RNA–Protein interactions for RNA: ENST00000615229.4

ACACA-236, Transcript of acetyl-CoA carboxylase alpha, humanhuman

TSL 1 (best)

Gene ACACA, Length 1,468 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACACA-236ENST00000615229 IQGAP1P46940 1657 aa31.64■■■□□ 2.66
ACACA-236ENST00000615229 LTKP29376 864 aa31.63■■■□□ 2.65
ACACA-236ENST00000615229 ZNF326Q5BKZ1 582 aaKnown RBP31.6■■■□□ 2.65
ACACA-236ENST00000615229 ANKLE2Q86XL3 938 aa31.59■■■□□ 2.65
ACACA-236ENST00000615229 MED14O60244 1454 aa31.58■■■□□ 2.65
ACACA-236ENST00000615229 NUTM2DQ5VT03 806 aaPredicted RBP31.58■■■□□ 2.65
ACACA-236ENST00000615229 TXNDC2Q86VQ3 553 aa31.58■■■□□ 2.65
ACACA-236ENST00000615229 RGL3Q3MIN7 710 aa31.56■■■□□ 2.64
ACACA-236ENST00000615229 SIN3AQ96ST3 1273 aa31.55■■■□□ 2.64
ACACA-236ENST00000615229 NPHP4O75161 1426 aaPredicted RBP31.55■■■□□ 2.64
ACACA-236ENST00000615229 EID1Q9Y6B2 187 aa31.54■■■□□ 2.64
ACACA-236ENST00000615229 NRXN3Q9Y4C0 1643 aa31.53■■■□□ 2.64
ACACA-236ENST00000615229 SENP3Q9H4L4 574 aaPredicted RBP31.5■■■□□ 2.63
ACACA-236ENST00000615229 PPP1R15AO75807 674 aaPredicted RBP31.48■■■□□ 2.63
ACACA-236ENST00000615229 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.47■■■□□ 2.63
ACACA-236ENST00000615229 PLEKHG1Q9ULL1 1385 aa31.47■■■□□ 2.63
ACACA-236ENST00000615229 RPGRIP1LQ68CZ1 1315 aa31.47■■■□□ 2.63
ACACA-236ENST00000615229 SETBP1Q9Y6X0 1596 aa31.45■■■□□ 2.63
ACACA-236ENST00000615229 SETD1AO15047 1707 aaKnown RBP31.45■■■□□ 2.63
ACACA-236ENST00000615229 NEUROD1Q13562 356 aa31.45■■■□□ 2.62
ACACA-236ENST00000615229 HDGFP51858 240 aaKnown RBP31.43■■■□□ 2.62
ACACA-236ENST00000615229 MYOM2P54296 1465 aa31.42■■■□□ 2.62
ACACA-236ENST00000615229 STRCP1A6NGW2 1772 aa31.41■■■□□ 2.62
ACACA-236ENST00000615229 DMRT2Q9Y5R5 561 aa31.4■■■□□ 2.62
ACACA-236ENST00000615229 ADAMTS13Q76LX8 1427 aa31.4■■■□□ 2.62
ACACA-236ENST00000615229 ADGRF5Q8IZF2 1346 aa31.39■■■□□ 2.62
ACACA-236ENST00000615229 CCER1Q8TC90 406 aaPredicted RBP31.39■■■□□ 2.62
ACACA-236ENST00000615229 DIP2AQ14689 1571 aa31.38■■■□□ 2.61
ACACA-236ENST00000615229 NRXN1Q9ULB1 1477 aa31.37■■■□□ 2.61
ACACA-236ENST00000615229 VGFO15240 615 aaPredicted RBP31.36■■■□□ 2.61
ACACA-236ENST00000615229 CHD2O14647 1828 aaKnown RBP31.35■■■□□ 2.61
ACACA-236ENST00000615229 BCANQ96GW7 911 aa31.35■■■□□ 2.61
ACACA-236ENST00000615229 SLC26A8Q96RN1 970 aa31.35■■■□□ 2.61
ACACA-236ENST00000615229 ALKQ9UM73 1620 aa31.34■■■□□ 2.61
ACACA-236ENST00000615229 DCAF11Q8TEB1 546 aa31.33■■■□□ 2.61
ACACA-236ENST00000615229 PIK3C2GO75747 1445 aa31.33■■■□□ 2.61
ACACA-236ENST00000615229 CLSPNQ9HAW4 1339 aa31.33■■■□□ 2.61
ACACA-236ENST00000615229 KDM2AQ9Y2K7 1162 aa31.31■■■□□ 2.6
ACACA-236ENST00000615229 L3MBTL2Q969R5 705 aa31.3■■■□□ 2.6
ACACA-236ENST00000615229 LAMC1P11047 1609 aa31.29■■■□□ 2.6
ACACA-236ENST00000615229 ZNF335Q9H4Z2 1342 aaPredicted RBP31.28■■■□□ 2.6
ACACA-236ENST00000615229 NWD1Q149M9 1564 aa31.27■■■□□ 2.6
ACACA-236ENST00000615229 ASXL1Q8IXJ9 1541 aa31.26■■■□□ 2.6
ACACA-236ENST00000615229 LTBP4Q8N2S1 1624 aa31.26■■■□□ 2.59
ACACA-236ENST00000615229 TONSLQ96HA7 1378 aa31.25■■■□□ 2.59
ACACA-236ENST00000615229 TBX22Q9Y458 520 aa31.24■■■□□ 2.59
ACACA-236ENST00000615229 XRN1Q8IZH2 1706 aaKnown RBP31.23■■■□□ 2.59
ACACA-236ENST00000615229 METP08581 1390 aa31.22■■■□□ 2.59
ACACA-236ENST00000615229 KIAA1210Q9ULL0 1709 aa31.22■■■□□ 2.59
ACACA-236ENST00000615229 PRAG1Q86YV5 1406 aa31.22■■■□□ 2.59
ACACA-236ENST00000615229 PTPRUQ92729 1446 aa31.21■■■□□ 2.59
ACACA-236ENST00000615229 XIRP1Q702N8 1843 aaKnown RBP31.19■■■□□ 2.58
ACACA-236ENST00000615229 TRPM1Q7Z4N2 1603 aa31.18■■■□□ 2.58
ACACA-236ENST00000615229 STAC3Q96MF2 364 aa31.17■■■□□ 2.58
ACACA-236ENST00000615229 CFAP70Q5T0N1 1121 aa31.16■■■□□ 2.58
ACACA-236ENST00000615229 PIK3R4Q99570 1358 aa31.16■■■□□ 2.58
ACACA-236ENST00000615229 KNDC1Q76NI1 1749 aa31.15■■■□□ 2.58
ACACA-236ENST00000615229 ADGRB1O14514 1584 aa31.14■■■□□ 2.58
ACACA-236ENST00000615229 C14orf93Q9H972 538 aaKnown RBP31.14■■■□□ 2.57
ACACA-236ENST00000615229 CPS1P31327 1500 aa31.13■■■□□ 2.57
ACACA-236ENST00000615229 KCNA6P17658 529 aa31.11■■■□□ 2.57
ACACA-236ENST00000615229 NKTRP30414 1462 aaKnown RBP31.11■■■□□ 2.57
ACACA-236ENST00000615229 TMEM132EQ6IEE7 984 aa31.09■■■□□ 2.57
ACACA-236ENST00000615229 LRRC7Q96NW7 1537 aa31.08■■■□□ 2.57
ACACA-236ENST00000615229 NBPF8Q3BBV2 869 aa31.07■■■□□ 2.56
ACACA-236ENST00000615229 AMOTL2Q9Y2J4 779 aa31.07■■■□□ 2.56
ACACA-236ENST00000615229 YTHDC2Q9H6S0 1430 aaKnown RBP31.04■■■□□ 2.56
ACACA-236ENST00000615229 ARHGEF28Q8N1W1 1705 aaKnown RBP31.03■■■□□ 2.56
ACACA-236ENST00000615229 LRPPRCP42704 1394 aaKnown RBP31.02■■■□□ 2.56
ACACA-236ENST00000615229 PTCH1Q13635 1447 aa31■■■□□ 2.55
ACACA-236ENST00000615229 NBPF1Q3BBV0 1214 aa31■■■□□ 2.55
ACACA-236ENST00000615229 TECPR2O15040 1411 aa30.99■■■□□ 2.55
ACACA-236ENST00000615229 RBM33Q96EV2 1170 aaKnown RBP30.99■■■□□ 2.55
ACACA-236ENST00000615229 STK26Q9P289 416 aa30.99■■■□□ 2.55
ACACA-236ENST00000615229 TIMELESSQ9UNS1 1208 aa30.99■■■□□ 2.55
ACACA-236ENST00000615229 ROBO2Q9HCK4 1378 aa30.99■■■□□ 2.55
ACACA-236ENST00000615229 NALCNQ8IZF0 1738 aa30.99■■■□□ 2.55
ACACA-236ENST00000615229 RALGAPBQ86X10 1494 aa30.98■■■□□ 2.55
ACACA-236ENST00000615229 TMEM94Q12767 1356 aa30.96■■■□□ 2.55
ACACA-236ENST00000615229 PROSER2Q86WR7 435 aaPredicted RBP30.95■■■□□ 2.55
ACACA-236ENST00000615229 ABCC11Q96J66 1382 aa30.95■■■□□ 2.54
ACACA-236ENST00000615229 DLC1Q96QB1 1528 aa30.94■■■□□ 2.54
ACACA-236ENST00000615229 CERKQ8TCT0 537 aa30.93■■■□□ 2.54
ACACA-236ENST00000615229 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.92■■■□□ 2.54
ACACA-236ENST00000615229 ROCK2O75116 1388 aaKnown RBP30.92■■■□□ 2.54
ACACA-236ENST00000615229 IQSEC2Q5JU85 1478 aa30.9■■■□□ 2.54
ACACA-236ENST00000615229 PLEKHH1Q9ULM0 1364 aa30.89■■■□□ 2.54
ACACA-236ENST00000615229 TRAK1Q9UPV9 953 aa30.89■■■□□ 2.53
ACACA-236ENST00000615229 GPRASP1Q5JY77 1395 aa30.88■■■□□ 2.53
ACACA-236ENST00000615229 FAM135BQ49AJ0 1406 aa30.85■■■□□ 2.53
ACACA-236ENST00000615229 WAPLQ7Z5K2 1190 aa30.85■■■□□ 2.53
ACACA-236ENST00000615229 QRICH2Q9H0J4 1663 aa30.84■■■□□ 2.53
ACACA-236ENST00000615229 ADGRL3Q9HAR2 1447 aa30.82■■■□□ 2.52
ACACA-236ENST00000615229 NCOA3Q9Y6Q9 1424 aa30.82■■■□□ 2.52
ACACA-236ENST00000615229 PRAM1Q96QH2 718 aa30.81■■■□□ 2.52
ACACA-236ENST00000615229 SIRT1Q96EB6 747 aa30.78■■■□□ 2.52
ACACA-236ENST00000615229 SAFB2Q14151 953 aaKnown RBP eCLIP30.77■■■□□ 2.52
ACACA-236ENST00000615229 C14orf37Q86TY3 774 aa30.77■■■□□ 2.52
ACACA-236ENST00000615229 CARD11Q9BXL7 1154 aa30.77■■■□□ 2.52
ACACA-236ENST00000615229 MSH6P52701 1360 aa30.77■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms