RNA–Protein interactions for RNA: ENST00000612155.1

SRRM3-205, Transcript of serine/arginine repetitive matrix 3, humanhuman

TSL 1 (best)

Gene SRRM3, Length 2,150 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3-205ENST00000612155 UHRF1BP1Q6BDS2 1440 aa27.78■■■□□ 2.04
SRRM3-205ENST00000612155 YTHDC1Q96MU7 727 aaKnown RBP27.75■■■□□ 2.03
SRRM3-205ENST00000612155 HSPA2P54652 639 aa27.73■■■□□ 2.03
SRRM3-205ENST00000612155 ADGRF5Q8IZF2 1346 aa27.72■■■□□ 2.03
SRRM3-205ENST00000612155 NEXMIFQ5QGS0 1516 aa27.72■■■□□ 2.03
SRRM3-205ENST00000612155 NBPF8Q3BBV2 869 aa27.72■■■□□ 2.03
SRRM3-205ENST00000612155 ZNF142P52746 1687 aaPredicted RBP27.71■■■□□ 2.03
SRRM3-205ENST00000612155 CENPBP07199 599 aaPredicted RBP27.71■■■□□ 2.03
SRRM3-205ENST00000612155 THEMISQ8N1K5 641 aaPredicted RBP27.71■■■□□ 2.03
SRRM3-205ENST00000612155 RIMS2Q9UQ26 1411 aa27.71■■■□□ 2.03
SRRM3-205ENST00000612155 TMEM2Q9UHN6 1383 aa27.7■■■□□ 2.02
SRRM3-205ENST00000612155 PPLO60437 1756 aa27.7■■■□□ 2.02
SRRM3-205ENST00000612155 NEURL4Q96JN8 1562 aa27.69■■■□□ 2.02
SRRM3-205ENST00000612155 LTKP29376 864 aa27.69■■■□□ 2.02
SRRM3-205ENST00000612155 IFT172Q9UG01 1749 aa27.69■■■□□ 2.02
SRRM3-205ENST00000612155 ZFYVE9O95405 1425 aa27.67■■■□□ 2.02
SRRM3-205ENST00000612155 KDM5AP29375 1690 aaKnown RBP27.67■■■□□ 2.02
SRRM3-205ENST00000612155 RPGRIP1LQ68CZ1 1315 aa27.66■■■□□ 2.02
SRRM3-205ENST00000612155 LMTK3Q96Q04 1460 aa27.65■■■□□ 2.02
SRRM3-205ENST00000612155 DDX10Q13206 875 aaKnown RBP27.65■■■□□ 2.02
SRRM3-205ENST00000612155 TXNDC2Q86VQ3 553 aa27.65■■■□□ 2.02
SRRM3-205ENST00000612155 VGFO15240 615 aaPredicted RBP27.62■■■□□ 2.01
SRRM3-205ENST00000612155 PRAG1Q86YV5 1406 aa27.61■■■□□ 2.01
SRRM3-205ENST00000612155 SLIT1O75093 1534 aa27.6■■■□□ 2.01
SRRM3-205ENST00000612155 ARHGAP23Q9P227 1491 aa27.6■■■□□ 2.01
SRRM3-205ENST00000612155 BCANQ96GW7 911 aa27.6■■■□□ 2.01
SRRM3-205ENST00000612155 EID1Q9Y6B2 187 aa27.59■■■□□ 2.01
SRRM3-205ENST00000612155 NCKAP5LQ9HCH0 1330 aa27.59■■■□□ 2.01
SRRM3-205ENST00000612155 MYOM2P54296 1465 aa27.59■■■□□ 2.01
SRRM3-205ENST00000612155 CFAP70Q5T0N1 1121 aa27.58■■■□□ 2.01
SRRM3-205ENST00000612155 NBPF1Q3BBV0 1214 aa27.57■■■□□ 2
SRRM3-205ENST00000612155 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.56■■■□□ 2
SRRM3-205ENST00000612155 ANKLE2Q86XL3 938 aa27.55■■■□□ 2
SRRM3-205ENST00000612155 PELP1Q8IZL8 1130 aaKnown RBP27.55■■■□□ 2
SRRM3-205ENST00000612155 PIK3C2GO75747 1445 aa27.54■■■□□ 2
SRRM3-205ENST00000612155 SCAF11Q99590 1463 aaKnown RBP27.54■■■□□ 2
SRRM3-205ENST00000612155 NRXN1Q9ULB1 1477 aa27.54■■■□□ 2
SRRM3-205ENST00000612155 HDGFP51858 240 aaKnown RBP27.53■■■□□ 2
SRRM3-205ENST00000612155 AEBP2Q6ZN18 517 aaPredicted RBP27.53■■■□□ 2
SRRM3-205ENST00000612155 SLC26A8Q96RN1 970 aa27.52■■■□□ 2
SRRM3-205ENST00000612155 TMEM132EQ6IEE7 984 aa27.51■■□□□ 1.99
SRRM3-205ENST00000612155 HSPA5P11021 654 aaKnown RBP27.5■■□□□ 1.99
SRRM3-205ENST00000612155 IQGAP1P46940 1657 aa27.49■■□□□ 1.99
SRRM3-205ENST00000612155 STAC3Q96MF2 364 aa27.49■■□□□ 1.99
SRRM3-205ENST00000612155 TRPM1Q7Z4N2 1603 aa27.48■■□□□ 1.99
SRRM3-205ENST00000612155 NRXN3Q9Y4C0 1643 aa27.48■■□□□ 1.99
SRRM3-205ENST00000612155 PLEKHG1Q9ULL1 1385 aa27.47■■□□□ 1.99
SRRM3-205ENST00000612155 C14orf93Q9H972 538 aaKnown RBP27.46■■□□□ 1.99
SRRM3-205ENST00000612155 ROCK2O75116 1388 aaKnown RBP27.46■■□□□ 1.99
SRRM3-205ENST00000612155 POLR1AO95602 1720 aaPredicted RBP27.45■■□□□ 1.98
SRRM3-205ENST00000612155 ALKQ9UM73 1620 aa27.45■■□□□ 1.98
SRRM3-205ENST00000612155 GTF3C3Q9Y5Q9 886 aa27.43■■□□□ 1.98
SRRM3-205ENST00000612155 ADAMTS13Q76LX8 1427 aa27.43■■□□□ 1.98
SRRM3-205ENST00000612155 RALGAPBQ86X10 1494 aa27.43■■□□□ 1.98
SRRM3-205ENST00000612155 CARD11Q9BXL7 1154 aa27.42■■□□□ 1.98
SRRM3-205ENST00000612155 STRCQ7RTU9 1775 aa27.41■■□□□ 1.98
SRRM3-205ENST00000612155 NPHP4O75161 1426 aaPredicted RBP27.41■■□□□ 1.98
SRRM3-205ENST00000612155 SETBP1Q9Y6X0 1596 aa27.41■■□□□ 1.98
SRRM3-205ENST00000612155 METP08581 1390 aa27.41■■□□□ 1.98
SRRM3-205ENST00000612155 EIF4G2P78344 907 aaKnown RBP eCLIP27.4■■□□□ 1.98
SRRM3-205ENST00000612155 STK26Q9P289 416 aa27.4■■□□□ 1.98
SRRM3-205ENST00000612155 ASXL1Q8IXJ9 1541 aa27.39■■□□□ 1.98
SRRM3-205ENST00000612155 WASHC2AQ641Q2 1341 aa27.39■■□□□ 1.97
SRRM3-205ENST00000612155 SETD1AO15047 1707 aaKnown RBP27.38■■□□□ 1.97
SRRM3-205ENST00000612155 ADGRB1O14514 1584 aa27.36■■□□□ 1.97
SRRM3-205ENST00000612155 MED14O60244 1454 aa27.35■■□□□ 1.97
SRRM3-205ENST00000612155 TRAK1Q9UPV9 953 aa27.35■■□□□ 1.97
SRRM3-205ENST00000612155 KIAA1210Q9ULL0 1709 aa27.35■■□□□ 1.97
SRRM3-205ENST00000612155 C11orf95C9JLR9 678 aaPredicted RBP27.34■■□□□ 1.97
SRRM3-205ENST00000612155 LAMC1P11047 1609 aa27.33■■□□□ 1.96
SRRM3-205ENST00000612155 GPRASP1Q5JY77 1395 aa27.31■■□□□ 1.96
SRRM3-205ENST00000612155 TBX22Q9Y458 520 aa27.31■■□□□ 1.96
SRRM3-205ENST00000612155 PTPRUQ92729 1446 aa27.3■■□□□ 1.96
SRRM3-205ENST00000612155 USP47Q96K76 1375 aa27.28■■□□□ 1.96
SRRM3-205ENST00000612155 YTHDC2Q9H6S0 1430 aaKnown RBP27.28■■□□□ 1.96
SRRM3-205ENST00000612155 SAFB2Q14151 953 aaKnown RBP eCLIP27.26■■□□□ 1.96
SRRM3-205ENST00000612155 AMOTL2Q9Y2J4 779 aa27.25■■□□□ 1.95
SRRM3-205ENST00000612155 ANP32CO43423 234 aa27.25■■□□□ 1.95
SRRM3-205ENST00000612155 ST20-MTHFSA0A0A6YYL1 179 aa27.24■■□□□ 1.95
SRRM3-205ENST00000612155 RBM33Q96EV2 1170 aaKnown RBP27.24■■□□□ 1.95
SRRM3-205ENST00000612155 DIP2AQ14689 1571 aa27.23■■□□□ 1.95
SRRM3-205ENST00000612155 CCDC7Q96M83 1385 aa27.23■■□□□ 1.95
SRRM3-205ENST00000612155 WAPLQ7Z5K2 1190 aa27.22■■□□□ 1.95
SRRM3-205ENST00000612155 KCNA6P17658 529 aa27.22■■□□□ 1.95
SRRM3-205ENST00000612155 CCER2I3L3R5 266 aa27.21■■□□□ 1.95
SRRM3-205ENST00000612155 LRPPRCP42704 1394 aaKnown RBP27.21■■□□□ 1.95
SRRM3-205ENST00000612155 PLEKHH1Q9ULM0 1364 aa27.2■■□□□ 1.94
SRRM3-205ENST00000612155 PRAM1Q96QH2 718 aa27.19■■□□□ 1.94
SRRM3-205ENST00000612155 ROBO2Q9HCK4 1378 aa27.18■■□□□ 1.94
SRRM3-205ENST00000612155 ARHGEF28Q8N1W1 1705 aaKnown RBP27.17■■□□□ 1.94
SRRM3-205ENST00000612155 ZNF335Q9H4Z2 1342 aaPredicted RBP27.17■■□□□ 1.94
SRRM3-205ENST00000612155 CHD2O14647 1828 aaKnown RBP27.16■■□□□ 1.94
SRRM3-205ENST00000612155 ABCC11Q96J66 1382 aa27.16■■□□□ 1.94
SRRM3-205ENST00000612155 POGKQ9P215 609 aa27.15■■□□□ 1.94
SRRM3-205ENST00000612155 KIF7Q2M1P5 1343 aa27.14■■□□□ 1.94
SRRM3-205ENST00000612155 MYT1Q01538 1121 aa27.14■■□□□ 1.94
SRRM3-205ENST00000612155 STRCP1A6NGW2 1772 aa27.14■■□□□ 1.93
SRRM3-205ENST00000612155 PIK3R4Q99570 1358 aa27.12■■□□□ 1.93
SRRM3-205ENST00000612155 DMRT2Q9Y5R5 561 aa27.12■■□□□ 1.93
SRRM3-205ENST00000612155 XRN1Q8IZH2 1706 aaKnown RBP27.12■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms