RNA–Protein interactions for RNA: ENST00000612674.1

USP12-202, Transcript of ubiquitin specific peptidase 12, humanhuman

TSL 2

Gene USP12, Length 712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP12-202ENST00000612674 SLF2Q8IX21 1173 aa12.15□□□□□ -0.46
USP12-202ENST00000612674 EYA1Q99502 592 aa12.15□□□□□ -0.46
USP12-202ENST00000612674 RTN4Q9NQC3 1192 aaKnown RBP12.15□□□□□ -0.46
USP12-202ENST00000612674 COPS2P61201 443 aa12.14□□□□□ -0.47
USP12-202ENST00000612674 NECTIN2Q92692 538 aa12.13□□□□□ -0.47
USP12-202ENST00000612674 THOC2Q8NI27 1593 aaKnown RBP12.12□□□□□ -0.47
USP12-202ENST00000612674 SLC24A1O60721 1099 aa12.1□□□□□ -0.47
USP12-202ENST00000612674 MLLT3P42568 568 aaPredicted RBP12.09□□□□□ -0.47
USP12-202ENST00000612674 NCAPD3P42695 1498 aa12.08□□□□□ -0.47
USP12-202ENST00000612674 NESP48681 1621 aa12.08□□□□□ -0.48
USP12-202ENST00000612674 ZPR1O75312 459 aa12.08□□□□□ -0.48
USP12-202ENST00000612674 GGCXP38435 758 aa12.06□□□□□ -0.48
USP12-202ENST00000612674 PDZRN3Q9UPQ7 1066 aa12.06□□□□□ -0.48
USP12-202ENST00000612674 SLC4A3P48751 1232 aa12.05□□□□□ -0.48
USP12-202ENST00000612674 ARHGEF1Q92888 912 aaKnown RBP12.05□□□□□ -0.48
USP12-202ENST00000612674 TMUB1Q9BVT8 246 aa12.05□□□□□ -0.48
USP12-202ENST00000612674 PTGDRQ13258 359 aa12.04□□□□□ -0.48
USP12-202ENST00000612674 PCDHB3Q9Y5E6 796 aa12.04□□□□□ -0.48
USP12-202ENST00000612674 BLOC1S3Q6QNY0 202 aa12.02□□□□□ -0.49
USP12-202ENST00000612674 PRR14Q9BWN1 585 aa12.02□□□□□ -0.49
USP12-202ENST00000612674 KCNV2Q8TDN2 545 aa12.01□□□□□ -0.49
USP12-202ENST00000612674 SMARCA2P51531 1590 aa12.01□□□□□ -0.49
USP12-202ENST00000612674 DNAJB2P25686 324 aa12□□□□□ -0.49
USP12-202ENST00000612674 EMID1Q96A84 441 aaPredicted RBP12□□□□□ -0.49
USP12-202ENST00000612674 TSHZ2Q9NRE2 1034 aa12□□□□□ -0.49
USP12-202ENST00000612674 HMGXB3Q12766 1538 aa12□□□□□ -0.49
USP12-202ENST00000612674 KIF21AQ7Z4S6 1674 aa12□□□□□ -0.49
USP12-202ENST00000612674 RNF223E7ERA6 249 aa11.99□□□□□ -0.49
USP12-202ENST00000612674 TMEM134Q9H6X4 195 aa11.99□□□□□ -0.49
USP12-202ENST00000612674 ADGRG1Q9Y653 693 aa11.99□□□□□ -0.49
USP12-202ENST00000612674 ATAD2BQ9ULI0 1458 aa11.98□□□□□ -0.49
USP12-202ENST00000612674 TRIM67Q6ZTA4 783 aa11.98□□□□□ -0.49
USP12-202ENST00000612674 RBM46Q8TBY0 533 aaKnown RBP11.97□□□□□ -0.49
USP12-202ENST00000612674 TLL1O43897 1013 aa11.96□□□□□ -0.49
USP12-202ENST00000612674 FAM161AQ3B820 660 aa11.96□□□□□ -0.49
USP12-202ENST00000612674 LAMC3Q9Y6N6 1575 aa11.96□□□□□ -0.5
USP12-202ENST00000612674 SLC19A1P41440 591 aa11.95□□□□□ -0.5
USP12-202ENST00000612674 RCCD1A6NED2 376 aa11.94□□□□□ -0.5
USP12-202ENST00000612674 ACTN4O43707 911 aaKnown RBP11.94□□□□□ -0.5
USP12-202ENST00000612674 ZNF787Q6DD87 383 aa11.94□□□□□ -0.5
USP12-202ENST00000612674 BAZ1AQ9NRL2 1556 aaPredicted RBP11.92□□□□□ -0.5
USP12-202ENST00000612674 NUTM2FA1L443 756 aa11.92□□□□□ -0.5
USP12-202ENST00000612674 PPEF1O14829 653 aaPredicted RBP11.91□□□□□ -0.5
USP12-202ENST00000612674 CFHP08603 1231 aa11.91□□□□□ -0.5
USP12-202ENST00000612674 SLC10A3P09131 477 aa11.91□□□□□ -0.5
USP12-202ENST00000612674 SPRYD7Q5W111 196 aa11.91□□□□□ -0.5
USP12-202ENST00000612674 S1PR4O95977 384 aa11.9□□□□□ -0.5
USP12-202ENST00000612674 KMT5BQ4FZB7 885 aa11.9□□□□□ -0.5
USP12-202ENST00000612674 ANKLE1Q8NAG6 615 aa11.9□□□□□ -0.5
USP12-202ENST00000612674 SMARCA4P51532 1647 aa11.89□□□□□ -0.51
USP12-202ENST00000612674 LIAT1Q6ZQX7 453 aa11.88□□□□□ -0.51
USP12-202ENST00000612674 ZNF598Q86UK7 904 aaKnown RBP11.88□□□□□ -0.51
USP12-202ENST00000612674 BAZ1BQ9UIG0 1483 aaKnown RBP11.87□□□□□ -0.51
USP12-202ENST00000612674 PDS5BQ9NTI5 1447 aa11.86□□□□□ -0.51
USP12-202ENST00000612674 FCHSD2O94868 740 aa11.85□□□□□ -0.51
USP12-202ENST00000612674 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.84□□□□□ -0.51
USP12-202ENST00000612674 ADH1BP00325 375 aa11.84□□□□□ -0.51
USP12-202ENST00000612674 PRR20EP86478 221 aa11.84□□□□□ -0.51
USP12-202ENST00000612674 PRR20CP86479 221 aa11.84□□□□□ -0.51
USP12-202ENST00000612674 PRR20DP86480 221 aa11.84□□□□□ -0.51
USP12-202ENST00000612674 PRR20BP86481 221 aa11.84□□□□□ -0.51
USP12-202ENST00000612674 PRR20AP86496 221 aa11.84□□□□□ -0.51
USP12-202ENST00000612674 ZNF775Q96BV0 537 aaPredicted RBP11.84□□□□□ -0.51
USP12-202ENST00000612674 SEMA3EO15041 775 aa11.83□□□□□ -0.52
USP12-202ENST00000612674 MYT1Q01538 1121 aa11.83□□□□□ -0.52
USP12-202ENST00000612674 PXYLP1Q8TE99 480 aa11.83□□□□□ -0.52
USP12-202ENST00000612674 NR1I2O75469 434 aa11.82□□□□□ -0.52
USP12-202ENST00000612674 PKDCCQ504Y2 493 aa11.82□□□□□ -0.52
USP12-202ENST00000612674 PLA2G2CQ5R387 149 aa11.82□□□□□ -0.52
USP12-202ENST00000612674 ZNF697Q5TEC3 545 aa11.82□□□□□ -0.52
USP12-202ENST00000612674 DGAT1O75907 488 aa11.81□□□□□ -0.52
USP12-202ENST00000612674 MRC2Q9UBG0 1479 aa11.81□□□□□ -0.52
USP12-202ENST00000612674 WDR62O43379 1518 aa11.81□□□□□ -0.52
USP12-202ENST00000612674 GDF9O60383 454 aa11.8□□□□□ -0.52
USP12-202ENST00000612674 SCUBE3Q8IX30 993 aa11.8□□□□□ -0.52
USP12-202ENST00000612674 SLC6A16Q9GZN6 736 aa11.8□□□□□ -0.52
USP12-202ENST00000612674 RIMBP3CA6NJZ7 1639 aa11.79□□□□□ -0.52
USP12-202ENST00000612674 RIMBP3BA6NNM3 1639 aa11.79□□□□□ -0.52
USP12-202ENST00000612674 RIMBP3Q9UFD9 1639 aa11.79□□□□□ -0.52
USP12-202ENST00000612674 TNFRSF10AO00220 468 aa11.79□□□□□ -0.52
USP12-202ENST00000612674 OATP04181 439 aa11.79□□□□□ -0.52
USP12-202ENST00000612674 PUS10Q3MIT2 529 aaKnown RBP11.78□□□□□ -0.52
USP12-202ENST00000612674 POTECB2RU33 542 aa11.77□□□□□ -0.53
USP12-202ENST00000612674 METTL3Q86U44 580 aaKnown RBP11.77□□□□□ -0.53
USP12-202ENST00000612674 P3H3Q8IVL6 736 aa11.77□□□□□ -0.53
USP12-202ENST00000612674 PEG3Q9GZU2 1588 aa11.75□□□□□ -0.53
USP12-202ENST00000612674 FAM187AA6NFU0 413 aa11.75□□□□□ -0.53
USP12-202ENST00000612674 HIC1Q14526 733 aa11.75□□□□□ -0.53
USP12-202ENST00000612674 SPSB2Q99619 263 aa11.73□□□□□ -0.53
USP12-202ENST00000612674 FECHP22830 423 aa11.72□□□□□ -0.53
USP12-202ENST00000612674 RBM26Q5T8P6 1007 aaKnown RBP11.72□□□□□ -0.53
USP12-202ENST00000612674 RSPH4AQ5TD94 716 aa11.71□□□□□ -0.53
USP12-202ENST00000612674 PKD2L1Q9P0L9 805 aa11.7□□□□□ -0.54
USP12-202ENST00000612674 CADPSQ9ULU8 1353 aa11.68□□□□□ -0.54
USP12-202ENST00000612674 TESPA1A2RU30 521 aaPredicted RBP11.68□□□□□ -0.54
USP12-202ENST00000612674 ST8SIA5O15466 376 aa11.68□□□□□ -0.54
USP12-202ENST00000612674 MORN1Q5T089 497 aa11.68□□□□□ -0.54
USP12-202ENST00000612674 ARHGEF11O15085 1522 aa11.67□□□□□ -0.54
USP12-202ENST00000612674 GNPATO15228 680 aa11.67□□□□□ -0.54
USP12-202ENST00000612674 FOXC1Q12948 553 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms