RNA–Protein interactions for RNA: ENST00000615459.4

RSPO1-204, Transcript of R-spondin 1, humanhuman

TSL 2 BASIC

Gene RSPO1, Length 2,331 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1-204ENST00000615459 TMEM131LA2VDJ0 1609 aa22.48■■□□□ 1.19
RSPO1-204ENST00000615459 ZNF326Q5BKZ1 582 aaKnown RBP22.47■■□□□ 1.19
RSPO1-204ENST00000615459 MYO5BQ9ULV0 1848 aa22.46■■□□□ 1.19
RSPO1-204ENST00000615459 ARHGAP23Q9P227 1491 aa22.46■■□□□ 1.19
RSPO1-204ENST00000615459 SLIT1O75093 1534 aa22.46■■□□□ 1.19
RSPO1-204ENST00000615459 CCDC144AA2RUR9 1427 aa22.45■■□□□ 1.18
RSPO1-204ENST00000615459 NEURL4Q96JN8 1562 aa22.44■■□□□ 1.18
RSPO1-204ENST00000615459 SCAF11Q99590 1463 aaKnown RBP22.44■■□□□ 1.18
RSPO1-204ENST00000615459 KDM5AP29375 1690 aaKnown RBP22.43■■□□□ 1.18
RSPO1-204ENST00000615459 RIMS2Q9UQ26 1411 aa22.43■■□□□ 1.18
RSPO1-204ENST00000615459 PPP1R15AO75807 674 aaPredicted RBP22.42■■□□□ 1.18
RSPO1-204ENST00000615459 RGL3Q3MIN7 710 aa22.42■■□□□ 1.18
RSPO1-204ENST00000615459 NPHP4O75161 1426 aaPredicted RBP22.42■■□□□ 1.18
RSPO1-204ENST00000615459 ANKRD30BQ9BXX2 1392 aa22.41■■□□□ 1.18
RSPO1-204ENST00000615459 BCANQ96GW7 911 aa22.41■■□□□ 1.18
RSPO1-204ENST00000615459 POLR1AO95602 1720 aaPredicted RBP22.41■■□□□ 1.18
RSPO1-204ENST00000615459 ZFYVE9O95405 1425 aa22.4■■□□□ 1.18
RSPO1-204ENST00000615459 MED14O60244 1454 aa22.38■■□□□ 1.17
RSPO1-204ENST00000615459 SLC26A8Q96RN1 970 aa22.37■■□□□ 1.17
RSPO1-204ENST00000615459 DHX57Q6P158 1386 aaKnown RBP22.37■■□□□ 1.17
RSPO1-204ENST00000615459 ZNF335Q9H4Z2 1342 aaPredicted RBP22.37■■□□□ 1.17
RSPO1-204ENST00000615459 HDGFP51858 240 aaKnown RBP22.37■■□□□ 1.17
RSPO1-204ENST00000615459 KIF1BO60333 1816 aa22.36■■□□□ 1.17
RSPO1-204ENST00000615459 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.35■■□□□ 1.17
RSPO1-204ENST00000615459 IQGAP1P46940 1657 aa22.34■■□□□ 1.17
RSPO1-204ENST00000615459 SPATA31E1Q6ZUB1 1445 aa22.33■■□□□ 1.17
RSPO1-204ENST00000615459 CLSPNQ9HAW4 1339 aa22.32■■□□□ 1.16
RSPO1-204ENST00000615459 PLEKHG1Q9ULL1 1385 aa22.3■■□□□ 1.16
RSPO1-204ENST00000615459 NEXMIFQ5QGS0 1516 aa22.3■■□□□ 1.16
RSPO1-204ENST00000615459 SIN3AQ96ST3 1273 aa22.28■■□□□ 1.16
RSPO1-204ENST00000615459 RPGRIP1LQ68CZ1 1315 aa22.27■■□□□ 1.16
RSPO1-204ENST00000615459 VGFO15240 615 aaPredicted RBP22.26■■□□□ 1.15
RSPO1-204ENST00000615459 ADGRF5Q8IZF2 1346 aa22.25■■□□□ 1.15
RSPO1-204ENST00000615459 ADAMTS13Q76LX8 1427 aa22.23■■□□□ 1.15
RSPO1-204ENST00000615459 KDM2AQ9Y2K7 1162 aa22.22■■□□□ 1.15
RSPO1-204ENST00000615459 LTBP4Q8N2S1 1624 aa22.22■■□□□ 1.15
RSPO1-204ENST00000615459 TBX22Q9Y458 520 aa22.21■■□□□ 1.15
RSPO1-204ENST00000615459 CERKQ8TCT0 537 aa22.2■■□□□ 1.15
RSPO1-204ENST00000615459 DCAF11Q8TEB1 546 aa22.2■■□□□ 1.15
RSPO1-204ENST00000615459 PPLO60437 1756 aa22.19■■□□□ 1.14
RSPO1-204ENST00000615459 RBM33Q96EV2 1170 aaKnown RBP22.18■■□□□ 1.14
RSPO1-204ENST00000615459 NRXN3Q9Y4C0 1643 aa22.17■■□□□ 1.14
RSPO1-204ENST00000615459 METP08581 1390 aa22.16■■□□□ 1.14
RSPO1-204ENST00000615459 KCNA6P17658 529 aa22.16■■□□□ 1.14
RSPO1-204ENST00000615459 STRCP1A6NGW2 1772 aa22.16■■□□□ 1.14
RSPO1-204ENST00000615459 SETBP1Q9Y6X0 1596 aa22.16■■□□□ 1.14
RSPO1-204ENST00000615459 IFT172Q9UG01 1749 aa22.13■■□□□ 1.13
RSPO1-204ENST00000615459 AMOTL2Q9Y2J4 779 aa22.12■■□□□ 1.13
RSPO1-204ENST00000615459 PTPRUQ92729 1446 aa22.11■■□□□ 1.13
RSPO1-204ENST00000615459 L3MBTL2Q969R5 705 aa22.11■■□□□ 1.13
RSPO1-204ENST00000615459 CFAP70Q5T0N1 1121 aa22.1■■□□□ 1.13
RSPO1-204ENST00000615459 TMEM132EQ6IEE7 984 aa22.1■■□□□ 1.13
RSPO1-204ENST00000615459 PROSER2Q86WR7 435 aaPredicted RBP22.1■■□□□ 1.13
RSPO1-204ENST00000615459 PIK3C2GO75747 1445 aa22.1■■□□□ 1.13
RSPO1-204ENST00000615459 ALKQ9UM73 1620 aa22.1■■□□□ 1.13
RSPO1-204ENST00000615459 CPS1P31327 1500 aa22.09■■□□□ 1.13
RSPO1-204ENST00000615459 DIP2AQ14689 1571 aa22.09■■□□□ 1.13
RSPO1-204ENST00000615459 LRRC7Q96NW7 1537 aa22.09■■□□□ 1.13
RSPO1-204ENST00000615459 MYOM2P54296 1465 aa22.08■■□□□ 1.13
RSPO1-204ENST00000615459 PIK3R4Q99570 1358 aa22.06■■□□□ 1.12
RSPO1-204ENST00000615459 TMEM94Q12767 1356 aa22.06■■□□□ 1.12
RSPO1-204ENST00000615459 NRXN1Q9ULB1 1477 aa22.06■■□□□ 1.12
RSPO1-204ENST00000615459 C14orf93Q9H972 538 aaKnown RBP22.06■■□□□ 1.12
RSPO1-204ENST00000615459 STK26Q9P289 416 aa22.06■■□□□ 1.12
RSPO1-204ENST00000615459 CHD2O14647 1828 aaKnown RBP22.05■■□□□ 1.12
RSPO1-204ENST00000615459 NWD1Q149M9 1564 aa22.04■■□□□ 1.12
RSPO1-204ENST00000615459 SETD1AO15047 1707 aaKnown RBP22.03■■□□□ 1.12
RSPO1-204ENST00000615459 STAC3Q96MF2 364 aa22.01■■□□□ 1.11
RSPO1-204ENST00000615459 NKTRP30414 1462 aaKnown RBP22.01■■□□□ 1.11
RSPO1-204ENST00000615459 C14orf37Q86TY3 774 aa22■■□□□ 1.11
RSPO1-204ENST00000615459 TONSLQ96HA7 1378 aa22■■□□□ 1.11
RSPO1-204ENST00000615459 UBAP1LF5GYI3 381 aa22■■□□□ 1.11
RSPO1-204ENST00000615459 ASXL1Q8IXJ9 1541 aa21.99■■□□□ 1.11
RSPO1-204ENST00000615459 ROBO2Q9HCK4 1378 aa21.98■■□□□ 1.11
RSPO1-204ENST00000615459 XRN1Q8IZH2 1706 aaKnown RBP21.97■■□□□ 1.11
RSPO1-204ENST00000615459 MYT1Q01538 1121 aa21.96■■□□□ 1.11
RSPO1-204ENST00000615459 PRAG1Q86YV5 1406 aa21.96■■□□□ 1.11
RSPO1-204ENST00000615459 NBPF1Q3BBV0 1214 aa21.96■■□□□ 1.11
RSPO1-204ENST00000615459 FBXO41Q8TF61 875 aa21.96■■□□□ 1.11
RSPO1-204ENST00000615459 XIRP1Q702N8 1843 aaKnown RBP21.95■■□□□ 1.1
RSPO1-204ENST00000615459 IQSEC2Q5JU85 1478 aa21.95■■□□□ 1.1
RSPO1-204ENST00000615459 YTHDC2Q9H6S0 1430 aaKnown RBP21.95■■□□□ 1.1
RSPO1-204ENST00000615459 WAPLQ7Z5K2 1190 aa21.95■■□□□ 1.1
RSPO1-204ENST00000615459 PIP4K2BP78356 416 aa21.94■■□□□ 1.1
RSPO1-204ENST00000615459 ILDR1Q86SU0 546 aaPredicted RBP21.94■■□□□ 1.1
RSPO1-204ENST00000615459 LRPPRCP42704 1394 aaKnown RBP21.94■■□□□ 1.1
RSPO1-204ENST00000615459 TRAK1Q9UPV9 953 aa21.93■■□□□ 1.1
RSPO1-204ENST00000615459 NBPF8Q3BBV2 869 aa21.92■■□□□ 1.1
RSPO1-204ENST00000615459 SUPT16HQ9Y5B9 1047 aaKnown RBP21.92■■□□□ 1.1
RSPO1-204ENST00000615459 TOM1O60784 492 aa21.91■■□□□ 1.1
RSPO1-204ENST00000615459 ABCC11Q96J66 1382 aa21.91■■□□□ 1.1
RSPO1-204ENST00000615459 ADGRB1O14514 1584 aa21.91■■□□□ 1.1
RSPO1-204ENST00000615459 MSH6P52701 1360 aa21.91■■□□□ 1.1
RSPO1-204ENST00000615459 SAFB2Q14151 953 aaKnown RBP eCLIP21.9■■□□□ 1.1
RSPO1-204ENST00000615459 PLEKHH1Q9ULM0 1364 aa21.9■■□□□ 1.1
RSPO1-204ENST00000615459 LAMC1P11047 1609 aa21.9■■□□□ 1.1
RSPO1-204ENST00000615459 PTCH1Q13635 1447 aa21.9■■□□□ 1.1
RSPO1-204ENST00000615459 C19orf44Q9H6X5 657 aa21.89■■□□□ 1.1
RSPO1-204ENST00000615459 PRAM1Q96QH2 718 aa21.88■■□□□ 1.09
RSPO1-204ENST00000615459 TECPR2O15040 1411 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms