RNA–Protein interactions for RNA: ENST00000618102.4

RCC1L-206, Transcript of RCC1 like, humanhuman

TSL 2

Gene RCC1L, Length 950 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1L-206ENST00000618102 IQGAP3Q86VI3 1631 aa24.49■■□□□ 1.51
RCC1L-206ENST00000618102 E9PCH4 1651 aa24.49■■□□□ 1.51
RCC1L-206ENST00000618102 ROBO1Q9Y6N7 1651 aa24.49■■□□□ 1.51
RCC1L-206ENST00000618102 BCANQ96GW7 911 aa24.46■■□□□ 1.51
RCC1L-206ENST00000618102 SLC26A8Q96RN1 970 aa24.46■■□□□ 1.51
RCC1L-206ENST00000618102 ZFYVE9O95405 1425 aa24.45■■□□□ 1.51
RCC1L-206ENST00000618102 KCNA6P17658 529 aa24.45■■□□□ 1.5
RCC1L-206ENST00000618102 FAM135BQ49AJ0 1406 aa24.43■■□□□ 1.5
RCC1L-206ENST00000618102 RIMS2Q9UQ26 1411 aa24.43■■□□□ 1.5
RCC1L-206ENST00000618102 ROCK1Q13464 1354 aa24.42■■□□□ 1.5
RCC1L-206ENST00000618102 PLEKHG1Q9ULL1 1385 aa24.42■■□□□ 1.5
RCC1L-206ENST00000618102 CHD2O14647 1828 aaKnown RBP24.42■■□□□ 1.5
RCC1L-206ENST00000618102 PPP1R15AO75807 674 aaPredicted RBP24.42■■□□□ 1.5
RCC1L-206ENST00000618102 PROSER2Q86WR7 435 aaPredicted RBP24.41■■□□□ 1.5
RCC1L-206ENST00000618102 DIP2AQ14689 1571 aa24.41■■□□□ 1.5
RCC1L-206ENST00000618102 MSH6P52701 1360 aa24.4■■□□□ 1.5
RCC1L-206ENST00000618102 HDGFP51858 240 aaKnown RBP24.38■■□□□ 1.49
RCC1L-206ENST00000618102 PHLPP1O60346 1717 aa24.36■■□□□ 1.49
RCC1L-206ENST00000618102 CHGAP10645 457 aaKnown RBP24.34■■□□□ 1.49
RCC1L-206ENST00000618102 RBM33Q96EV2 1170 aaKnown RBP24.34■■□□□ 1.49
RCC1L-206ENST00000618102 SPHKAPQ2M3C7 1700 aa24.34■■□□□ 1.49
RCC1L-206ENST00000618102 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.32■■□□□ 1.48
RCC1L-206ENST00000618102 TRPM2O94759 1503 aa24.31■■□□□ 1.48
RCC1L-206ENST00000618102 NUP155O75694 1391 aa24.29■■□□□ 1.48
RCC1L-206ENST00000618102 ITGAEP38570 1179 aa24.28■■□□□ 1.48
RCC1L-206ENST00000618102 ADAMTS13Q76LX8 1427 aa24.27■■□□□ 1.48
RCC1L-206ENST00000618102 NCOA3Q9Y6Q9 1424 aa24.26■■□□□ 1.47
RCC1L-206ENST00000618102 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.25■■□□□ 1.47
RCC1L-206ENST00000618102 C14orf37Q86TY3 774 aa24.25■■□□□ 1.47
RCC1L-206ENST00000618102 PIK3R4Q99570 1358 aa24.25■■□□□ 1.47
RCC1L-206ENST00000618102 COL16A1Q07092 1604 aaPredicted RBP24.24■■□□□ 1.47
RCC1L-206ENST00000618102 TBX22Q9Y458 520 aa24.24■■□□□ 1.47
RCC1L-206ENST00000618102 NUTM2DQ5VT03 806 aaPredicted RBP24.22■■□□□ 1.47
RCC1L-206ENST00000618102 SLAIN2Q9P270 581 aa24.22■■□□□ 1.47
RCC1L-206ENST00000618102 XRN1Q8IZH2 1706 aaKnown RBP24.21■■□□□ 1.47
RCC1L-206ENST00000618102 NRXN3Q9Y4C0 1643 aa24.21■■□□□ 1.47
RCC1L-206ENST00000618102 SETBP1Q9Y6X0 1596 aa24.2■■□□□ 1.47
RCC1L-206ENST00000618102 JCADQ9P266 1359 aa24.19■■□□□ 1.46
RCC1L-206ENST00000618102 AHDC1Q5TGY3 1603 aaPredicted RBP24.18■■□□□ 1.46
RCC1L-206ENST00000618102 RGS17Q9UGC6 210 aaPredicted RBP24.18■■□□□ 1.46
RCC1L-206ENST00000618102 CLTCL1P53675 1640 aa24.17■■□□□ 1.46
RCC1L-206ENST00000618102 SHPRHQ149N8 1683 aa24.16■■□□□ 1.46
RCC1L-206ENST00000618102 PPARGC1BQ86YN6 1023 aaKnown RBP24.16■■□□□ 1.46
RCC1L-206ENST00000618102 KIF1BO60333 1816 aa24.15■■□□□ 1.46
RCC1L-206ENST00000618102 CADPS2Q86UW7 1296 aa24.14■■□□□ 1.45
RCC1L-206ENST00000618102 ATF3P18847 181 aa24.13■■□□□ 1.45
RCC1L-206ENST00000618102 DCCP43146 1447 aa24.12■■□□□ 1.45
RCC1L-206ENST00000618102 SETD1AO15047 1707 aaKnown RBP24.12■■□□□ 1.45
RCC1L-206ENST00000618102 PTPRUQ92729 1446 aa24.11■■□□□ 1.45
RCC1L-206ENST00000618102 NEXMIFQ5QGS0 1516 aa24.11■■□□□ 1.45
RCC1L-206ENST00000618102 ZNF326Q5BKZ1 582 aaKnown RBP24.11■■□□□ 1.45
RCC1L-206ENST00000618102 RRBP1Q9P2E9 1410 aaKnown RBP24.1■■□□□ 1.45
RCC1L-206ENST00000618102 C19orf44Q9H6X5 657 aa24.1■■□□□ 1.45
RCC1L-206ENST00000618102 AMOTL2Q9Y2J4 779 aa24.09■■□□□ 1.45
RCC1L-206ENST00000618102 POTEAQ6S8J7 498 aa24.08■■□□□ 1.45
RCC1L-206ENST00000618102 NALCNQ8IZF0 1738 aa24.07■■□□□ 1.44
RCC1L-206ENST00000618102 LRP6O75581 1613 aa24.07■■□□□ 1.44
RCC1L-206ENST00000618102 ASXL1Q8IXJ9 1541 aa24.07■■□□□ 1.44
RCC1L-206ENST00000618102 SPATA31A6Q5VVP1 1343 aa24.07■■□□□ 1.44
RCC1L-206ENST00000618102 NHSL1Q5SYE7 1610 aa24.06■■□□□ 1.44
RCC1L-206ENST00000618102 NAIPQ13075 1403 aa24.05■■□□□ 1.44
RCC1L-206ENST00000618102 MEX3CQ5U5Q3 659 aaKnown RBP24.04■■□□□ 1.44
RCC1L-206ENST00000618102 ADGRL3Q9HAR2 1447 aa24.01■■□□□ 1.43
RCC1L-206ENST00000618102 METP08581 1390 aa24.01■■□□□ 1.43
RCC1L-206ENST00000618102 MST1RQ04912 1400 aa24.01■■□□□ 1.43
RCC1L-206ENST00000618102 BRINP3Q76B58 766 aa23.99■■□□□ 1.43
RCC1L-206ENST00000618102 HFM1A2PYH4 1435 aa23.99■■□□□ 1.43
RCC1L-206ENST00000618102 PPLO60437 1756 aa23.96■■□□□ 1.43
RCC1L-206ENST00000618102 PTCH1Q13635 1447 aa23.94■■□□□ 1.42
RCC1L-206ENST00000618102 ZNF772Q68DY9 489 aaPredicted RBP23.94■■□□□ 1.42
RCC1L-206ENST00000618102 TRIM52Q96A61 297 aa23.93■■□□□ 1.42
RCC1L-206ENST00000618102 SETD5Q9C0A6 1442 aa23.93■■□□□ 1.42
RCC1L-206ENST00000618102 NUTM2BA6NNL0 878 aaPredicted RBP23.88■■□□□ 1.41
RCC1L-206ENST00000618102 NUTM2EB1AL46 878 aaPredicted RBP23.88■■□□□ 1.41
RCC1L-206ENST00000618102 NUTM2AQ8IVF1 878 aaPredicted RBP23.88■■□□□ 1.41
RCC1L-206ENST00000618102 LAMC1P11047 1609 aa23.88■■□□□ 1.41
RCC1L-206ENST00000618102 PRAG1Q86YV5 1406 aa23.87■■□□□ 1.41
RCC1L-206ENST00000618102 VGFO15240 615 aaPredicted RBP23.87■■□□□ 1.41
RCC1L-206ENST00000618102 SLC4A1APQ9BWU0 796 aaKnown RBP23.87■■□□□ 1.41
RCC1L-206ENST00000618102 C1orf167Q5SNV9 1468 aa23.84■■□□□ 1.41
RCC1L-206ENST00000618102 LRRC59Q96AG4 307 aaKnown RBP23.84■■□□□ 1.41
RCC1L-206ENST00000618102 RPGRIP1LQ68CZ1 1315 aa23.84■■□□□ 1.41
RCC1L-206ENST00000618102 PNPLA6Q8IY17 1366 aa23.83■■□□□ 1.41
RCC1L-206ENST00000618102 IFT172Q9UG01 1749 aa23.83■■□□□ 1.41
RCC1L-206ENST00000618102 ROBO2Q9HCK4 1378 aa23.82■■□□□ 1.4
RCC1L-206ENST00000618102 CDC42BPGQ6DT37 1551 aa23.82■■□□□ 1.4
RCC1L-206ENST00000618102 CDK12Q9NYV4 1490 aaPredicted RBP23.81■■□□□ 1.4
RCC1L-206ENST00000618102 AFF2P51816 1311 aa23.81■■□□□ 1.4
RCC1L-206ENST00000618102 CCDC144AA2RUR9 1427 aa23.8■■□□□ 1.4
RCC1L-206ENST00000618102 RXRBP28702 533 aa23.78■■□□□ 1.4
RCC1L-206ENST00000618102 DDX17Q92841 729 aaKnown RBP23.78■■□□□ 1.4
RCC1L-206ENST00000618102 KNDC1Q76NI1 1749 aa23.77■■□□□ 1.4
RCC1L-206ENST00000618102 C8orf37Q96NL8 207 aa23.76■■□□□ 1.39
RCC1L-206ENST00000618102 COL22A1Q8NFW1 1626 aaPredicted RBP23.74■■□□□ 1.39
RCC1L-206ENST00000618102 RGS12O14924 1447 aa23.71■■□□□ 1.39
RCC1L-206ENST00000618102 FOXD1Q16676 465 aa23.71■■□□□ 1.39
RCC1L-206ENST00000618102 SPATA31E1Q6ZUB1 1445 aa23.69■■□□□ 1.38
RCC1L-206ENST00000618102 ANKRD30BQ9BXX2 1392 aa23.69■■□□□ 1.38
RCC1L-206ENST00000618102 SOS2Q07890 1332 aaPredicted RBP23.69■■□□□ 1.38
RCC1L-206ENST00000618102 UPF1Q92900 1129 aaKnown RBP eCLIP23.69■■□□□ 1.384e-7■■■■□ 25
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms