RNA–Protein interactions for RNA: ENST00000612899.4

TNFAIP3-206, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFAIP3, Length 4,735 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-206ENST00000612899 FOXD4L4Q8WXT5 416 aaPredicted RBP15.51■□□□□ 0.07
TNFAIP3-206ENST00000612899 HMOX1P09601 288 aa15.51■□□□□ 0.07
TNFAIP3-206ENST00000612899 PTMSP20962 102 aa15.51■□□□□ 0.07
TNFAIP3-206ENST00000612899 ST18O60284 1047 aa15.51■□□□□ 0.07
TNFAIP3-206ENST00000612899 NBPF8Q3BBV2 869 aa15.51■□□□□ 0.07
TNFAIP3-206ENST00000612899 C1orf141Q5JVX7 400 aa15.51■□□□□ 0.07
TNFAIP3-206ENST00000612899 DDX19BQ9UMR2 479 aa15.5■□□□□ 0.07
TNFAIP3-206ENST00000612899 GOLGA6L3A6NEY3 463 aa15.5■□□□□ 0.07
TNFAIP3-206ENST00000612899 HSP90B1P14625 803 aaKnown RBP15.5■□□□□ 0.07
TNFAIP3-206ENST00000612899 A0A0U1RQG5 324 aaPredicted RBP15.49■□□□□ 0.07
TNFAIP3-206ENST00000612899 SYAP1Q96A49 352 aaPredicted RBP15.49■□□□□ 0.07
TNFAIP3-206ENST00000612899 CDCA7LQ96GN5 454 aa15.49■□□□□ 0.07
TNFAIP3-206ENST00000612899 MIA2Q96PC5 1412 aa15.49■□□□□ 0.07
TNFAIP3-206ENST00000612899 MTHFSP49914 203 aa15.48■□□□□ 0.07
TNFAIP3-206ENST00000612899 HTATSF1O43719 755 aaKnown RBP15.47■□□□□ 0.07
TNFAIP3-206ENST00000612899 FANCIQ9NVI1 1328 aa15.47■□□□□ 0.07
TNFAIP3-206ENST00000612899 PRG4Q92954 1404 aaPredicted RBP15.47■□□□□ 0.07
TNFAIP3-206ENST00000612899 USP35Q9P2H5 1018 aa15.46■□□□□ 0.07
TNFAIP3-206ENST00000612899 GTF2E1P29083 439 aaPredicted RBP15.46■□□□□ 0.07
TNFAIP3-206ENST00000612899 PANK1Q8TE04 598 aa15.46■□□□□ 0.06
TNFAIP3-206ENST00000612899 API5Q9BZZ5 524 aaKnown RBP15.46■□□□□ 0.06
TNFAIP3-206ENST00000612899 PSME1Q06323 249 aa15.45■□□□□ 0.06
TNFAIP3-206ENST00000612899 KIAA2012Q0VF49 1180 aa15.45■□□□□ 0.06
TNFAIP3-206ENST00000612899 FKBP5Q13451 457 aaPredicted RBP15.45■□□□□ 0.06
TNFAIP3-206ENST00000612899 TOMM22Q9NS69 142 aa15.45■□□□□ 0.06
TNFAIP3-206ENST00000612899 ARHGAP5Q13017 1502 aa15.45■□□□□ 0.06
TNFAIP3-206ENST00000612899 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.44■□□□□ 0.06
TNFAIP3-206ENST00000612899 C9orf78Q9NZ63 289 aaPredicted RBP15.44■□□□□ 0.06
TNFAIP3-206ENST00000612899 BRD4O60885 1362 aaPredicted RBP15.44■□□□□ 0.06
TNFAIP3-206ENST00000612899 FOXD4L6Q3SYB3 417 aaPredicted RBP15.44■□□□□ 0.06
TNFAIP3-206ENST00000612899 FOXD4L3Q6VB84 417 aaPredicted RBP15.44■□□□□ 0.06
TNFAIP3-206ENST00000612899 TCP11L2Q8N4U5 519 aa15.44■□□□□ 0.06
TNFAIP3-206ENST00000612899 KIF16BQ96L93 1317 aa15.44■□□□□ 0.06
TNFAIP3-206ENST00000612899 SYNJ2O15056 1496 aa15.44■□□□□ 0.06
TNFAIP3-206ENST00000612899 POLA1P09884 1462 aaPredicted RBP15.44■□□□□ 0.06
TNFAIP3-206ENST00000612899 LNPKQ9C0E8 428 aa15.43■□□□□ 0.06
TNFAIP3-206ENST00000612899 FRAT2O75474 233 aaPredicted RBP15.43■□□□□ 0.06
TNFAIP3-206ENST00000612899 TOPBP1Q92547 1522 aa15.42■□□□□ 0.06
TNFAIP3-206ENST00000612899 NUTM2GQ5VZR2 741 aa15.42■□□□□ 0.06
TNFAIP3-206ENST00000612899 PPP2R1AP30153 589 aa15.42■□□□□ 0.06
TNFAIP3-206ENST00000612899 GNAI1P63096 354 aa15.42■□□□□ 0.06
TNFAIP3-206ENST00000612899 NEXNQ0ZGT2 675 aa15.42■□□□□ 0.06
TNFAIP3-206ENST00000612899 SLC12A5Q9H2X9 1139 aa15.42■□□□□ 0.06
TNFAIP3-206ENST00000612899 TTC5Q8N0Z6 440 aa15.42■□□□□ 0.06
TNFAIP3-206ENST00000612899 EVA1CP58658 441 aa15.41■□□□□ 0.06
TNFAIP3-206ENST00000612899 TSPYL4Q9UJ04 414 aa15.41■□□□□ 0.06
TNFAIP3-206ENST00000612899 C9orf84Q5VXU9 1444 aa15.4■□□□□ 0.06
TNFAIP3-206ENST00000612899 DDX49Q9Y6V7 483 aaKnown RBP15.4■□□□□ 0.06
TNFAIP3-206ENST00000612899 HFM1A2PYH4 1435 aa15.4■□□□□ 0.06
TNFAIP3-206ENST00000612899 TOP2BQ02880 1626 aa15.39■□□□□ 0.05
TNFAIP3-206ENST00000612899 NLRP6P59044 892 aa15.39■□□□□ 0.05
TNFAIP3-206ENST00000612899 DIAPH3Q9NSV4 1193 aa15.39■□□□□ 0.05
TNFAIP3-206ENST00000612899 TROQ12816 1431 aaPredicted RBP15.39■□□□□ 0.05
TNFAIP3-206ENST00000612899 KIAA1107Q9UPP5 1409 aa15.39■□□□□ 0.05
TNFAIP3-206ENST00000612899 SCAPERQ9BY12 1400 aa15.38■□□□□ 0.05
TNFAIP3-206ENST00000612899 REC8O95072 547 aa15.38■□□□□ 0.05
TNFAIP3-206ENST00000612899 DDX11L8A8MPP1 907 aa15.37■□□□□ 0.05
TNFAIP3-206ENST00000612899 CLSTN1O94985 981 aa15.37■□□□□ 0.05
TNFAIP3-206ENST00000612899 CCDC184Q52MB2 194 aa15.37■□□□□ 0.05
TNFAIP3-206ENST00000612899 CSPP1Q1MSJ5 1256 aa15.37■□□□□ 0.05
TNFAIP3-206ENST00000612899 PRAM1Q96QH2 718 aa15.37■□□□□ 0.05
TNFAIP3-206ENST00000612899 EFCAB5A4FU69 1503 aa15.37■□□□□ 0.05
TNFAIP3-206ENST00000612899 TMX4Q9H1E5 349 aaPredicted RBP15.36■□□□□ 0.05
TNFAIP3-206ENST00000612899 SF3A1Q15459 793 aaKnown RBP15.36■□□□□ 0.05
TNFAIP3-206ENST00000612899 KIF3AQ9Y496 699 aa15.36■□□□□ 0.05
TNFAIP3-206ENST00000612899 ANO2Q9NQ90 1003 aa15.36■□□□□ 0.05
TNFAIP3-206ENST00000612899 PNISRQ8TF01 805 aaKnown RBP15.35■□□□□ 0.05
TNFAIP3-206ENST00000612899 ARID3AQ99856 593 aa15.35■□□□□ 0.05
TNFAIP3-206ENST00000612899 PRKAR2BP31323 418 aa15.35■□□□□ 0.05
TNFAIP3-206ENST00000612899 AMER1Q5JTC6 1135 aaPredicted RBP15.35■□□□□ 0.05
TNFAIP3-206ENST00000612899 IFIT2P09913 472 aaKnown RBP15.35■□□□□ 0.05
TNFAIP3-206ENST00000612899 MRC2Q9UBG0 1479 aa15.35■□□□□ 0.05
TNFAIP3-206ENST00000612899 SYTL4Q96C24 671 aaPredicted RBP15.34■□□□□ 0.05
TNFAIP3-206ENST00000612899 TIAM1Q13009 1591 aa15.34■□□□□ 0.05
TNFAIP3-206ENST00000612899 EHBP1L1Q8N3D4 1523 aa15.34■□□□□ 0.05
TNFAIP3-206ENST00000612899 DDX58O95786 925 aaKnown RBP15.34■□□□□ 0.05
TNFAIP3-206ENST00000612899 GSE1Q14687 1217 aa15.34■□□□□ 0.05
TNFAIP3-206ENST00000612899 RAPGEF4Q8WZA2 1011 aa15.34■□□□□ 0.05
TNFAIP3-206ENST00000612899 CCDC34Q96HJ3 373 aa15.34■□□□□ 0.05
TNFAIP3-206ENST00000612899 H3BQV1 296 aa15.33■□□□□ 0.05
TNFAIP3-206ENST00000612899 RAPGEF3O95398 923 aa15.33■□□□□ 0.05
TNFAIP3-206ENST00000612899 EXOSC9Q06265 439 aaKnown RBP15.33■□□□□ 0.05
TNFAIP3-206ENST00000612899 IFFO2Q5TF58 517 aa15.33■□□□□ 0.05
TNFAIP3-206ENST00000612899 TXNDC2Q86VQ3 553 aa15.33■□□□□ 0.05
TNFAIP3-206ENST00000612899 FAM184AQ8NB25 1140 aa15.33■□□□□ 0.05
TNFAIP3-206ENST00000612899 RASSF8Q8NHQ8 419 aa15.33■□□□□ 0.05
TNFAIP3-206ENST00000612899 IFT140Q96RY7 1462 aa15.33■□□□□ 0.04
TNFAIP3-206ENST00000612899 RUFY2Q8WXA3 655 aa15.32■□□□□ 0.04
TNFAIP3-206ENST00000612899 NLRP2Q9NX02 1062 aa15.32■□□□□ 0.04
TNFAIP3-206ENST00000612899 ZKSCAN1P17029 563 aaPredicted RBP15.32■□□□□ 0.04
TNFAIP3-206ENST00000612899 G3V3G9 751 aa15.32■□□□□ 0.04
TNFAIP3-206ENST00000612899 DCAF8Q5TAQ9 597 aa15.32■□□□□ 0.04
TNFAIP3-206ENST00000612899 ROCK1Q13464 1354 aa15.32■□□□□ 0.04
TNFAIP3-206ENST00000612899 G3BP1Q13283 466 aaKnown RBP eCLIP15.31■□□□□ 0.04
TNFAIP3-206ENST00000612899 SNAPC4Q5SXM2 1469 aa15.31■□□□□ 0.04
TNFAIP3-206ENST00000612899 PHF14O94880 888 aa15.31■□□□□ 0.04
TNFAIP3-206ENST00000612899 TPM4P67936 248 aa15.31■□□□□ 0.04
TNFAIP3-206ENST00000612899 AIMP1Q12904 312 aaKnown RBP15.31■□□□□ 0.04
TNFAIP3-206ENST00000612899 CC2D2AQ9P2K1 1620 aa15.31■□□□□ 0.04
TNFAIP3-206ENST00000612899 TSR2Q969E8 191 aaKnown RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms