RNA–Protein interactions for RNA: ENST00000614078.4

PCSK4-213, Transcript of proprotein convertase subtilisin/kexin type 4, humanhuman

TSL 4

Gene PCSK4, Length 730 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK4-213ENST00000614078 SYNMO15061 1565 aa27.22■■□□□ 1.95
PCSK4-213ENST00000614078 XIRP1Q702N8 1843 aaKnown RBP27.21■■□□□ 1.95
PCSK4-213ENST00000614078 SCAF11Q99590 1463 aaKnown RBP27.19■■□□□ 1.94
PCSK4-213ENST00000614078 PHF23Q9BUL5 403 aaPredicted RBP27.19■■□□□ 1.94
PCSK4-213ENST00000614078 TXNDC2Q86VQ3 553 aa27.18■■□□□ 1.94
PCSK4-213ENST00000614078 KDM5AP29375 1690 aaKnown RBP27.17■■□□□ 1.94
PCSK4-213ENST00000614078 HDGFP51858 240 aaKnown RBP27.17■■□□□ 1.94
PCSK4-213ENST00000614078 PIK3C2BO00750 1634 aa27.16■■□□□ 1.94
PCSK4-213ENST00000614078 ARHGAP23Q9P227 1491 aa27.15■■□□□ 1.94
PCSK4-213ENST00000614078 EID1Q9Y6B2 187 aa27.15■■□□□ 1.94
PCSK4-213ENST00000614078 TMEM2Q9UHN6 1383 aa27.12■■□□□ 1.93
PCSK4-213ENST00000614078 SLIT1O75093 1534 aa27.12■■□□□ 1.93
PCSK4-213ENST00000614078 SPHKAPQ2M3C7 1700 aa27.12■■□□□ 1.93
PCSK4-213ENST00000614078 CHGAP10645 457 aaKnown RBP27.11■■□□□ 1.93
PCSK4-213ENST00000614078 RBM33Q96EV2 1170 aaKnown RBP27.11■■□□□ 1.93
PCSK4-213ENST00000614078 TRPM2O94759 1503 aa27.11■■□□□ 1.93
PCSK4-213ENST00000614078 ADGRB3O60242 1522 aa27.1■■□□□ 1.93
PCSK4-213ENST00000614078 RGS17Q9UGC6 210 aaPredicted RBP27.08■■□□□ 1.93
PCSK4-213ENST00000614078 FOXD1Q16676 465 aa27.07■■□□□ 1.92
PCSK4-213ENST00000614078 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.07■■□□□ 1.92
PCSK4-213ENST00000614078 TMEM131LA2VDJ0 1609 aa27.04■■□□□ 1.92
PCSK4-213ENST00000614078 SLC26A8Q96RN1 970 aa27.03■■□□□ 1.92
PCSK4-213ENST00000614078 CCDC144AA2RUR9 1427 aa27.02■■□□□ 1.92
PCSK4-213ENST00000614078 ZNF326Q5BKZ1 582 aaKnown RBP26.99■■□□□ 1.91
PCSK4-213ENST00000614078 TMEM94Q12767 1356 aa26.98■■□□□ 1.91
PCSK4-213ENST00000614078 RIMS2Q9UQ26 1411 aa26.98■■□□□ 1.91
PCSK4-213ENST00000614078 CLTCL1P53675 1640 aa26.98■■□□□ 1.91
PCSK4-213ENST00000614078 PPP1R15AO75807 674 aaPredicted RBP26.97■■□□□ 1.91
PCSK4-213ENST00000614078 RPGRIP1LQ68CZ1 1315 aa26.96■■□□□ 1.91
PCSK4-213ENST00000614078 ZFYVE9O95405 1425 aa26.96■■□□□ 1.91
PCSK4-213ENST00000614078 ANKRD30BQ9BXX2 1392 aa26.94■■□□□ 1.9
PCSK4-213ENST00000614078 KIF1BO60333 1816 aa26.93■■□□□ 1.9
PCSK4-213ENST00000614078 MYO5BQ9ULV0 1848 aa26.93■■□□□ 1.9
PCSK4-213ENST00000614078 ROBO1Q9Y6N7 1651 aa26.92■■□□□ 1.9
PCSK4-213ENST00000614078 PROSER2Q86WR7 435 aaPredicted RBP26.92■■□□□ 1.9
PCSK4-213ENST00000614078 KCNA6P17658 529 aa26.91■■□□□ 1.9
PCSK4-213ENST00000614078 BCANQ96GW7 911 aa26.91■■□□□ 1.9
PCSK4-213ENST00000614078 PLEKHG1Q9ULL1 1385 aa26.9■■□□□ 1.9
PCSK4-213ENST00000614078 VGFO15240 615 aaPredicted RBP26.9■■□□□ 1.9
PCSK4-213ENST00000614078 POTEAQ6S8J7 498 aa26.9■■□□□ 1.9
PCSK4-213ENST00000614078 FAM135BQ49AJ0 1406 aa26.9■■□□□ 1.9
PCSK4-213ENST00000614078 SPATA31E1Q6ZUB1 1445 aa26.84■■□□□ 1.89
PCSK4-213ENST00000614078 RGL3Q3MIN7 710 aa26.84■■□□□ 1.89
PCSK4-213ENST00000614078 NUTM2DQ5VT03 806 aaPredicted RBP26.84■■□□□ 1.89
PCSK4-213ENST00000614078 PCGF6Q9BYE7 350 aa26.84■■□□□ 1.89
PCSK4-213ENST00000614078 TBX22Q9Y458 520 aa26.84■■□□□ 1.89
PCSK4-213ENST00000614078 NWD1Q149M9 1564 aa26.81■■□□□ 1.88
PCSK4-213ENST00000614078 STAC3Q96MF2 364 aa26.8■■□□□ 1.88
PCSK4-213ENST00000614078 NEXMIFQ5QGS0 1516 aa26.79■■□□□ 1.88
PCSK4-213ENST00000614078 CHD2O14647 1828 aaKnown RBP26.77■■□□□ 1.88
PCSK4-213ENST00000614078 SETD1AO15047 1707 aaKnown RBP26.77■■□□□ 1.88
PCSK4-213ENST00000614078 PHLPP1O60346 1717 aa26.77■■□□□ 1.88
PCSK4-213ENST00000614078 NKTRP30414 1462 aaKnown RBP26.75■■□□□ 1.87
PCSK4-213ENST00000614078 DHX57Q6P158 1386 aaKnown RBP26.75■■□□□ 1.87
PCSK4-213ENST00000614078 PIK3R4Q99570 1358 aa26.74■■□□□ 1.87
PCSK4-213ENST00000614078 SLAIN2Q9P270 581 aa26.74■■□□□ 1.87
PCSK4-213ENST00000614078 MSH6P52701 1360 aa26.73■■□□□ 1.87
PCSK4-213ENST00000614078 DIP2AQ14689 1571 aa26.72■■□□□ 1.87
PCSK4-213ENST00000614078 ADAMTS13Q76LX8 1427 aa26.72■■□□□ 1.87
PCSK4-213ENST00000614078 SETBP1Q9Y6X0 1596 aa26.71■■□□□ 1.87
PCSK4-213ENST00000614078 PPLO60437 1756 aa26.69■■□□□ 1.86
PCSK4-213ENST00000614078 ADGRF5Q8IZF2 1346 aa26.66■■□□□ 1.86
PCSK4-213ENST00000614078 COL16A1Q07092 1604 aaPredicted RBP26.65■■□□□ 1.86
PCSK4-213ENST00000614078 DCAF11Q8TEB1 546 aa26.65■■□□□ 1.86
PCSK4-213ENST00000614078 LRP6O75581 1613 aa26.64■■□□□ 1.85
PCSK4-213ENST00000614078 MYOM2P54296 1465 aa26.62■■□□□ 1.85
PCSK4-213ENST00000614078 JCADQ9P266 1359 aa26.62■■□□□ 1.85
PCSK4-213ENST00000614078 C14orf37Q86TY3 774 aa26.62■■□□□ 1.85
PCSK4-213ENST00000614078 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.62■■□□□ 1.85
PCSK4-213ENST00000614078 AMOTL2Q9Y2J4 779 aa26.61■■□□□ 1.85
PCSK4-213ENST00000614078 IFT172Q9UG01 1749 aa26.61■■□□□ 1.85
PCSK4-213ENST00000614078 NRXN3Q9Y4C0 1643 aa26.6■■□□□ 1.85
PCSK4-213ENST00000614078 SIN3AQ96ST3 1273 aa26.59■■□□□ 1.85
PCSK4-213ENST00000614078 KDM2AQ9Y2K7 1162 aa26.59■■□□□ 1.85
PCSK4-213ENST00000614078 METP08581 1390 aa26.58■■□□□ 1.85
PCSK4-213ENST00000614078 PIK3C2GO75747 1445 aa26.58■■□□□ 1.85
PCSK4-213ENST00000614078 NEUROD1Q13562 356 aa26.58■■□□□ 1.85
PCSK4-213ENST00000614078 C14orf93Q9H972 538 aaKnown RBP26.58■■□□□ 1.85
PCSK4-213ENST00000614078 PTPRUQ92729 1446 aa26.57■■□□□ 1.84
PCSK4-213ENST00000614078 NRXN1Q9ULB1 1477 aa26.57■■□□□ 1.84
PCSK4-213ENST00000614078 CLSPNQ9HAW4 1339 aa26.55■■□□□ 1.84
PCSK4-213ENST00000614078 NCOA3Q9Y6Q9 1424 aa26.55■■□□□ 1.84
PCSK4-213ENST00000614078 L3MBTL2Q969R5 705 aa26.51■■□□□ 1.83
PCSK4-213ENST00000614078 MEX3CQ5U5Q3 659 aaKnown RBP26.5■■□□□ 1.83
PCSK4-213ENST00000614078 ATF3P18847 181 aa26.49■■□□□ 1.83
PCSK4-213ENST00000614078 CFAP70Q5T0N1 1121 aa26.49■■□□□ 1.83
PCSK4-213ENST00000614078 C19orf44Q9H6X5 657 aa26.49■■□□□ 1.83
PCSK4-213ENST00000614078 AHDC1Q5TGY3 1603 aaPredicted RBP26.49■■□□□ 1.83
PCSK4-213ENST00000614078 NUTM2BA6NNL0 878 aaPredicted RBP26.48■■□□□ 1.83
PCSK4-213ENST00000614078 NUTM2EB1AL46 878 aaPredicted RBP26.48■■□□□ 1.83
PCSK4-213ENST00000614078 NUTM2AQ8IVF1 878 aaPredicted RBP26.48■■□□□ 1.83
PCSK4-213ENST00000614078 BRINP3Q76B58 766 aa26.47■■□□□ 1.83
PCSK4-213ENST00000614078 CADPS2Q86UW7 1296 aa26.46■■□□□ 1.83
PCSK4-213ENST00000614078 SHPRHQ149N8 1683 aa26.46■■□□□ 1.83
PCSK4-213ENST00000614078 LAMC1P11047 1609 aa26.46■■□□□ 1.83
PCSK4-213ENST00000614078 PRAG1Q86YV5 1406 aa26.45■■□□□ 1.82
PCSK4-213ENST00000614078 LRPPRCP42704 1394 aaKnown RBP26.45■■□□□ 1.82
PCSK4-213ENST00000614078 ABCC11Q96J66 1382 aa26.45■■□□□ 1.82
PCSK4-213ENST00000614078 TMEM132EQ6IEE7 984 aa26.44■■□□□ 1.82
PCSK4-213ENST00000614078 DDX17Q92841 729 aaKnown RBP26.44■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms