RNA–Protein interactions for RNA: ENST00000615096.4

SCUBE1-208, Transcript of signal peptide, CUB domain and EGF like domain containing 1, human

TSL 2 BASIC

Gene SCUBE1, Length 1,119 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCUBE1-208	ENST00000615096	RPGRIP1L	Q68CZ1	1315 aa		32.26	■■■□□ 2.76
SCUBE1-208	ENST00000615096	NEXMIF	Q5QGS0	1516 aa		32.26	■■■□□ 2.76
SCUBE1-208	ENST00000615096	TXNDC2	Q86VQ3	553 aa		32.25	■■■□□ 2.75
SCUBE1-208	ENST00000615096	NCKAP5L	Q9HCH0	1330 aa		32.25	■■■□□ 2.75
SCUBE1-208	ENST00000615096	STRC	Q7RTU9	1775 aa		32.24	■■■□□ 2.75
SCUBE1-208	ENST00000615096	SCAF11	Q99590	1463 aa	Known RBP	32.24	■■■□□ 2.75
SCUBE1-208	ENST00000615096	NEUROD1	Q13562	356 aa		32.24	■■■□□ 2.75
SCUBE1-208	ENST00000615096	EID1	Q9Y6B2	187 aa		32.24	■■■□□ 2.75
SCUBE1-208	ENST00000615096	HDGF	P51858	240 aa	Known RBP	32.23	■■■□□ 2.75
SCUBE1-208	ENST00000615096	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	32.23	■■■□□ 2.75
SCUBE1-208	ENST00000615096	POLR1A	O95602	1720 aa	Predicted RBP	32.21	■■■□□ 2.75
SCUBE1-208	ENST00000615096	MED14	O60244	1454 aa		32.19	■■■□□ 2.74
SCUBE1-208	ENST00000615096	NUTM2D	Q5VT03	806 aa	Predicted RBP	32.19	■■■□□ 2.74
SCUBE1-208	ENST00000615096	PPL	O60437	1756 aa		32.19	■■■□□ 2.74
SCUBE1-208	ENST00000615096	IFT172	Q9UG01	1749 aa		32.18	■■■□□ 2.74
SCUBE1-208	ENST00000615096	VGF	O15240	615 aa	Predicted RBP	32.14	■■■□□ 2.74
SCUBE1-208	ENST00000615096	PPP1R15A	O75807	674 aa	Predicted RBP	32.14	■■■□□ 2.74
SCUBE1-208	ENST00000615096	PLEKHG1	Q9ULL1	1385 aa		32.14	■■■□□ 2.74
SCUBE1-208	ENST00000615096	NPHP4	O75161	1426 aa	Predicted RBP	32.14	■■■□□ 2.74
SCUBE1-208	ENST00000615096	MYOM2	P54296	1465 aa		32.1	■■■□□ 2.73
SCUBE1-208	ENST00000615096	DCAF11	Q8TEB1	546 aa		32.1	■■■□□ 2.73
SCUBE1-208	ENST00000615096	L3MBTL2	Q969R5	705 aa		32.1	■■■□□ 2.73
SCUBE1-208	ENST00000615096	ADGRF5	Q8IZF2	1346 aa		32.09	■■■□□ 2.73
SCUBE1-208	ENST00000615096	IQGAP1	P46940	1657 aa		32.08	■■■□□ 2.73
SCUBE1-208	ENST00000615096	STAC3	Q96MF2	364 aa		32.08	■■■□□ 2.73
SCUBE1-208	ENST00000615096	DMRT2	Q9Y5R5	561 aa		32.07	■■■□□ 2.72
SCUBE1-208	ENST00000615096	NRXN1	Q9ULB1	1477 aa		32.06	■■■□□ 2.72
SCUBE1-208	ENST00000615096	TONSL	Q96HA7	1378 aa		32.06	■■■□□ 2.72
SCUBE1-208	ENST00000615096	KDM2A	Q9Y2K7	1162 aa		32.05	■■■□□ 2.72
SCUBE1-208	ENST00000615096	SETBP1	Q9Y6X0	1596 aa		32.04	■■■□□ 2.72
SCUBE1-208	ENST00000615096	SENP3	Q9H4L4	574 aa	Predicted RBP	32.03	■■■□□ 2.72
SCUBE1-208	ENST00000615096	NRXN3	Q9Y4C0	1643 aa		32.03	■■■□□ 2.72
SCUBE1-208	ENST00000615096	ADAMTS13	Q76LX8	1427 aa		32.02	■■■□□ 2.72
SCUBE1-208	ENST00000615096	PIK3C2G	O75747	1445 aa		32.01	■■■□□ 2.72
SCUBE1-208	ENST00000615096	BCAN	Q96GW7	911 aa		32	■■■□□ 2.71
SCUBE1-208	ENST00000615096	SLC26A8	Q96RN1	970 aa		31.99	■■■□□ 2.71
SCUBE1-208	ENST00000615096	TIMELESS	Q9UNS1	1208 aa		31.98	■■■□□ 2.71
SCUBE1-208	ENST00000615096	TBX22	Q9Y458	520 aa		31.97	■■■□□ 2.71
SCUBE1-208	ENST00000615096	DIP2A	Q14689	1571 aa		31.95	■■■□□ 2.71
SCUBE1-208	ENST00000615096	ALK	Q9UM73	1620 aa		31.94	■■■□□ 2.7
SCUBE1-208	ENST00000615096	PRAG1	Q86YV5	1406 aa		31.93	■■■□□ 2.7
SCUBE1-208	ENST00000615096	C14orf93	Q9H972	538 aa	Known RBP	31.91	■■■□□ 2.7
SCUBE1-208	ENST00000615096	SETD1A	O15047	1707 aa	Known RBP	31.91	■■■□□ 2.7
SCUBE1-208	ENST00000615096	CFAP70	Q5T0N1	1121 aa		31.88	■■■□□ 2.69
SCUBE1-208	ENST00000615096	MET	P08581	1390 aa		31.87	■■■□□ 2.69
SCUBE1-208	ENST00000615096	LAMC1	P11047	1609 aa		31.86	■■■□□ 2.69
SCUBE1-208	ENST00000615096	PIK3R4	Q99570	1358 aa		31.85	■■■□□ 2.69
SCUBE1-208	ENST00000615096	NBPF8	Q3BBV2	869 aa		31.85	■■■□□ 2.69
SCUBE1-208	ENST00000615096	ASXL1	Q8IXJ9	1541 aa		31.82	■■■□□ 2.68
SCUBE1-208	ENST00000615096	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	31.81	■■■□□ 2.68
SCUBE1-208	ENST00000615096	PTPRU	Q92729	1446 aa		31.81	■■■□□ 2.68
SCUBE1-208	ENST00000615096	KIAA1210	Q9ULL0	1709 aa		31.8	■■■□□ 2.68
SCUBE1-208	ENST00000615096	KCNA6	P17658	529 aa		31.78	■■■□□ 2.68
SCUBE1-208	ENST00000615096	ADGRB1	O14514	1584 aa		31.77	■■■□□ 2.68
SCUBE1-208	ENST00000615096	NWD1	Q149M9	1564 aa		31.77	■■■□□ 2.68
SCUBE1-208	ENST00000615096	CHD2	O14647	1828 aa	Known RBP	31.77	■■■□□ 2.68
SCUBE1-208	ENST00000615096	TMEM132E	Q6IEE7	984 aa		31.77	■■■□□ 2.68
SCUBE1-208	ENST00000615096	TRPM1	Q7Z4N2	1603 aa		31.77	■■■□□ 2.68
SCUBE1-208	ENST00000615096	STRCP1	A6NGW2	1772 aa		31.75	■■■□□ 2.67
SCUBE1-208	ENST00000615096	NBPF1	Q3BBV0	1214 aa		31.74	■■■□□ 2.67
SCUBE1-208	ENST00000615096	AMOTL2	Q9Y2J4	779 aa		31.74	■■■□□ 2.67
SCUBE1-208	ENST00000615096	XRN1	Q8IZH2	1706 aa	Known RBP	31.72	■■■□□ 2.67
SCUBE1-208	ENST00000615096	LTBP4	Q8N2S1	1624 aa		31.72	■■■□□ 2.67
SCUBE1-208	ENST00000615096	LRPPRC	P42704	1394 aa	Known RBP	31.7	■■■□□ 2.67
SCUBE1-208	ENST00000615096	YTHDC2	Q9H6S0	1430 aa	Known RBP	31.7	■■■□□ 2.67
SCUBE1-208	ENST00000615096	RALGAPB	Q86X10	1494 aa		31.7	■■■□□ 2.66
SCUBE1-208	ENST00000615096	NKTR	P30414	1462 aa	Known RBP	31.68	■■■□□ 2.66
SCUBE1-208	ENST00000615096	ABCC11	Q96J66	1382 aa		31.68	■■■□□ 2.66
SCUBE1-208	ENST00000615096	CPS1	P31327	1500 aa		31.67	■■■□□ 2.66
SCUBE1-208	ENST00000615096	TECPR2	O15040	1411 aa		31.66	■■■□□ 2.66
SCUBE1-208	ENST00000615096	ROCK2	O75116	1388 aa	Known RBP	31.66	■■■□□ 2.66
SCUBE1-208	ENST00000615096	GPRASP1	Q5JY77	1395 aa		31.66	■■■□□ 2.66
SCUBE1-208	ENST00000615096	STK26	Q9P289	416 aa		31.65	■■■□□ 2.66
SCUBE1-208	ENST00000615096	KNDC1	Q76NI1	1749 aa		31.63	■■■□□ 2.65
SCUBE1-208	ENST00000615096	PTCH1	Q13635	1447 aa		31.62	■■■□□ 2.65
SCUBE1-208	ENST00000615096	LRRC7	Q96NW7	1537 aa		31.61	■■■□□ 2.65
SCUBE1-208	ENST00000615096	ROBO2	Q9HCK4	1378 aa		31.61	■■■□□ 2.65
SCUBE1-208	ENST00000615096	DLC1	Q96QB1	1528 aa		31.59	■■■□□ 2.65
SCUBE1-208	ENST00000615096	PROSER2	Q86WR7	435 aa	Predicted RBP	31.59	■■■□□ 2.65
SCUBE1-208	ENST00000615096	SIRT1	Q96EB6	747 aa		31.59	■■■□□ 2.65
SCUBE1-208	ENST00000615096	TRAK1	Q9UPV9	953 aa		31.59	■■■□□ 2.65
SCUBE1-208	ENST00000615096	CARD11	Q9BXL7	1154 aa		31.56	■■■□□ 2.64
SCUBE1-208	ENST00000615096	FAM135B	Q49AJ0	1406 aa		31.56	■■■□□ 2.64
SCUBE1-208	ENST00000615096	TMEM94	Q12767	1356 aa		31.55	■■■□□ 2.64
SCUBE1-208	ENST00000615096	RBM33	Q96EV2	1170 aa	Known RBP	31.53	■■■□□ 2.64
SCUBE1-208	ENST00000615096	NCOA3	Q9Y6Q9	1424 aa		31.52	■■■□□ 2.64
SCUBE1-208	ENST00000615096	WAPL	Q7Z5K2	1190 aa		31.52	■■■□□ 2.64
SCUBE1-208	ENST00000615096	ARHGEF28	Q8N1W1	1705 aa	Known RBP	31.52	■■■□□ 2.64
SCUBE1-208	ENST00000615096	PLEKHH1	Q9ULM0	1364 aa		31.51	■■■□□ 2.63
SCUBE1-208	ENST00000615096	XIRP1	Q702N8	1843 aa	Known RBP	31.5	■■■□□ 2.63
SCUBE1-208	ENST00000615096	PRAM1	Q96QH2	718 aa		31.49	■■■□□ 2.63
SCUBE1-208	ENST00000615096	ZEB1	P37275	1124 aa	Predicted RBP	31.46	■■■□□ 2.63
SCUBE1-208	ENST00000615096	CERK	Q8TCT0	537 aa		31.46	■■■□□ 2.63
SCUBE1-208	ENST00000615096	POGK	Q9P215	609 aa		31.45	■■■□□ 2.63
SCUBE1-208	ENST00000615096	IQSEC2	Q5JU85	1478 aa		31.43	■■■□□ 2.62
SCUBE1-208	ENST00000615096	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	31.42	■■■□□ 2.62
SCUBE1-208	ENST00000615096	EIF3A	Q14152	1382 aa	Known RBP	31.42	■■■□□ 2.62
SCUBE1-208	ENST00000615096	ADGRL3	Q9HAR2	1447 aa		31.41	■■■□□ 2.62
SCUBE1-208	ENST00000615096	SAFB2	Q14151	953 aa	Known RBP eCLIP	31.41	■■■□□ 2.62
SCUBE1-208	ENST00000615096	NALCN	Q8IZF0	1738 aa		31.41	■■■□□ 2.62

Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms