RNA–Protein interactions for RNA: ENST00000615317.4

MMP28-205, Transcript of matrix metallopeptidase 28, humanhuman

TSL 2

Gene MMP28, Length 436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-205ENST00000615317 SETD1AO15047 1707 aaKnown RBP13.22□□□□□ -0.29
MMP28-205ENST00000615317 LAMC1P11047 1609 aa13.22□□□□□ -0.29
MMP28-205ENST00000615317 RIMS2Q9UQ26 1411 aa13.22□□□□□ -0.29
MMP28-205ENST00000615317 TRPM1Q7Z4N2 1603 aa13.21□□□□□ -0.3
MMP28-205ENST00000615317 ZNF326Q5BKZ1 582 aaKnown RBP13.2□□□□□ -0.3
MMP28-205ENST00000615317 STRCQ7RTU9 1775 aa13.2□□□□□ -0.3
MMP28-205ENST00000615317 TMEM2Q9UHN6 1383 aa13.2□□□□□ -0.3
MMP28-205ENST00000615317 SCAF11Q99590 1463 aaKnown RBP13.19□□□□□ -0.3
MMP28-205ENST00000615317 RGL3Q3MIN7 710 aa13.19□□□□□ -0.3
MMP28-205ENST00000615317 SETBP1Q9Y6X0 1596 aa13.18□□□□□ -0.3
MMP28-205ENST00000615317 KIAA1210Q9ULL0 1709 aa13.18□□□□□ -0.3
MMP28-205ENST00000615317 NRXN1Q9ULB1 1477 aa13.17□□□□□ -0.3
MMP28-205ENST00000615317 PIK3C2GO75747 1445 aa13.16□□□□□ -0.3
MMP28-205ENST00000615317 NUTM2DQ5VT03 806 aaPredicted RBP13.16□□□□□ -0.3
MMP28-205ENST00000615317 ASXL1Q8IXJ9 1541 aa13.16□□□□□ -0.3
MMP28-205ENST00000615317 PRAG1Q86YV5 1406 aa13.15□□□□□ -0.3
MMP28-205ENST00000615317 HSPA2P54652 639 aa13.15□□□□□ -0.3
MMP28-205ENST00000615317 L3MBTL2Q969R5 705 aa13.15□□□□□ -0.3
MMP28-205ENST00000615317 DIP2AQ14689 1571 aa13.15□□□□□ -0.3
MMP28-205ENST00000615317 RALGAPBQ86X10 1494 aa13.13□□□□□ -0.31
MMP28-205ENST00000615317 PPP1R15AO75807 674 aaPredicted RBP13.13□□□□□ -0.31
MMP28-205ENST00000615317 DCAF11Q8TEB1 546 aa13.13□□□□□ -0.31
MMP28-205ENST00000615317 SENP3Q9H4L4 574 aaPredicted RBP13.13□□□□□ -0.31
MMP28-205ENST00000615317 ALKQ9UM73 1620 aa13.13□□□□□ -0.31
MMP28-205ENST00000615317 THEMISQ8N1K5 641 aaPredicted RBP13.12□□□□□ -0.31
MMP28-205ENST00000615317 KDM2AQ9Y2K7 1162 aa13.12□□□□□ -0.31
MMP28-205ENST00000615317 KNDC1Q76NI1 1749 aa13.12□□□□□ -0.31
MMP28-205ENST00000615317 RPGRIP1LQ68CZ1 1315 aa13.12□□□□□ -0.31
MMP28-205ENST00000615317 ADGRF5Q8IZF2 1346 aa13.12□□□□□ -0.31
MMP28-205ENST00000615317 PLEKHG1Q9ULL1 1385 aa13.11□□□□□ -0.31
MMP28-205ENST00000615317 NPHP4O75161 1426 aaPredicted RBP13.11□□□□□ -0.31
MMP28-205ENST00000615317 ARHGEF28Q8N1W1 1705 aaKnown RBP13.1□□□□□ -0.31
MMP28-205ENST00000615317 MED14O60244 1454 aa13.1□□□□□ -0.31
MMP28-205ENST00000615317 ADGRB1O14514 1584 aa13.1□□□□□ -0.31
MMP28-205ENST00000615317 LTKP29376 864 aa13.09□□□□□ -0.31
MMP28-205ENST00000615317 AEBP2Q6ZN18 517 aaPredicted RBP13.09□□□□□ -0.31
MMP28-205ENST00000615317 ADAMTS13Q76LX8 1427 aa13.09□□□□□ -0.31
MMP28-205ENST00000615317 XRN1Q8IZH2 1706 aaKnown RBP13.09□□□□□ -0.31
MMP28-205ENST00000615317 TXNDC2Q86VQ3 553 aa13.08□□□□□ -0.32
MMP28-205ENST00000615317 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.08□□□□□ -0.32
MMP28-205ENST00000615317 EID1Q9Y6B2 187 aa13.08□□□□□ -0.32
MMP28-205ENST00000615317 NCKAP5LQ9HCH0 1330 aa13.08□□□□□ -0.32
MMP28-205ENST00000615317 NWD1Q149M9 1564 aa13.07□□□□□ -0.32
MMP28-205ENST00000615317 STRCP1A6NGW2 1772 aa13.07□□□□□ -0.32
MMP28-205ENST00000615317 CHD2O14647 1828 aaKnown RBP13.06□□□□□ -0.32
MMP28-205ENST00000615317 TIMELESSQ9UNS1 1208 aa13.06□□□□□ -0.32
MMP28-205ENST00000615317 CPS1P31327 1500 aa13.05□□□□□ -0.32
MMP28-205ENST00000615317 VGFO15240 615 aaPredicted RBP13.05□□□□□ -0.32
MMP28-205ENST00000615317 NBPF8Q3BBV2 869 aa13.05□□□□□ -0.32
MMP28-205ENST00000615317 ANKLE2Q86XL3 938 aa13.05□□□□□ -0.32
MMP28-205ENST00000615317 BCANQ96GW7 911 aa13.05□□□□□ -0.32
MMP28-205ENST00000615317 QRICH2Q9H0J4 1663 aa13.05□□□□□ -0.32
MMP28-205ENST00000615317 ROCK2O75116 1388 aaKnown RBP13.04□□□□□ -0.32
MMP28-205ENST00000615317 HDGFP51858 240 aaKnown RBP13.03□□□□□ -0.32
MMP28-205ENST00000615317 ZEB1P37275 1124 aaPredicted RBP13.02□□□□□ -0.33
MMP28-205ENST00000615317 CFAP70Q5T0N1 1121 aa13.01□□□□□ -0.33
MMP28-205ENST00000615317 SLC26A8Q96RN1 970 aa13.01□□□□□ -0.33
MMP28-205ENST00000615317 METP08581 1390 aa13.01□□□□□ -0.33
MMP28-205ENST00000615317 GPRASP1Q5JY77 1395 aa13.01□□□□□ -0.33
MMP28-205ENST00000615317 NALCNQ8IZF0 1738 aa13□□□□□ -0.33
MMP28-205ENST00000615317 STAC3Q96MF2 364 aa13□□□□□ -0.33
MMP28-205ENST00000615317 PTPRUQ92729 1446 aa12.99□□□□□ -0.33
MMP28-205ENST00000615317 YTHDC2Q9H6S0 1430 aaKnown RBP12.99□□□□□ -0.33
MMP28-205ENST00000615317 XIRP1Q702N8 1843 aaKnown RBP12.99□□□□□ -0.33
MMP28-205ENST00000615317 DLC1Q96QB1 1528 aa12.98□□□□□ -0.33
MMP28-205ENST00000615317 NKTRP30414 1462 aaKnown RBP12.98□□□□□ -0.33
MMP28-205ENST00000615317 C14orf93Q9H972 538 aaKnown RBP12.98□□□□□ -0.33
MMP28-205ENST00000615317 PTCH1Q13635 1447 aa12.97□□□□□ -0.33
MMP28-205ENST00000615317 NBPF1Q3BBV0 1214 aa12.97□□□□□ -0.33
MMP28-205ENST00000615317 TMEM132EQ6IEE7 984 aa12.97□□□□□ -0.33
MMP28-205ENST00000615317 TECPR2O15040 1411 aa12.96□□□□□ -0.33
MMP28-205ENST00000615317 USP47Q96K76 1375 aa12.96□□□□□ -0.33
MMP28-205ENST00000615317 LRPPRCP42704 1394 aaKnown RBP12.95□□□□□ -0.34
MMP28-205ENST00000615317 PIK3R4Q99570 1358 aa12.95□□□□□ -0.34
MMP28-205ENST00000615317 CARD11Q9BXL7 1154 aa12.95□□□□□ -0.34
MMP28-205ENST00000615317 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.94□□□□□ -0.34
MMP28-205ENST00000615317 ADGRB2O60241 1585 aa12.94□□□□□ -0.34
MMP28-205ENST00000615317 EIF3AQ14152 1382 aaKnown RBP12.94□□□□□ -0.34
MMP28-205ENST00000615317 STK26Q9P289 416 aa12.93□□□□□ -0.34
MMP28-205ENST00000615317 TBX22Q9Y458 520 aa12.93□□□□□ -0.34
MMP28-205ENST00000615317 ROBO2Q9HCK4 1378 aa12.93□□□□□ -0.34
MMP28-205ENST00000615317 PLEKHH1Q9ULM0 1364 aa12.92□□□□□ -0.34
MMP28-205ENST00000615317 ZNF335Q9H4Z2 1342 aaPredicted RBP12.91□□□□□ -0.34
MMP28-205ENST00000615317 TRAK1Q9UPV9 953 aa12.91□□□□□ -0.34
MMP28-205ENST00000615317 TULP4Q9NRJ4 1543 aa12.91□□□□□ -0.34
MMP28-205ENST00000615317 LTBP4Q8N2S1 1624 aa12.91□□□□□ -0.34
MMP28-205ENST00000615317 CDC42BPGQ6DT37 1551 aa12.9□□□□□ -0.34
MMP28-205ENST00000615317 FMN2Q9NZ56 1722 aa12.9□□□□□ -0.34
MMP28-205ENST00000615317 FAM135BQ49AJ0 1406 aa12.89□□□□□ -0.35
MMP28-205ENST00000615317 KCNA6P17658 529 aa12.89□□□□□ -0.35
MMP28-205ENST00000615317 DMRT2Q9Y5R5 561 aa12.89□□□□□ -0.35
MMP28-205ENST00000615317 ABCC11Q96J66 1382 aa12.89□□□□□ -0.35
MMP28-205ENST00000615317 LRRC7Q96NW7 1537 aa12.88□□□□□ -0.35
MMP28-205ENST00000615317 AMOTL2Q9Y2J4 779 aa12.88□□□□□ -0.35
MMP28-205ENST00000615317 MYOM1P52179 1685 aa12.88□□□□□ -0.35
MMP28-205ENST00000615317 TOPAZ1Q8N9V7 1692 aa12.88□□□□□ -0.35
MMP28-205ENST00000615317 ITSN1Q15811 1721 aa12.88□□□□□ -0.35
MMP28-205ENST00000615317 PRAM1Q96QH2 718 aa12.87□□□□□ -0.35
MMP28-205ENST00000615317 ADGRL3Q9HAR2 1447 aa12.87□□□□□ -0.35
MMP28-205ENST00000615317 CENPJQ9HC77 1338 aaPredicted RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms