RNA–Protein interactions for RNA: ENST00000615732.1

COL4A1-205, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 5

Gene COL4A1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-205ENST00000615732 NKTRP30414 1462 aaKnown RBP16.18■□□□□ 0.18
COL4A1-205ENST00000615732 KCNA6P17658 529 aa16.18■□□□□ 0.18
COL4A1-205ENST00000615732 RBM33Q96EV2 1170 aaKnown RBP16.18■□□□□ 0.18
COL4A1-205ENST00000615732 GCC2Q8IWJ2 1684 aa16.15■□□□□ 0.18
COL4A1-205ENST00000615732 MYO5BQ9ULV0 1848 aa16.15■□□□□ 0.18
COL4A1-205ENST00000615732 HRCP23327 699 aa16.15■□□□□ 0.18
COL4A1-205ENST00000615732 ZFYVE9O95405 1425 aa16.14■□□□□ 0.17
COL4A1-205ENST00000615732 PROSER2Q86WR7 435 aaPredicted RBP16.14■□□□□ 0.17
COL4A1-205ENST00000615732 RPRD2Q5VT52 1461 aaKnown RBP16.14■□□□□ 0.17
COL4A1-205ENST00000615732 PHLPP1O60346 1717 aa16.12■□□□□ 0.17
COL4A1-205ENST00000615732 POTEAQ6S8J7 498 aa16.12■□□□□ 0.17
COL4A1-205ENST00000615732 CHD2O14647 1828 aaKnown RBP16.12■□□□□ 0.17
COL4A1-205ENST00000615732 TMEM131LA2VDJ0 1609 aa16.12■□□□□ 0.17
COL4A1-205ENST00000615732 BCANQ96GW7 911 aa16.11■□□□□ 0.17
COL4A1-205ENST00000615732 SLC52A1Q9NWF4 448 aa16.11■□□□□ 0.17
COL4A1-205ENST00000615732 UNC13BO14795 1591 aa16.11■□□□□ 0.17
COL4A1-205ENST00000615732 MSH6P52701 1360 aa16.11■□□□□ 0.17
COL4A1-205ENST00000615732 PLEKHG1Q9ULL1 1385 aa16.11■□□□□ 0.17
COL4A1-205ENST00000615732 RIMS2Q9UQ26 1411 aa16.1■□□□□ 0.17
COL4A1-205ENST00000615732 SETD1AO15047 1707 aaKnown RBP16.08■□□□□ 0.17
COL4A1-205ENST00000615732 ITGAEP38570 1179 aa16.08■□□□□ 0.16
COL4A1-205ENST00000615732 COL16A1Q07092 1604 aaPredicted RBP16.08■□□□□ 0.16
COL4A1-205ENST00000615732 PPP1R15AO75807 674 aaPredicted RBP16.07■□□□□ 0.16
COL4A1-205ENST00000615732 CHGAP10645 457 aaKnown RBP16.07■□□□□ 0.16
COL4A1-205ENST00000615732 E9PCH4 1651 aa16.06■□□□□ 0.16
COL4A1-205ENST00000615732 NUTM2DQ5VT03 806 aaPredicted RBP16.05■□□□□ 0.16
COL4A1-205ENST00000615732 SLAIN2Q9P270 581 aa16.05■□□□□ 0.16
COL4A1-205ENST00000615732 ADAMTS13Q76LX8 1427 aa16.04■□□□□ 0.16
COL4A1-205ENST00000615732 ROCK1Q13464 1354 aa16.04■□□□□ 0.16
COL4A1-205ENST00000615732 JCADQ9P266 1359 aa16.04■□□□□ 0.16
COL4A1-205ENST00000615732 DIP2AQ14689 1571 aa16.04■□□□□ 0.16
COL4A1-205ENST00000615732 LRP6O75581 1613 aa16.03■□□□□ 0.16
COL4A1-205ENST00000615732 IQGAP3Q86VI3 1631 aa16.03■□□□□ 0.16
COL4A1-205ENST00000615732 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.02■□□□□ 0.15
COL4A1-205ENST00000615732 RRBP1Q9P2E9 1410 aaKnown RBP16.02■□□□□ 0.15
COL4A1-205ENST00000615732 NCOA3Q9Y6Q9 1424 aa16.02■□□□□ 0.15
COL4A1-205ENST00000615732 NUP155O75694 1391 aa16.01■□□□□ 0.15
COL4A1-205ENST00000615732 TBX22Q9Y458 520 aa16.01■□□□□ 0.15
COL4A1-205ENST00000615732 AHDC1Q5TGY3 1603 aaPredicted RBP16.01■□□□□ 0.15
COL4A1-205ENST00000615732 ZEB1P37275 1124 aaPredicted RBP16■□□□□ 0.15
COL4A1-205ENST00000615732 HDGFP51858 240 aaKnown RBP15.99■□□□□ 0.15
COL4A1-205ENST00000615732 SHPRHQ149N8 1683 aa15.99■□□□□ 0.15
COL4A1-205ENST00000615732 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.98■□□□□ 0.15
COL4A1-205ENST00000615732 TRPM2O94759 1503 aa15.98■□□□□ 0.15
COL4A1-205ENST00000615732 PIK3R4Q99570 1358 aa15.97■□□□□ 0.15
COL4A1-205ENST00000615732 PTPRUQ92729 1446 aa15.96■□□□□ 0.15
COL4A1-205ENST00000615732 C14orf37Q86TY3 774 aa15.96■□□□□ 0.15
COL4A1-205ENST00000615732 NRXN3Q9Y4C0 1643 aa15.96■□□□□ 0.15
COL4A1-205ENST00000615732 SPATA31A6Q5VVP1 1343 aa15.94■□□□□ 0.14
COL4A1-205ENST00000615732 XRN1Q8IZH2 1706 aaKnown RBP15.94■□□□□ 0.14
COL4A1-205ENST00000615732 CADPS2Q86UW7 1296 aa15.94■□□□□ 0.14
COL4A1-205ENST00000615732 C19orf44Q9H6X5 657 aa15.93■□□□□ 0.14
COL4A1-205ENST00000615732 ATF3P18847 181 aa15.92■□□□□ 0.14
COL4A1-205ENST00000615732 CCER1Q8TC90 406 aaPredicted RBP15.92■□□□□ 0.14
COL4A1-205ENST00000615732 SETBP1Q9Y6X0 1596 aa15.92■□□□□ 0.14
COL4A1-205ENST00000615732 SPHKAPQ2M3C7 1700 aa15.91■□□□□ 0.14
COL4A1-205ENST00000615732 ASXL1Q8IXJ9 1541 aa15.91■□□□□ 0.14
COL4A1-205ENST00000615732 MEX3CQ5U5Q3 659 aaKnown RBP15.91■□□□□ 0.14
COL4A1-205ENST00000615732 AMOTL2Q9Y2J4 779 aa15.91■□□□□ 0.14
COL4A1-205ENST00000615732 DCCP43146 1447 aa15.91■□□□□ 0.14
COL4A1-205ENST00000615732 BRINP3Q76B58 766 aa15.9■□□□□ 0.14
COL4A1-205ENST00000615732 NHSL1Q5SYE7 1610 aa15.9■□□□□ 0.14
COL4A1-205ENST00000615732 MST1RQ04912 1400 aa15.88■□□□□ 0.13
COL4A1-205ENST00000615732 CLTCL1P53675 1640 aa15.88■□□□□ 0.13
COL4A1-205ENST00000615732 ZNF326Q5BKZ1 582 aaKnown RBP15.88■□□□□ 0.13
COL4A1-205ENST00000615732 ZNF772Q68DY9 489 aaPredicted RBP15.88■□□□□ 0.13
COL4A1-205ENST00000615732 TRIM52Q96A61 297 aa15.87■□□□□ 0.13
COL4A1-205ENST00000615732 METP08581 1390 aa15.86■□□□□ 0.13
COL4A1-205ENST00000615732 NAIPQ13075 1403 aa15.85■□□□□ 0.13
COL4A1-205ENST00000615732 SETD5Q9C0A6 1442 aa15.85■□□□□ 0.13
COL4A1-205ENST00000615732 NALCNQ8IZF0 1738 aa15.85■□□□□ 0.13
COL4A1-205ENST00000615732 NEXMIFQ5QGS0 1516 aa15.85■□□□□ 0.13
COL4A1-205ENST00000615732 UPF1Q92900 1129 aaKnown RBP eCLIP15.85■□□□□ 0.13
COL4A1-205ENST00000615732 NUTM2BA6NNL0 878 aaPredicted RBP15.84■□□□□ 0.13
COL4A1-205ENST00000615732 NUTM2EB1AL46 878 aaPredicted RBP15.84■□□□□ 0.13
COL4A1-205ENST00000615732 NUTM2AQ8IVF1 878 aaPredicted RBP15.84■□□□□ 0.13
COL4A1-205ENST00000615732 ADGRL3Q9HAR2 1447 aa15.83■□□□□ 0.12
COL4A1-205ENST00000615732 CDK12Q9NYV4 1490 aaPredicted RBP15.83■□□□□ 0.12
COL4A1-205ENST00000615732 RXRBP28702 533 aa15.81■□□□□ 0.12
COL4A1-205ENST00000615732 AFF2P51816 1311 aa15.81■□□□□ 0.12
COL4A1-205ENST00000615732 DDX17Q92841 729 aaKnown RBP15.8■□□□□ 0.12
COL4A1-205ENST00000615732 PNPLA6Q8IY17 1366 aa15.79■□□□□ 0.12
COL4A1-205ENST00000615732 RGS12O14924 1447 aa15.78■□□□□ 0.12
COL4A1-205ENST00000615732 KIF1BO60333 1816 aa15.78■□□□□ 0.12
COL4A1-205ENST00000615732 HFM1A2PYH4 1435 aa15.77■□□□□ 0.12
COL4A1-205ENST00000615732 LAMC1P11047 1609 aa15.77■□□□□ 0.12
COL4A1-205ENST00000615732 LRRC59Q96AG4 307 aaKnown RBP15.76■□□□□ 0.11
COL4A1-205ENST00000615732 C1orf167Q5SNV9 1468 aa15.76■□□□□ 0.11
COL4A1-205ENST00000615732 PTCH1Q13635 1447 aa15.76■□□□□ 0.11
COL4A1-205ENST00000615732 C8orf37Q96NL8 207 aa15.75■□□□□ 0.11
COL4A1-205ENST00000615732 SLC4A1APQ9BWU0 796 aaKnown RBP15.73■□□□□ 0.11
COL4A1-205ENST00000615732 ROBO2Q9HCK4 1378 aa15.73■□□□□ 0.11
COL4A1-205ENST00000615732 PRAG1Q86YV5 1406 aa15.72■□□□□ 0.11
COL4A1-205ENST00000615732 FOXD1Q16676 465 aa15.72■□□□□ 0.11
COL4A1-205ENST00000615732 RBM6P78332 1123 aaKnown RBP15.7■□□□□ 0.1
COL4A1-205ENST00000615732 QTRT2Q9H974 415 aaKnown RBP15.7■□□□□ 0.1
COL4A1-205ENST00000615732 PPLO60437 1756 aa15.7■□□□□ 0.1
COL4A1-205ENST00000615732 COL22A1Q8NFW1 1626 aaPredicted RBP15.69■□□□□ 0.1
COL4A1-205ENST00000615732 ADAMTS2O95450 1211 aa15.69■□□□□ 0.1
COL4A1-205ENST00000615732 ORAI2Q96SN7 254 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms