RNA–Protein interactions for RNA: ENST00000615442.1

PVT1-223, Transcript of Pvt1 oncogene, humanhuman

Gene PVT1, Length 165 nt, Biotype misc RNA, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-223ENST00000615442 RGL3Q3MIN7 710 aa15.27■□□□□ 0.04
PVT1-223ENST00000615442 ZFYVE9O95405 1425 aa15.26■□□□□ 0.03
PVT1-223ENST00000615442 CLSPNQ9HAW4 1339 aa15.26■□□□□ 0.03
PVT1-223ENST00000615442 SCAF11Q99590 1463 aaKnown RBP15.26■□□□□ 0.03
PVT1-223ENST00000615442 VGFO15240 615 aaPredicted RBP15.25■□□□□ 0.03
PVT1-223ENST00000615442 SIN3AQ96ST3 1273 aa15.25■□□□□ 0.03
PVT1-223ENST00000615442 KIF1BO60333 1816 aa15.24■□□□□ 0.03
PVT1-223ENST00000615442 PPP1R15AO75807 674 aaPredicted RBP15.24■□□□□ 0.03
PVT1-223ENST00000615442 CCER1Q8TC90 406 aaPredicted RBP15.24■□□□□ 0.03
PVT1-223ENST00000615442 STAC3Q96MF2 364 aa15.24■□□□□ 0.03
PVT1-223ENST00000615442 MED14O60244 1454 aa15.24■□□□□ 0.03
PVT1-223ENST00000615442 NEUROD1Q13562 356 aa15.23■□□□□ 0.03
PVT1-223ENST00000615442 NUTM2DQ5VT03 806 aaPredicted RBP15.22■□□□□ 0.03
PVT1-223ENST00000615442 NPHP4O75161 1426 aaPredicted RBP15.22■□□□□ 0.03
PVT1-223ENST00000615442 PLEKHG1Q9ULL1 1385 aa15.22■□□□□ 0.03
PVT1-223ENST00000615442 NEXMIFQ5QGS0 1516 aa15.21■□□□□ 0.03
PVT1-223ENST00000615442 STRCQ7RTU9 1775 aa15.21■□□□□ 0.02
PVT1-223ENST00000615442 DCAF11Q8TEB1 546 aa15.19■□□□□ 0.02
PVT1-223ENST00000615442 BCANQ96GW7 911 aa15.19■□□□□ 0.02
PVT1-223ENST00000615442 MYO5BQ9ULV0 1848 aa15.19■□□□□ 0.02
PVT1-223ENST00000615442 TBX22Q9Y458 520 aa15.17■□□□□ 0.02
PVT1-223ENST00000615442 POLR1AO95602 1720 aaPredicted RBP15.17■□□□□ 0.02
PVT1-223ENST00000615442 ADGRF5Q8IZF2 1346 aa15.17■□□□□ 0.02
PVT1-223ENST00000615442 L3MBTL2Q969R5 705 aa15.16■□□□□ 0.02
PVT1-223ENST00000615442 TIMELESSQ9UNS1 1208 aa15.16■□□□□ 0.02
PVT1-223ENST00000615442 KDM2AQ9Y2K7 1162 aa15.16■□□□□ 0.02
PVT1-223ENST00000615442 MYOM2P54296 1465 aa15.15■□□□□ 0.02
PVT1-223ENST00000615442 SLC26A8Q96RN1 970 aa15.15■□□□□ 0.02
PVT1-223ENST00000615442 TONSLQ96HA7 1378 aa15.14■□□□□ 0.01
PVT1-223ENST00000615442 IQGAP1P46940 1657 aa15.14■□□□□ 0.01
PVT1-223ENST00000615442 PPLO60437 1756 aa15.13■□□□□ 0.01
PVT1-223ENST00000615442 ADAMTS13Q76LX8 1427 aa15.13■□□□□ 0.01
PVT1-223ENST00000615442 NRXN1Q9ULB1 1477 aa15.13■□□□□ 0.01
PVT1-223ENST00000615442 SETBP1Q9Y6X0 1596 aa15.12■□□□□ 0.01
PVT1-223ENST00000615442 SENP3Q9H4L4 574 aaPredicted RBP15.12■□□□□ 0.01
PVT1-223ENST00000615442 PIK3C2GO75747 1445 aa15.11■□□□□ 0.01
PVT1-223ENST00000615442 C14orf93Q9H972 538 aaKnown RBP15.11■□□□□ 0.01
PVT1-223ENST00000615442 IFT172Q9UG01 1749 aa15.11■□□□□ 0.01
PVT1-223ENST00000615442 PIK3R4Q99570 1358 aa15.11■□□□□ 0.01
PVT1-223ENST00000615442 KCNA6P17658 529 aa15.09■□□□□ 0.01
PVT1-223ENST00000615442 DIP2AQ14689 1571 aa15.09■□□□□ 0.01
PVT1-223ENST00000615442 NRXN3Q9Y4C0 1643 aa15.07■□□□□ 0
PVT1-223ENST00000615442 CFAP70Q5T0N1 1121 aa15.07■□□□□ 0
PVT1-223ENST00000615442 ZNF335Q9H4Z2 1342 aaPredicted RBP15.07■□□□□ 0
PVT1-223ENST00000615442 METP08581 1390 aa15.07■□□□□ 0
PVT1-223ENST00000615442 ALKQ9UM73 1620 aa15.06■□□□□ 0
PVT1-223ENST00000615442 PRAG1Q86YV5 1406 aa15.06■□□□□ 0
PVT1-223ENST00000615442 AMOTL2Q9Y2J4 779 aa15.05■□□□□ -0
PVT1-223ENST00000615442 NBPF8Q3BBV2 869 aa15.02■□□□□ -0
PVT1-223ENST00000615442 TMEM132EQ6IEE7 984 aa15.02■□□□□ -0
PVT1-223ENST00000615442 PTPRUQ92729 1446 aa15.01□□□□□ -0.01
PVT1-223ENST00000615442 LAMC1P11047 1609 aa15.01□□□□□ -0.01
PVT1-223ENST00000615442 CPS1P31327 1500 aa15.01□□□□□ -0.01
PVT1-223ENST00000615442 LRPPRCP42704 1394 aaKnown RBP15□□□□□ -0.01
PVT1-223ENST00000615442 ABCC11Q96J66 1382 aa15□□□□□ -0.01
PVT1-223ENST00000615442 LTBP4Q8N2S1 1624 aa15□□□□□ -0.01
PVT1-223ENST00000615442 SIRT1Q96EB6 747 aa15□□□□□ -0.01
PVT1-223ENST00000615442 NWD1Q149M9 1564 aa14.99□□□□□ -0.01
PVT1-223ENST00000615442 NBPF1Q3BBV0 1214 aa14.99□□□□□ -0.01
PVT1-223ENST00000615442 PROSER2Q86WR7 435 aaPredicted RBP14.99□□□□□ -0.01
PVT1-223ENST00000615442 SETD1AO15047 1707 aaKnown RBP14.99□□□□□ -0.01
PVT1-223ENST00000615442 NKTRP30414 1462 aaKnown RBP14.99□□□□□ -0.01
PVT1-223ENST00000615442 YTHDC2Q9H6S0 1430 aaKnown RBP14.99□□□□□ -0.01
PVT1-223ENST00000615442 STK26Q9P289 416 aa14.98□□□□□ -0.01
PVT1-223ENST00000615442 ADGRB1O14514 1584 aa14.98□□□□□ -0.01
PVT1-223ENST00000615442 CHD2O14647 1828 aaKnown RBP14.97□□□□□ -0.01
PVT1-223ENST00000615442 TECPR2O15040 1411 aa14.97□□□□□ -0.01
PVT1-223ENST00000615442 KIAA1210Q9ULL0 1709 aa14.97□□□□□ -0.01
PVT1-223ENST00000615442 ASXL1Q8IXJ9 1541 aa14.97□□□□□ -0.01
PVT1-223ENST00000615442 CERKQ8TCT0 537 aa14.96□□□□□ -0.01
PVT1-223ENST00000615442 NCOA3Q9Y6Q9 1424 aa14.96□□□□□ -0.01
PVT1-223ENST00000615442 LRRC7Q96NW7 1537 aa14.96□□□□□ -0.02
PVT1-223ENST00000615442 PTCH1Q13635 1447 aa14.95□□□□□ -0.02
PVT1-223ENST00000615442 ROCK2O75116 1388 aaKnown RBP14.95□□□□□ -0.02
PVT1-223ENST00000615442 TMEM94Q12767 1356 aa14.95□□□□□ -0.02
PVT1-223ENST00000615442 XRN1Q8IZH2 1706 aaKnown RBP14.95□□□□□ -0.02
PVT1-223ENST00000615442 STRCP1A6NGW2 1772 aa14.94□□□□□ -0.02
PVT1-223ENST00000615442 TRAK1Q9UPV9 953 aa14.94□□□□□ -0.02
PVT1-223ENST00000615442 GPRASP1Q5JY77 1395 aa14.94□□□□□ -0.02
PVT1-223ENST00000615442 ROBO2Q9HCK4 1378 aa14.94□□□□□ -0.02
PVT1-223ENST00000615442 FAM135BQ49AJ0 1406 aa14.93□□□□□ -0.02
PVT1-223ENST00000615442 RALGAPBQ86X10 1494 aa14.93□□□□□ -0.02
PVT1-223ENST00000615442 TRPM1Q7Z4N2 1603 aa14.92□□□□□ -0.02
PVT1-223ENST00000615442 CARD11Q9BXL7 1154 aa14.92□□□□□ -0.02
PVT1-223ENST00000615442 IQSEC2Q5JU85 1478 aa14.92□□□□□ -0.02
PVT1-223ENST00000615442 DLC1Q96QB1 1528 aa14.92□□□□□ -0.02
PVT1-223ENST00000615442 WAPLQ7Z5K2 1190 aa14.91□□□□□ -0.02
PVT1-223ENST00000615442 RBM33Q96EV2 1170 aaKnown RBP14.91□□□□□ -0.02
PVT1-223ENST00000615442 PRAM1Q96QH2 718 aa14.91□□□□□ -0.02
PVT1-223ENST00000615442 POGKQ9P215 609 aa14.91□□□□□ -0.02
PVT1-223ENST00000615442 C14orf37Q86TY3 774 aa14.9□□□□□ -0.02
PVT1-223ENST00000615442 C19orf44Q9H6X5 657 aa14.9□□□□□ -0.02
PVT1-223ENST00000615442 KNDC1Q76NI1 1749 aa14.89□□□□□ -0.03
PVT1-223ENST00000615442 MSH6P52701 1360 aa14.87□□□□□ -0.03
PVT1-223ENST00000615442 PLEKHH1Q9ULM0 1364 aa14.87□□□□□ -0.03
PVT1-223ENST00000615442 ZEB1P37275 1124 aaPredicted RBP14.87□□□□□ -0.03
PVT1-223ENST00000615442 EIF3AQ14152 1382 aaKnown RBP14.86□□□□□ -0.03
PVT1-223ENST00000615442 ADGRL3Q9HAR2 1447 aa14.85□□□□□ -0.03
PVT1-223ENST00000615442 TOM1O60784 492 aa14.85□□□□□ -0.03
PVT1-223ENST00000615442 ATF3P18847 181 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms