RNA–Protein interactions for RNA: ENST00000618533.4

RPP40-207, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5 BASIC

Gene RPP40, Length 1,056 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-207ENST00000618533 CCDC144AA2RUR9 1427 aa23.04■■□□□ 1.28
RPP40-207ENST00000618533 RIMS2Q9UQ26 1411 aa23.04■■□□□ 1.28
RPP40-207ENST00000618533 FOXD1Q16676 465 aa23.01■■□□□ 1.27
RPP40-207ENST00000618533 PLEKHG1Q9ULL1 1385 aa22.98■■□□□ 1.27
RPP40-207ENST00000618533 PPP1R15AO75807 674 aaPredicted RBP22.97■■□□□ 1.27
RPP40-207ENST00000618533 LTBP4Q8N2S1 1624 aa22.97■■□□□ 1.27
RPP40-207ENST00000618533 ZNF326Q5BKZ1 582 aaKnown RBP22.95■■□□□ 1.26
RPP40-207ENST00000618533 NEXMIFQ5QGS0 1516 aa22.95■■□□□ 1.26
RPP40-207ENST00000618533 RPGRIP1LQ68CZ1 1315 aa22.95■■□□□ 1.26
RPP40-207ENST00000618533 ANKRD30BQ9BXX2 1392 aa22.94■■□□□ 1.26
RPP40-207ENST00000618533 DIP2AQ14689 1571 aa22.93■■□□□ 1.26
RPP40-207ENST00000618533 CPS1P31327 1500 aa22.92■■□□□ 1.26
RPP40-207ENST00000618533 SPATA31E1Q6ZUB1 1445 aa22.92■■□□□ 1.26
RPP40-207ENST00000618533 PPLO60437 1756 aa22.91■■□□□ 1.26
RPP40-207ENST00000618533 ZNF335Q9H4Z2 1342 aaPredicted RBP22.91■■□□□ 1.26
RPP40-207ENST00000618533 IQSEC2Q5JU85 1478 aa22.91■■□□□ 1.26
RPP40-207ENST00000618533 SETBP1Q9Y6X0 1596 aa22.89■■□□□ 1.25
RPP40-207ENST00000618533 CERKQ8TCT0 537 aa22.88■■□□□ 1.25
RPP40-207ENST00000618533 IFT172Q9UG01 1749 aa22.88■■□□□ 1.25
RPP40-207ENST00000618533 VGFO15240 615 aaPredicted RBP22.87■■□□□ 1.25
RPP40-207ENST00000618533 BCANQ96GW7 911 aa22.87■■□□□ 1.25
RPP40-207ENST00000618533 TBX22Q9Y458 520 aa22.86■■□□□ 1.25
RPP40-207ENST00000618533 ADAMTS13Q76LX8 1427 aa22.84■■□□□ 1.25
RPP40-207ENST00000618533 STRCP1A6NGW2 1772 aa22.84■■□□□ 1.25
RPP40-207ENST00000618533 NRXN3Q9Y4C0 1643 aa22.84■■□□□ 1.25
RPP40-207ENST00000618533 NUTM2DQ5VT03 806 aaPredicted RBP22.84■■□□□ 1.25
RPP40-207ENST00000618533 PIK3R4Q99570 1358 aa22.84■■□□□ 1.25
RPP40-207ENST00000618533 SLC26A8Q96RN1 970 aa22.83■■□□□ 1.25
RPP40-207ENST00000618533 NWD1Q149M9 1564 aa22.83■■□□□ 1.25
RPP40-207ENST00000618533 CHD2O14647 1828 aaKnown RBP22.82■■□□□ 1.24
RPP40-207ENST00000618533 KCNA6P17658 529 aa22.8■■□□□ 1.24
RPP40-207ENST00000618533 NKTRP30414 1462 aaKnown RBP22.79■■□□□ 1.24
RPP40-207ENST00000618533 RGL3Q3MIN7 710 aa22.79■■□□□ 1.24
RPP40-207ENST00000618533 MYOM2P54296 1465 aa22.77■■□□□ 1.24
RPP40-207ENST00000618533 DHX57Q6P158 1386 aaKnown RBP22.76■■□□□ 1.23
RPP40-207ENST00000618533 STAC3Q96MF2 364 aa22.76■■□□□ 1.23
RPP40-207ENST00000618533 LRRC7Q96NW7 1537 aa22.76■■□□□ 1.23
RPP40-207ENST00000618533 SETD1AO15047 1707 aaKnown RBP22.75■■□□□ 1.23
RPP40-207ENST00000618533 ILDR1Q86SU0 546 aaPredicted RBP22.75■■□□□ 1.23
RPP40-207ENST00000618533 ALKQ9UM73 1620 aa22.73■■□□□ 1.23
RPP40-207ENST00000618533 FBXO41Q8TF61 875 aa22.73■■□□□ 1.23
RPP40-207ENST00000618533 NRXN1Q9ULB1 1477 aa22.73■■□□□ 1.23
RPP40-207ENST00000618533 PIK3C2GO75747 1445 aa22.72■■□□□ 1.23
RPP40-207ENST00000618533 SENP3Q9H4L4 574 aaPredicted RBP22.71■■□□□ 1.23
RPP40-207ENST00000618533 LAMC1P11047 1609 aa22.71■■□□□ 1.23
RPP40-207ENST00000618533 XRN1Q8IZH2 1706 aaKnown RBP22.71■■□□□ 1.23
RPP40-207ENST00000618533 ADGRF5Q8IZF2 1346 aa22.7■■□□□ 1.22
RPP40-207ENST00000618533 XIRP1Q702N8 1843 aaKnown RBP22.7■■□□□ 1.22
RPP40-207ENST00000618533 PCGF6Q9BYE7 350 aa22.69■■□□□ 1.22
RPP40-207ENST00000618533 NCOA3Q9Y6Q9 1424 aa22.67■■□□□ 1.22
RPP40-207ENST00000618533 METP08581 1390 aa22.67■■□□□ 1.22
RPP40-207ENST00000618533 PRAG1Q86YV5 1406 aa22.66■■□□□ 1.22
RPP40-207ENST00000618533 PTPRUQ92729 1446 aa22.66■■□□□ 1.22
RPP40-207ENST00000618533 PROSER2Q86WR7 435 aaPredicted RBP22.66■■□□□ 1.22
RPP40-207ENST00000618533 AMOTL2Q9Y2J4 779 aa22.65■■□□□ 1.22
RPP40-207ENST00000618533 TMEM94Q12767 1356 aa22.64■■□□□ 1.22
RPP40-207ENST00000618533 DCAF11Q8TEB1 546 aa22.63■■□□□ 1.21
RPP40-207ENST00000618533 TOM1O60784 492 aa22.61■■□□□ 1.21
RPP40-207ENST00000618533 PTCH1Q13635 1447 aa22.61■■□□□ 1.21
RPP40-207ENST00000618533 C14orf93Q9H972 538 aaKnown RBP22.61■■□□□ 1.21
RPP40-207ENST00000618533 KNDC1Q76NI1 1749 aa22.6■■□□□ 1.21
RPP40-207ENST00000618533 UBAP1LF5GYI3 381 aa22.58■■□□□ 1.21
RPP40-207ENST00000618533 SIN3AQ96ST3 1273 aa22.57■■□□□ 1.2
RPP40-207ENST00000618533 MSH6P52701 1360 aa22.57■■□□□ 1.2
RPP40-207ENST00000618533 KIAA1210Q9ULL0 1709 aa22.57■■□□□ 1.2
RPP40-207ENST00000618533 ASXL1Q8IXJ9 1541 aa22.57■■□□□ 1.2
RPP40-207ENST00000618533 TECPR2O15040 1411 aa22.57■■□□□ 1.2
RPP40-207ENST00000618533 LRPPRCP42704 1394 aaKnown RBP22.56■■□□□ 1.2
RPP40-207ENST00000618533 KDM2AQ9Y2K7 1162 aa22.56■■□□□ 1.2
RPP40-207ENST00000618533 CLSPNQ9HAW4 1339 aa22.55■■□□□ 1.2
RPP40-207ENST00000618533 ABCC11Q96J66 1382 aa22.54■■□□□ 1.2
RPP40-207ENST00000618533 NEUROD1Q13562 356 aa22.53■■□□□ 1.2
RPP40-207ENST00000618533 CFAP70Q5T0N1 1121 aa22.53■■□□□ 1.2
RPP40-207ENST00000618533 YTHDC2Q9H6S0 1430 aaKnown RBP22.53■■□□□ 1.2
RPP40-207ENST00000618533 DCCP43146 1447 aa22.52■■□□□ 1.2
RPP40-207ENST00000618533 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.51■■□□□ 1.19
RPP40-207ENST00000618533 ADGRB1O14514 1584 aa22.51■■□□□ 1.19
RPP40-207ENST00000618533 C14orf37Q86TY3 774 aa22.51■■□□□ 1.19
RPP40-207ENST00000618533 L3MBTL2Q969R5 705 aa22.51■■□□□ 1.19
RPP40-207ENST00000618533 C19orf44Q9H6X5 657 aa22.51■■□□□ 1.19
RPP40-207ENST00000618533 SIRT1Q96EB6 747 aa22.5■■□□□ 1.19
RPP40-207ENST00000618533 ROBO2Q9HCK4 1378 aa22.5■■□□□ 1.19
RPP40-207ENST00000618533 ADGRL3Q9HAR2 1447 aa22.49■■□□□ 1.19
RPP40-207ENST00000618533 TMEM132EQ6IEE7 984 aa22.49■■□□□ 1.19
RPP40-207ENST00000618533 RBM33Q96EV2 1170 aaKnown RBP22.49■■□□□ 1.19
RPP40-207ENST00000618533 FAM135BQ49AJ0 1406 aa22.48■■□□□ 1.19
RPP40-207ENST00000618533 NALCNQ8IZF0 1738 aa22.48■■□□□ 1.19
RPP40-207ENST00000618533 DLC1Q96QB1 1528 aa22.48■■□□□ 1.19
RPP40-207ENST00000618533 TONSLQ96HA7 1378 aa22.48■■□□□ 1.19
RPP40-207ENST00000618533 CADPS2Q86UW7 1296 aa22.47■■□□□ 1.19
RPP40-207ENST00000618533 ATF3P18847 181 aa22.45■■□□□ 1.18
RPP40-207ENST00000618533 STK26Q9P289 416 aa22.45■■□□□ 1.18
RPP40-207ENST00000618533 PIP4K2BP78356 416 aa22.42■■□□□ 1.18
RPP40-207ENST00000618533 SCAF1Q9H7N4 1312 aaKnown RBP22.41■■□□□ 1.18
RPP40-207ENST00000618533 TRPM1Q7Z4N2 1603 aa22.41■■□□□ 1.18
RPP40-207ENST00000618533 CDC42BPGQ6DT37 1551 aa22.41■■□□□ 1.18
RPP40-207ENST00000618533 SLAIN2Q9P270 581 aa22.4■■□□□ 1.18
RPP40-207ENST00000618533 TIMELESSQ9UNS1 1208 aa22.39■■□□□ 1.17
RPP40-207ENST00000618533 ROBO1Q9Y6N7 1651 aa22.39■■□□□ 1.17
RPP40-207ENST00000618533 ARHGEF28Q8N1W1 1705 aaKnown RBP22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms