RNA–Protein interactions for RNA: ENST00000614398.4

CBWD3-210, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,563 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-210ENST00000614398 TRPM1Q7Z4N2 1603 aa9.02□□□□□ -0.97
CBWD3-210ENST00000614398 FBXO31Q5XUX0 539 aaPredicted RBP9.02□□□□□ -0.97
CBWD3-210ENST00000614398 IDI1Q13907 227 aa9.01□□□□□ -0.97
CBWD3-210ENST00000614398 PRAG1Q86YV5 1406 aa9.01□□□□□ -0.97
CBWD3-210ENST00000614398 SETBP1Q9Y6X0 1596 aa9.01□□□□□ -0.97
CBWD3-210ENST00000614398 RALGAPBQ86X10 1494 aa9.01□□□□□ -0.97
CBWD3-210ENST00000614398 PPP1R15AO75807 674 aaPredicted RBP9□□□□□ -0.97
CBWD3-210ENST00000614398 L3MBTL2Q969R5 705 aa9□□□□□ -0.97
CBWD3-210ENST00000614398 SETD1AO15047 1707 aaKnown RBP9□□□□□ -0.97
CBWD3-210ENST00000614398 KDM4FA0A1W2PPD8 638 aa8.99□□□□□ -0.97
CBWD3-210ENST00000614398 DIP2AQ14689 1571 aa8.99□□□□□ -0.97
CBWD3-210ENST00000614398 PIK3C2GO75747 1445 aa8.99□□□□□ -0.97
CBWD3-210ENST00000614398 GPRASP1Q5JY77 1395 aa8.99□□□□□ -0.97
CBWD3-210ENST00000614398 POLR1AO95602 1720 aaPredicted RBP8.98□□□□□ -0.97
CBWD3-210ENST00000614398 TMEM2Q9UHN6 1383 aa8.98□□□□□ -0.97
CBWD3-210ENST00000614398 RIMS2Q9UQ26 1411 aa8.98□□□□□ -0.97
CBWD3-210ENST00000614398 NRXN3Q9Y4C0 1643 aa8.98□□□□□ -0.97
CBWD3-210ENST00000614398 NEUROD1Q13562 356 aa8.98□□□□□ -0.97
CBWD3-210ENST00000614398 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.97□□□□□ -0.97
CBWD3-210ENST00000614398 IQGAP1P46940 1657 aa8.97□□□□□ -0.97
CBWD3-210ENST00000614398 MED14O60244 1454 aa8.96□□□□□ -0.97
CBWD3-210ENST00000614398 CEBPAP49715 358 aaPredicted RBP8.96□□□□□ -0.97
CBWD3-210ENST00000614398 KNDC1Q76NI1 1749 aa8.96□□□□□ -0.98
CBWD3-210ENST00000614398 PLEKHG1Q9ULL1 1385 aa8.95□□□□□ -0.98
CBWD3-210ENST00000614398 ADGRB1O14514 1584 aa8.95□□□□□ -0.98
CBWD3-210ENST00000614398 HDGFP51858 240 aaKnown RBP8.95□□□□□ -0.98
CBWD3-210ENST00000614398 SCAF11Q99590 1463 aaKnown RBP8.95□□□□□ -0.98
CBWD3-210ENST00000614398 VGFO15240 615 aaPredicted RBP8.94□□□□□ -0.98
CBWD3-210ENST00000614398 THEMISQ8N1K5 641 aaPredicted RBP8.94□□□□□ -0.98
CBWD3-210ENST00000614398 LMTK3Q96Q04 1460 aa8.94□□□□□ -0.98
CBWD3-210ENST00000614398 ALKQ9UM73 1620 aa8.94□□□□□ -0.98
CBWD3-210ENST00000614398 ASXL1Q8IXJ9 1541 aa8.93□□□□□ -0.98
CBWD3-210ENST00000614398 DCAF11Q8TEB1 546 aa8.93□□□□□ -0.98
CBWD3-210ENST00000614398 DLC1Q96QB1 1528 aa8.93□□□□□ -0.98
CBWD3-210ENST00000614398 NBPF8Q3BBV2 869 aa8.92□□□□□ -0.98
CBWD3-210ENST00000614398 C14orf93Q9H972 538 aaKnown RBP8.91□□□□□ -0.98
CBWD3-210ENST00000614398 ADGRF5Q8IZF2 1346 aa8.91□□□□□ -0.98
CBWD3-210ENST00000614398 ADAMTS13Q76LX8 1427 aa8.91□□□□□ -0.98
CBWD3-210ENST00000614398 RGL3Q3MIN7 710 aa8.91□□□□□ -0.98
CBWD3-210ENST00000614398 ZNF326Q5BKZ1 582 aaKnown RBP8.91□□□□□ -0.98
CBWD3-210ENST00000614398 STAG3Q9UJ98 1225 aa8.91□□□□□ -0.98
CBWD3-210ENST00000614398 PIK3R4Q99570 1358 aa8.91□□□□□ -0.98
CBWD3-210ENST00000614398 TECPR2O15040 1411 aa8.9□□□□□ -0.98
CBWD3-210ENST00000614398 NWD1Q149M9 1564 aa8.9□□□□□ -0.98
CBWD3-210ENST00000614398 XRN1Q8IZH2 1706 aaKnown RBP8.9□□□□□ -0.98
CBWD3-210ENST00000614398 ARHGEF28Q8N1W1 1705 aaKnown RBP8.9□□□□□ -0.98
CBWD3-210ENST00000614398 CPS1P31327 1500 aa8.9□□□□□ -0.98
CBWD3-210ENST00000614398 CHGAP10645 457 aaKnown RBP8.89□□□□□ -0.99
CBWD3-210ENST00000614398 STRCQ7RTU9 1775 aa8.89□□□□□ -0.99
CBWD3-210ENST00000614398 EID1Q9Y6B2 187 aa8.89□□□□□ -0.99
CBWD3-210ENST00000614398 CHD2O14647 1828 aaKnown RBP8.88□□□□□ -0.99
CBWD3-210ENST00000614398 ROCK2O75116 1388 aaKnown RBP8.88□□□□□ -0.99
CBWD3-210ENST00000614398 SBNO2Q9Y2G9 1366 aa8.88□□□□□ -0.99
CBWD3-210ENST00000614398 NPHP4O75161 1426 aaPredicted RBP8.87□□□□□ -0.99
CBWD3-210ENST00000614398 PLPPR3Q6T4P5 718 aa8.87□□□□□ -0.99
CBWD3-210ENST00000614398 LRPPRCP42704 1394 aaKnown RBP8.87□□□□□ -0.99
CBWD3-210ENST00000614398 LTKP29376 864 aa8.87□□□□□ -0.99
CBWD3-210ENST00000614398 ANKLE2Q86XL3 938 aa8.87□□□□□ -0.99
CBWD3-210ENST00000614398 SIRT1Q96EB6 747 aa8.87□□□□□ -0.99
CBWD3-210ENST00000614398 TBX22Q9Y458 520 aa8.87□□□□□ -0.99
CBWD3-210ENST00000614398 KDM2AQ9Y2K7 1162 aa8.86□□□□□ -0.99
CBWD3-210ENST00000614398 EIF3AQ14152 1382 aaKnown RBP8.86□□□□□ -0.99
CBWD3-210ENST00000614398 PTCH1Q13635 1447 aa8.86□□□□□ -0.99
CBWD3-210ENST00000614398 FAM135BQ49AJ0 1406 aa8.86□□□□□ -0.99
CBWD3-210ENST00000614398 TXNDC2Q86VQ3 553 aa8.86□□□□□ -0.99
CBWD3-210ENST00000614398 ABCC11Q96J66 1382 aa8.86□□□□□ -0.99
CBWD3-210ENST00000614398 YTHDC2Q9H6S0 1430 aaKnown RBP8.86□□□□□ -0.99
CBWD3-210ENST00000614398 ADGRB2O60241 1585 aa8.85□□□□□ -0.99
CBWD3-210ENST00000614398 QRICH2Q9H0J4 1663 aa8.85□□□□□ -0.99
CBWD3-210ENST00000614398 USP47Q96K76 1375 aa8.85□□□□□ -0.99
CBWD3-210ENST00000614398 SCAF1Q9H7N4 1312 aaKnown RBP8.84□□□□□ -0.99
CBWD3-210ENST00000614398 SLC24A1O60721 1099 aa8.84□□□□□ -0.99
CBWD3-210ENST00000614398 NKTRP30414 1462 aaKnown RBP8.84□□□□□ -0.99
CBWD3-210ENST00000614398 CFAP70Q5T0N1 1121 aa8.84□□□□□ -0.99
CBWD3-210ENST00000614398 EIF4G2P78344 907 aaKnown RBP eCLIP8.83□□□□□ -1
CBWD3-210ENST00000614398 NBPF1Q3BBV0 1214 aa8.82□□□□□ -1
CBWD3-210ENST00000614398 CARD11Q9BXL7 1154 aa8.82□□□□□ -1
CBWD3-210ENST00000614398 METP08581 1390 aa8.82□□□□□ -1
CBWD3-210ENST00000614398 PTPRUQ92729 1446 aa8.82□□□□□ -1
CBWD3-210ENST00000614398 NCOA3Q9Y6Q9 1424 aa8.81□□□□□ -1
CBWD3-210ENST00000614398 PUS7Q96PZ0 661 aaKnown RBP8.8□□□□□ -1
CBWD3-210ENST00000614398 HSPA5P11021 654 aaKnown RBP8.79□□□□□ -1
CBWD3-210ENST00000614398 STRCP1A6NGW2 1772 aa8.79□□□□□ -1
CBWD3-210ENST00000614398 CDC42BPGQ6DT37 1551 aa8.79□□□□□ -1
CBWD3-210ENST00000614398 NUTM2DQ5VT03 806 aaPredicted RBP8.78□□□□□ -1
CBWD3-210ENST00000614398 TESK2Q96S53 571 aa8.78□□□□□ -1
CBWD3-210ENST00000614398 CENPJQ9HC77 1338 aaPredicted RBP8.78□□□□□ -1
CBWD3-210ENST00000614398 NCKAP5LQ9HCH0 1330 aa8.78□□□□□ -1
CBWD3-210ENST00000614398 DMRT2Q9Y5R5 561 aa8.78□□□□□ -1
CBWD3-210ENST00000614398 TULP4Q9NRJ4 1543 aa8.78□□□□□ -1
CBWD3-210ENST00000614398 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.78□□□□□ -1
CBWD3-210ENST00000614398 ZNF316A6NFI3 1004 aaPredicted RBP8.77□□□□□ -1
CBWD3-210ENST00000614398 KCNA6P17658 529 aa8.77□□□□□ -1.01
CBWD3-210ENST00000614398 MYOM1P52179 1685 aa8.77□□□□□ -1.01
CBWD3-210ENST00000614398 TOPAZ1Q8N9V7 1692 aa8.77□□□□□ -1.01
CBWD3-210ENST00000614398 NALCNQ8IZF0 1738 aa8.77□□□□□ -1.01
CBWD3-210ENST00000614398 FMN2Q9NZ56 1722 aa8.76□□□□□ -1.01
CBWD3-210ENST00000614398 ROBO2Q9HCK4 1378 aa8.76□□□□□ -1.01
CBWD3-210ENST00000614398 ST20-MTHFSA0A0A6YYL1 179 aa8.75□□□□□ -1.01
CBWD3-210ENST00000614398 ITSN1Q15811 1721 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms