RNA–Protein interactions for RNA: ENST00000613870.4

PSMB3-208, Transcript of proteasome subunit beta 3, humanhuman

TSL 3

Gene PSMB3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB3-208ENST00000613870 STAG3Q9UJ98 1225 aa12.17□□□□□ -0.46
PSMB3-208ENST00000613870 IQGAP3Q86VI3 1631 aa12.17□□□□□ -0.46
PSMB3-208ENST00000613870 TMEM2Q9UHN6 1383 aa12.17□□□□□ -0.46
PSMB3-208ENST00000613870 EID1Q9Y6B2 187 aa12.16□□□□□ -0.46
PSMB3-208ENST00000613870 UBAP1LF5GYI3 381 aa12.15□□□□□ -0.46
PSMB3-208ENST00000613870 SIN3AQ96ST3 1273 aa12.15□□□□□ -0.46
PSMB3-208ENST00000613870 MYO5BQ9ULV0 1848 aa12.15□□□□□ -0.46
PSMB3-208ENST00000613870 ADGRB3O60242 1522 aa12.15□□□□□ -0.46
PSMB3-208ENST00000613870 LRRC7Q96NW7 1537 aa12.11□□□□□ -0.47
PSMB3-208ENST00000613870 TMEM131LA2VDJ0 1609 aa12.11□□□□□ -0.47
PSMB3-208ENST00000613870 ZFYVE9O95405 1425 aa12.1□□□□□ -0.47
PSMB3-208ENST00000613870 XIRP1Q702N8 1843 aaKnown RBP12.09□□□□□ -0.47
PSMB3-208ENST00000613870 TONSLQ96HA7 1378 aa12.09□□□□□ -0.47
PSMB3-208ENST00000613870 ALKQ9UM73 1620 aa12.09□□□□□ -0.47
PSMB3-208ENST00000613870 TOM1O60784 492 aa12.09□□□□□ -0.47
PSMB3-208ENST00000613870 SLC26A8Q96RN1 970 aa12.09□□□□□ -0.47
PSMB3-208ENST00000613870 ANKRD30BQ9BXX2 1392 aa12.08□□□□□ -0.48
PSMB3-208ENST00000613870 CHGAP10645 457 aaKnown RBP12.08□□□□□ -0.48
PSMB3-208ENST00000613870 RIMS2Q9UQ26 1411 aa12.08□□□□□ -0.48
PSMB3-208ENST00000613870 PIP4K2BP78356 416 aa12.07□□□□□ -0.48
PSMB3-208ENST00000613870 SPHKAPQ2M3C7 1700 aa12.07□□□□□ -0.48
PSMB3-208ENST00000613870 KCNA6P17658 529 aa12.06□□□□□ -0.48
PSMB3-208ENST00000613870 SENP3Q9H4L4 574 aaPredicted RBP12.06□□□□□ -0.48
PSMB3-208ENST00000613870 SCAF1Q9H7N4 1312 aaKnown RBP12.06□□□□□ -0.48
PSMB3-208ENST00000613870 PLEKHG1Q9ULL1 1385 aa12.05□□□□□ -0.48
PSMB3-208ENST00000613870 HDGFP51858 240 aaKnown RBP12.05□□□□□ -0.48
PSMB3-208ENST00000613870 NUTM2DQ5VT03 806 aaPredicted RBP12.05□□□□□ -0.48
PSMB3-208ENST00000613870 BCANQ96GW7 911 aa12.05□□□□□ -0.48
PSMB3-208ENST00000613870 CCDC144AA2RUR9 1427 aa12.04□□□□□ -0.48
PSMB3-208ENST00000613870 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.04□□□□□ -0.48
PSMB3-208ENST00000613870 CHD2O14647 1828 aaKnown RBP12.04□□□□□ -0.48
PSMB3-208ENST00000613870 PPP1R15AO75807 674 aaPredicted RBP12.03□□□□□ -0.48
PSMB3-208ENST00000613870 HSPA1LP34931 641 aa12.03□□□□□ -0.48
PSMB3-208ENST00000613870 TIMELESSQ9UNS1 1208 aa12.03□□□□□ -0.48
PSMB3-208ENST00000613870 NWD1Q149M9 1564 aa12.02□□□□□ -0.49
PSMB3-208ENST00000613870 RBM33Q96EV2 1170 aaKnown RBP12.02□□□□□ -0.49
PSMB3-208ENST00000613870 TBX22Q9Y458 520 aa12.02□□□□□ -0.49
PSMB3-208ENST00000613870 TMEM94Q12767 1356 aa12.02□□□□□ -0.49
PSMB3-208ENST00000613870 ADAMTS13Q76LX8 1427 aa12.02□□□□□ -0.49
PSMB3-208ENST00000613870 CLTCL1P53675 1640 aa12.01□□□□□ -0.49
PSMB3-208ENST00000613870 RGL3Q3MIN7 710 aa12.01□□□□□ -0.49
PSMB3-208ENST00000613870 PROSER2Q86WR7 435 aaPredicted RBP12.01□□□□□ -0.49
PSMB3-208ENST00000613870 DISP3Q9P2K9 1392 aa12.01□□□□□ -0.49
PSMB3-208ENST00000613870 TRPM2O94759 1503 aa12□□□□□ -0.49
PSMB3-208ENST00000613870 ZNF326Q5BKZ1 582 aaKnown RBP11.99□□□□□ -0.49
PSMB3-208ENST00000613870 L3MBTL2Q969R5 705 aa11.99□□□□□ -0.49
PSMB3-208ENST00000613870 NKTRP30414 1462 aaKnown RBP11.99□□□□□ -0.49
PSMB3-208ENST00000613870 KIF1BO60333 1816 aa11.99□□□□□ -0.49
PSMB3-208ENST00000613870 KDM2AQ9Y2K7 1162 aa11.98□□□□□ -0.49
PSMB3-208ENST00000613870 NRXN3Q9Y4C0 1643 aa11.97□□□□□ -0.49
PSMB3-208ENST00000613870 DIP2AQ14689 1571 aa11.96□□□□□ -0.49
PSMB3-208ENST00000613870 NEXMIFQ5QGS0 1516 aa11.96□□□□□ -0.49
PSMB3-208ENST00000613870 ILDR2Q71H61 639 aa11.96□□□□□ -0.49
PSMB3-208ENST00000613870 DCAF11Q8TEB1 546 aa11.96□□□□□ -0.49
PSMB3-208ENST00000613870 PTPRUQ92729 1446 aa11.95□□□□□ -0.5
PSMB3-208ENST00000613870 PIK3R4Q99570 1358 aa11.95□□□□□ -0.5
PSMB3-208ENST00000613870 SETBP1Q9Y6X0 1596 aa11.95□□□□□ -0.5
PSMB3-208ENST00000613870 AMOTL2Q9Y2J4 779 aa11.94□□□□□ -0.5
PSMB3-208ENST00000613870 FAM135BQ49AJ0 1406 aa11.94□□□□□ -0.5
PSMB3-208ENST00000613870 MSH6P52701 1360 aa11.92□□□□□ -0.5
PSMB3-208ENST00000613870 ROBO1Q9Y6N7 1651 aa11.92□□□□□ -0.5
PSMB3-208ENST00000613870 NCOA3Q9Y6Q9 1424 aa11.92□□□□□ -0.5
PSMB3-208ENST00000613870 METP08581 1390 aa11.92□□□□□ -0.5
PSMB3-208ENST00000613870 SLAIN2Q9P270 581 aa11.91□□□□□ -0.5
PSMB3-208ENST00000613870 XRN1Q8IZH2 1706 aaKnown RBP11.91□□□□□ -0.5
PSMB3-208ENST00000613870 PPLO60437 1756 aa11.9□□□□□ -0.5
PSMB3-208ENST00000613870 MED1Q15648 1581 aaPredicted RBP11.9□□□□□ -0.5
PSMB3-208ENST00000613870 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.9□□□□□ -0.5
PSMB3-208ENST00000613870 RPGRIP1LQ68CZ1 1315 aa11.89□□□□□ -0.51
PSMB3-208ENST00000613870 VGFO15240 615 aaPredicted RBP11.89□□□□□ -0.51
PSMB3-208ENST00000613870 C19orf44Q9H6X5 657 aa11.89□□□□□ -0.51
PSMB3-208ENST00000613870 SETD1AO15047 1707 aaKnown RBP11.89□□□□□ -0.51
PSMB3-208ENST00000613870 C14orf37Q86TY3 774 aa11.88□□□□□ -0.51
PSMB3-208ENST00000613870 SPATA31E1Q6ZUB1 1445 aa11.87□□□□□ -0.51
PSMB3-208ENST00000613870 NBPF8Q3BBV2 869 aa11.87□□□□□ -0.51
PSMB3-208ENST00000613870 CADPS2Q86UW7 1296 aa11.86□□□□□ -0.51
PSMB3-208ENST00000613870 ZNF316A6NFI3 1004 aaPredicted RBP11.85□□□□□ -0.51
PSMB3-208ENST00000613870 ATF3P18847 181 aa11.85□□□□□ -0.51
PSMB3-208ENST00000613870 IFT172Q9UG01 1749 aa11.85□□□□□ -0.51
PSMB3-208ENST00000613870 PHLPP1O60346 1717 aa11.84□□□□□ -0.51
PSMB3-208ENST00000613870 STAC3Q96MF2 364 aa11.84□□□□□ -0.51
PSMB3-208ENST00000613870 ADGRF5Q8IZF2 1346 aa11.84□□□□□ -0.51
PSMB3-208ENST00000613870 DCCP43146 1447 aa11.83□□□□□ -0.52
PSMB3-208ENST00000613870 SOCS7O14512 581 aa11.82□□□□□ -0.52
PSMB3-208ENST00000613870 CARD11Q9BXL7 1154 aa11.82□□□□□ -0.52
PSMB3-208ENST00000613870 NALCNQ8IZF0 1738 aa11.82□□□□□ -0.52
PSMB3-208ENST00000613870 ROCK2O75116 1388 aaKnown RBP11.81□□□□□ -0.52
PSMB3-208ENST00000613870 ROBO2Q9HCK4 1378 aa11.81□□□□□ -0.52
PSMB3-208ENST00000613870 PRAG1Q86YV5 1406 aa11.81□□□□□ -0.52
PSMB3-208ENST00000613870 ADGRL3Q9HAR2 1447 aa11.81□□□□□ -0.52
PSMB3-208ENST00000613870 EIF4G2P78344 907 aaKnown RBP eCLIP11.81□□□□□ -0.52
PSMB3-208ENST00000613870 BRINP3Q76B58 766 aa11.81□□□□□ -0.52
PSMB3-208ENST00000613870 HIRIP3Q9BW71 556 aaPredicted RBP11.81□□□□□ -0.52
PSMB3-208ENST00000613870 COL16A1Q07092 1604 aaPredicted RBP11.81□□□□□ -0.52
PSMB3-208ENST00000613870 MST1RQ04912 1400 aa11.8□□□□□ -0.52
PSMB3-208ENST00000613870 PTCH1Q13635 1447 aa11.8□□□□□ -0.52
PSMB3-208ENST00000613870 PHF23Q9BUL5 403 aaPredicted RBP11.8□□□□□ -0.52
PSMB3-208ENST00000613870 RGS17Q9UGC6 210 aaPredicted RBP11.8□□□□□ -0.52
PSMB3-208ENST00000613870 AHDC1Q5TGY3 1603 aaPredicted RBP11.79□□□□□ -0.52
PSMB3-208ENST00000613870 JCADQ9P266 1359 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms