aa14.05□□□□□ -0.16
CBWD1-228ENST00000619157 PRR14Q9BWN1 585 aa14.05□□□□□ -0.16
CBWD1-228ENST00000619157 BAZ1BQ9UIG0 1483 aaKnown RBP14.05□□□□□ -0.16
CBWD1-228ENST00000619157 EMID1Q96A84 441 aaPredicted RBP14.03□□□□□ -0.16
CBWD1-228ENST00000619157 ADGRG1Q9Y653 693 aa14.03□□□□□ -0.16
CBWD1-228ENST00000619157 NUTM2FA1L443 756 aa14.01□□□□□ -0.17
CBWD1-228ENST00000619157 ZNF787Q6DD87 383 aa14.01□□□□□ -0.17
CBWD1-228ENST00000619157 RBM46Q8TBY0 533 aaKnown RBP14.01□□□□□ -0.17
CBWD1-228ENST00000619157 TMEM134Q9H6X4 195 aa14.01□□□□□ -0.17
CBWD1-228ENST00000619157 WIZO95785 1651 aa14.01□□□□□ -0.17
CBWD1-228ENST00000619157 PPEF1O14829 653 aaPredicted RBP14□□□□□ -0.17
CBWD1-228ENST00000619157 SLC19A1P41440 591 aa14□□□□□ -0.17
CBWD1-228ENST00000619157 TRIM67Q6ZTA4 783 aa14□□□□□ -0.17
CBWD1-228ENST00000619157 RCCD1A6NED2 376 aa13.99□□□□□ -0.17
CBWD1-228ENST00000619157 CFHP08603 1231 aa13.99□□□□□ -0.17
CBWD1-228ENST00000619157 S1PR4O95977 384 aa13.98□□□□□ -0.17
CBWD1-228ENST00000619157 RSF1Q96T23 1441 aaPredicted RBP13.98□□□□□ -0.17
CBWD1-228ENST00000619157 KMT5BQ4FZB7 885 aa13.96□□□□□ -0.17
CBWD1-228ENST00000619157 ACTN4O43707 911 aaKnown RBP13.95□□□□□ -0.18
CBWD1-228ENST00000619157 NESP48681 1621 aa13.93□□□□□ -0.18
CBWD1-228ENST00000619157 SLC10A3P09131 477 aa13.92□□□□□ -0.18
CBWD1-228ENST00000619157 SPRYD7Q5W111 196 aa13.92□□□□□ -0.18
CBWD1-228ENST00000619157 LIAT1Q6ZQX7 453 aa13.91□□□□□ -0.18
CBWD1-228ENST00000619157 ANKLE1Q8NAG6 615 aa13.91□□□□□ -0.18
CBWD1-228ENST00000619157 PKDCCQ504Y2 493 aa13.89□□□□□ -0.19
CBWD1-228ENST00000619157 ADH1BP00325 375 aa13.88□□□□□ -0.19
CBWD1-228ENST00000619157 ZNF697Q5TEC3 545 aa13.88□□□□□ -0.19
CBWD1-228ENST00000619157 ZNF598Q86UK7 904 aaKnown RBP13.88□□□□□ -0.19
CBWD1-228ENST00000619157 TNFRSF10AO00220 468 aa13.87□□□□□ -0.19
CBWD1-228ENST00000619157 FCHSD2O94868 740 aa13.87□□□□□ -0.19
CBWD1-228ENST00000619157 ZNF775Q96BV0 537 aaPredicted RBP13.87□□□□□ -0.19
CBWD1-228ENST00000619157 SEMA3EO15041 775 aa13.86□□□□□ -0.19
CBWD1-228ENST00000619157 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.85□□□□□ -0.19
CBWD1-228ENST00000619157 MYT1Q01538 1121 aa13.85□□□□□ -0.19
CBWD1-228ENST00000619157 PLA2G2CQ5R387 149 aa13.85□□□□□ -0.19
CBWD1-228ENST00000619157 NR1I2O75469 434 aa13.84□□□□□ -0.19
CBWD1-228ENST00000619157 PUS10Q3MIT2 529 aaKnown RBP13.84□□□□□ -0.19
CBWD1-228ENST00000619157 FAM187AA6NFU0 413 aa13.83□□□□□ -0.2
CBWD1-228ENST00000619157 PXYLP1Q8TE99 480 aa13.83□□□□□ -0.2
CBWD1-228ENST00000619157 SLC6A16Q9GZN6 736 aa13.83□□□□□ -0.2
CBWD1-228ENST00000619157 TOP2AP11388 1531 aaKnown RBP13.83□□□□□ -0.2
CBWD1-228ENST00000619157 PRR20EP86478 221 aa13.82□□□□□ -0.2
CBWD1-228ENST00000619157 PRR20CP86479 221 aa13.82□□□□□ -0.2
CBWD1-228ENST00000619157 PRR20DP86480 221 aa13.82□□□□□ -0.2
CBWD1-228ENST00000619157 PRR20BP86481 221 aa13.82□□□□□ -0.2
CBWD1-228ENST00000619157 PRR20AP86496 221 aa13.82□□□□□ -0.2
CBWD1-228ENST00000619157 POTECB2RU33 542 aa13.81□□□□□ -0.2
CBWD1-228ENST00000619157 LAMC3Q9Y6N6 1575 aa13.8□□□□□ -0.2
CBWD1-228ENST00000619157 DGAT1O75907 488 aa13.8□□□□□ -0.2
CBWD1-228ENST00000619157 ERCC6Q03468 1493 aa13.8□□□□□ -0.2
CBWD1-228ENST00000619157 GDF9O60383 454 aa13.79□□□□□ -0.2
CBWD1-228ENST00000619157 SCUBE3Q8IX30 993 aa13.79□□□□□ -0.2
CBWD1-228ENST00000619157 METTL3Q86U44 580 aaKnown RBP13.77□□□□□ -0.21
CBWD1-228ENST00000619157 P3H3Q8IVL6 736 aa13.77□□□□□ -0.21
CBWD1-228ENST00000619157 CADPSQ9ULU8 1353 aa13.77□□□□□ -0.21
CBWD1-228ENST00000619157 OATP04181 439 aa13.76□□□□□ -0.21
CBWD1-228ENST00000619157 ST8SIA5O15466 376 aa13.74□□□□□ -0.21
CBWD1-228ENST00000619157 FOXC1Q12948 553 aa13.74□□□□□ -0.21
CBWD1-228ENST00000619157 RBM26Q5T8P6 1007 aaKnown RBP13.74□□□□□ -0.21
CBWD1-228ENST00000619157 NLRP7Q8WX94 980 aa13.74□□□□□ -0.21
CBWD1-228ENST00000619157 SPSB2Q99619 263 aa13.74□□□□□ -0.21
CBWD1-228ENST00000619157 FECHP22830 423 aa13.73□□□□□ -0.21
CBWD1-228ENST00000619157 THOC2Q8NI27 1593 aaKnown RBP13.72□□□□□ -0.21
CBWD1-228ENST00000619157 HIC1Q14526 733 aa13.72□□□□□ -0.21
CBWD1-228ENST00000619157 RDH13Q8NBN7 331 aa13.72□□□□□ -0.21
CBWD1-228ENST00000619157 KIF21AQ7Z4S6 1674 aa13.72□□□□□ -0.21
CBWD1-228ENST00000619157 CUX2O14529 1486 aa13.7□□□□□ -0.22
CBWD1-228ENST00000619157 RSPH4AQ5TD94 716 aa13.7□□□□□ -0.22
CBWD1-228ENST00000619157 CCDC88BA6NC98 1476 aa13.69□□□□□ -0.22
CBWD1-228ENST00000619157 CFTRP13569 1480 aa13.69□□□□□ -0.22
CBWD1-228ENST00000619157 PKD2L1Q9P0L9 805 aa13.69□□□□□ -0.22
CBWD1-228ENST00000619157 PDS5BQ9NTI5 1447 aa13.69□□□□□ -0.22
CBWD1-228ENST00000619157 DDX11L8A8MPP1 907 aa13.67□□□□□ -0.22
CBWD1-228ENST00000619157 FUT2Q10981 343 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms