RNA–Protein interactions for RNA: ENST00000615065.1

PRKN-211, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-211ENST00000615065 RRBP1Q9P2E9 1410 aaKnown RBP22.64■■□□□ 1.21
PRKN-211ENST00000615065 SLC26A8Q96RN1 970 aa22.63■■□□□ 1.21
PRKN-211ENST00000615065 RIMS2Q9UQ26 1411 aa22.61■■□□□ 1.21
PRKN-211ENST00000615065 SENP3Q9H4L4 574 aaPredicted RBP22.6■■□□□ 1.21
PRKN-211ENST00000615065 NWD1Q149M9 1564 aa22.59■■□□□ 1.21
PRKN-211ENST00000615065 CHGAP10645 457 aaKnown RBP22.58■■□□□ 1.21
PRKN-211ENST00000615065 SPHKAPQ2M3C7 1700 aa22.57■■□□□ 1.2
PRKN-211ENST00000615065 KCNA6P17658 529 aa22.57■■□□□ 1.2
PRKN-211ENST00000615065 BCANQ96GW7 911 aa22.57■■□□□ 1.2
PRKN-211ENST00000615065 PLEKHG1Q9ULL1 1385 aa22.57■■□□□ 1.2
PRKN-211ENST00000615065 TMEM94Q12767 1356 aa22.56■■□□□ 1.2
PRKN-211ENST00000615065 MED1Q15648 1581 aaPredicted RBP22.55■■□□□ 1.2
PRKN-211ENST00000615065 CHD2O14647 1828 aaKnown RBP22.55■■□□□ 1.2
PRKN-211ENST00000615065 PPP1R15AO75807 674 aaPredicted RBP22.55■■□□□ 1.2
PRKN-211ENST00000615065 NKTRP30414 1462 aaKnown RBP22.54■■□□□ 1.2
PRKN-211ENST00000615065 NAIPQ13075 1403 aa22.53■■□□□ 1.2
PRKN-211ENST00000615065 HDGFP51858 240 aaKnown RBP22.52■■□□□ 1.2
PRKN-211ENST00000615065 PROSER2Q86WR7 435 aaPredicted RBP22.52■■□□□ 1.2
PRKN-211ENST00000615065 RBM33Q96EV2 1170 aaKnown RBP22.52■■□□□ 1.2
PRKN-211ENST00000615065 NUTM2DQ5VT03 806 aaPredicted RBP22.51■■□□□ 1.19
PRKN-211ENST00000615065 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.5■■□□□ 1.19
PRKN-211ENST00000615065 ADAMTS13Q76LX8 1427 aa22.48■■□□□ 1.19
PRKN-211ENST00000615065 DIP2AQ14689 1571 aa22.47■■□□□ 1.19
PRKN-211ENST00000615065 CLTCL1P53675 1640 aa22.46■■□□□ 1.19
PRKN-211ENST00000615065 TBX22Q9Y458 520 aa22.45■■□□□ 1.18
PRKN-211ENST00000615065 ROBO1Q9Y6N7 1651 aa22.45■■□□□ 1.18
PRKN-211ENST00000615065 HFM1A2PYH4 1435 aa22.44■■□□□ 1.18
PRKN-211ENST00000615065 TRPM2O94759 1503 aa22.43■■□□□ 1.18
PRKN-211ENST00000615065 FAM135BQ49AJ0 1406 aa22.43■■□□□ 1.18
PRKN-211ENST00000615065 SOCS7O14512 581 aa22.43■■□□□ 1.18
PRKN-211ENST00000615065 NRXN3Q9Y4C0 1643 aa22.42■■□□□ 1.18
PRKN-211ENST00000615065 MSH6P52701 1360 aa22.41■■□□□ 1.18
PRKN-211ENST00000615065 KIF1BO60333 1816 aa22.4■■□□□ 1.18
PRKN-211ENST00000615065 PIK3R4Q99570 1358 aa22.38■■□□□ 1.17
PRKN-211ENST00000615065 SETBP1Q9Y6X0 1596 aa22.38■■□□□ 1.17
PRKN-211ENST00000615065 ZNF326Q5BKZ1 582 aaKnown RBP22.37■■□□□ 1.17
PRKN-211ENST00000615065 TRIM52Q96A61 297 aa22.37■■□□□ 1.17
PRKN-211ENST00000615065 NEXMIFQ5QGS0 1516 aa22.36■■□□□ 1.17
PRKN-211ENST00000615065 PTPRUQ92729 1446 aa22.36■■□□□ 1.17
PRKN-211ENST00000615065 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.34■■□□□ 1.17
PRKN-211ENST00000615065 NCOA3Q9Y6Q9 1424 aa22.34■■□□□ 1.17
PRKN-211ENST00000615065 XRN1Q8IZH2 1706 aaKnown RBP22.34■■□□□ 1.17
PRKN-211ENST00000615065 PHF23Q9BUL5 403 aaPredicted RBP22.33■■□□□ 1.17
PRKN-211ENST00000615065 SLAIN2Q9P270 581 aa22.32■■□□□ 1.16
PRKN-211ENST00000615065 PHLPP1O60346 1717 aa22.31■■□□□ 1.16
PRKN-211ENST00000615065 C14orf37Q86TY3 774 aa22.31■■□□□ 1.16
PRKN-211ENST00000615065 AMOTL2Q9Y2J4 779 aa22.31■■□□□ 1.16
PRKN-211ENST00000615065 SLC4A1APQ9BWU0 796 aaKnown RBP22.3■■□□□ 1.16
PRKN-211ENST00000615065 METP08581 1390 aa22.28■■□□□ 1.16
PRKN-211ENST00000615065 C19orf44Q9H6X5 657 aa22.26■■□□□ 1.15
PRKN-211ENST00000615065 SETD1AO15047 1707 aaKnown RBP22.25■■□□□ 1.15
PRKN-211ENST00000615065 COL16A1Q07092 1604 aaPredicted RBP22.24■■□□□ 1.15
PRKN-211ENST00000615065 PPLO60437 1756 aa22.24■■□□□ 1.15
PRKN-211ENST00000615065 ATF3P18847 181 aa22.23■■□□□ 1.15
PRKN-211ENST00000615065 FOXD1Q16676 465 aa22.23■■□□□ 1.15
PRKN-211ENST00000615065 CADPS2Q86UW7 1296 aa22.23■■□□□ 1.15
PRKN-211ENST00000615065 DCCP43146 1447 aa22.2■■□□□ 1.14
PRKN-211ENST00000615065 AHDC1Q5TGY3 1603 aaPredicted RBP22.2■■□□□ 1.14
PRKN-211ENST00000615065 NALCNQ8IZF0 1738 aa22.2■■□□□ 1.14
PRKN-211ENST00000615065 RGS17Q9UGC6 210 aaPredicted RBP22.19■■□□□ 1.14
PRKN-211ENST00000615065 VGFO15240 615 aaPredicted RBP22.18■■□□□ 1.14
PRKN-211ENST00000615065 JCADQ9P266 1359 aa22.17■■□□□ 1.14
PRKN-211ENST00000615065 RPGRIP1LQ68CZ1 1315 aa22.16■■□□□ 1.14
PRKN-211ENST00000615065 ADGRL3Q9HAR2 1447 aa22.15■■□□□ 1.14
PRKN-211ENST00000615065 CCDC144AA2RUR9 1427 aa22.14■■□□□ 1.14
PRKN-211ENST00000615065 MST1RQ04912 1400 aa22.14■■□□□ 1.14
PRKN-211ENST00000615065 BRINP3Q76B58 766 aa22.14■■□□□ 1.13
PRKN-211ENST00000615065 MPHOSPH9Q99550 1183 aa22.14■■□□□ 1.13
PRKN-211ENST00000615065 ASXL1Q8IXJ9 1541 aa22.13■■□□□ 1.13
PRKN-211ENST00000615065 IFT172Q9UG01 1749 aa22.13■■□□□ 1.13
PRKN-211ENST00000615065 PTCH1Q13635 1447 aa22.13■■□□□ 1.13
PRKN-211ENST00000615065 SHPRHQ149N8 1683 aa22.12■■□□□ 1.13
PRKN-211ENST00000615065 NHSL1Q5SYE7 1610 aa22.11■■□□□ 1.13
PRKN-211ENST00000615065 SPATA31E1Q6ZUB1 1445 aa22.11■■□□□ 1.13
PRKN-211ENST00000615065 ROBO2Q9HCK4 1378 aa22.11■■□□□ 1.13
PRKN-211ENST00000615065 SETD5Q9C0A6 1442 aa22.1■■□□□ 1.13
PRKN-211ENST00000615065 LRP6O75581 1613 aa22.09■■□□□ 1.13
PRKN-211ENST00000615065 PRAG1Q86YV5 1406 aa22.08■■□□□ 1.13
PRKN-211ENST00000615065 RGL3Q3MIN7 710 aa22.08■■□□□ 1.13
PRKN-211ENST00000615065 POTEAQ6S8J7 498 aa22.07■■□□□ 1.12
PRKN-211ENST00000615065 ADGRF5Q8IZF2 1346 aa22.06■■□□□ 1.12
PRKN-211ENST00000615065 SPATA31A6Q5VVP1 1343 aa22.05■■□□□ 1.12
PRKN-211ENST00000615065 ANKRD30BQ9BXX2 1392 aa22.03■■□□□ 1.12
PRKN-211ENST00000615065 RAB3GAP2Q9H2M9 1393 aa22.03■■□□□ 1.12
PRKN-211ENST00000615065 C1orf167Q5SNV9 1468 aa22.03■■□□□ 1.12
PRKN-211ENST00000615065 DDX17Q92841 729 aaKnown RBP22.01■■□□□ 1.11
PRKN-211ENST00000615065 ACIN1Q9UKV3 1341 aaKnown RBP22.01■■□□□ 1.11
PRKN-211ENST00000615065 PIK3C2GO75747 1445 aa21.99■■□□□ 1.11
PRKN-211ENST00000615065 LAMC1P11047 1609 aa21.98■■□□□ 1.11
PRKN-211ENST00000615065 KNDC1Q76NI1 1749 aa21.98■■□□□ 1.11
PRKN-211ENST00000615065 MEX3CQ5U5Q3 659 aaKnown RBP21.98■■□□□ 1.11
PRKN-211ENST00000615065 CDC42BPGQ6DT37 1551 aa21.96■■□□□ 1.11
PRKN-211ENST00000615065 TECPR2O15040 1411 aa21.96■■□□□ 1.11
PRKN-211ENST00000615065 NUTM2BA6NNL0 878 aaPredicted RBP21.95■■□□□ 1.1
PRKN-211ENST00000615065 NUTM2EB1AL46 878 aaPredicted RBP21.95■■□□□ 1.1
PRKN-211ENST00000615065 NUTM2AQ8IVF1 878 aaPredicted RBP21.95■■□□□ 1.1
PRKN-211ENST00000615065 STK26Q9P289 416 aa21.95■■□□□ 1.1
PRKN-211ENST00000615065 LRPPRCP42704 1394 aaKnown RBP21.95■■□□□ 1.1
PRKN-211ENST00000615065 TMEM132EQ6IEE7 984 aa21.94■■□□□ 1.1
PRKN-211ENST00000615065 LRRC59Q96AG4 307 aaKnown RBP21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms