RNA–Protein interactions for RNA: ENST00000612011.1

PVT1-221, Transcript of Pvt1 oncogene, humanhuman

Gene PVT1, Length 169 nt, Biotype misc RNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-221ENST00000612011 ZNF326Q5BKZ1 582 aaKnown RBP14.59□□□□□ -0.07
PVT1-221ENST00000612011 STAG3Q9UJ98 1225 aa14.59□□□□□ -0.07
PVT1-221ENST00000612011 DCAF11Q8TEB1 546 aa14.57□□□□□ -0.08
PVT1-221ENST00000612011 UHRF1BP1Q6BDS2 1440 aa14.57□□□□□ -0.08
PVT1-221ENST00000612011 SETD1AO15047 1707 aaKnown RBP14.56□□□□□ -0.08
PVT1-221ENST00000612011 PPP1R15AO75807 674 aaPredicted RBP14.56□□□□□ -0.08
PVT1-221ENST00000612011 KDM2AQ9Y2K7 1162 aa14.56□□□□□ -0.08
PVT1-221ENST00000612011 PRAG1Q86YV5 1406 aa14.55□□□□□ -0.08
PVT1-221ENST00000612011 SLIT1O75093 1534 aa14.55□□□□□ -0.08
PVT1-221ENST00000612011 RPGRIP1LQ68CZ1 1315 aa14.54□□□□□ -0.08
PVT1-221ENST00000612011 RIMS2Q9UQ26 1411 aa14.54□□□□□ -0.08
PVT1-221ENST00000612011 NRXN1Q9ULB1 1477 aa14.54□□□□□ -0.08
PVT1-221ENST00000612011 NRXN3Q9Y4C0 1643 aa14.54□□□□□ -0.08
PVT1-221ENST00000612011 ZFYVE9O95405 1425 aa14.53□□□□□ -0.08
PVT1-221ENST00000612011 RALGAPBQ86X10 1494 aa14.52□□□□□ -0.08
PVT1-221ENST00000612011 ARHGAP23Q9P227 1491 aa14.52□□□□□ -0.08
PVT1-221ENST00000612011 NBPF8Q3BBV2 869 aa14.5□□□□□ -0.09
PVT1-221ENST00000612011 STAC3Q96MF2 364 aa14.5□□□□□ -0.09
PVT1-221ENST00000612011 PIK3C2GO75747 1445 aa14.49□□□□□ -0.09
PVT1-221ENST00000612011 TMEM2Q9UHN6 1383 aa14.49□□□□□ -0.09
PVT1-221ENST00000612011 SETBP1Q9Y6X0 1596 aa14.49□□□□□ -0.09
PVT1-221ENST00000612011 ADGRF5Q8IZF2 1346 aa14.48□□□□□ -0.09
PVT1-221ENST00000612011 NUTM2DQ5VT03 806 aaPredicted RBP14.48□□□□□ -0.09
PVT1-221ENST00000612011 ALKQ9UM73 1620 aa14.48□□□□□ -0.09
PVT1-221ENST00000612011 ARHGEF28Q8N1W1 1705 aaKnown RBP14.47□□□□□ -0.09
PVT1-221ENST00000612011 SCAF11Q99590 1463 aaKnown RBP14.47□□□□□ -0.09
PVT1-221ENST00000612011 VGFO15240 615 aaPredicted RBP14.47□□□□□ -0.09
PVT1-221ENST00000612011 THEMISQ8N1K5 641 aaPredicted RBP14.47□□□□□ -0.09
PVT1-221ENST00000612011 KNDC1Q76NI1 1749 aa14.46□□□□□ -0.09
PVT1-221ENST00000612011 LMTK3Q96Q04 1460 aa14.46□□□□□ -0.09
PVT1-221ENST00000612011 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.46□□□□□ -0.09
PVT1-221ENST00000612011 STRCQ7RTU9 1775 aa14.46□□□□□ -0.09
PVT1-221ENST00000612011 DIP2AQ14689 1571 aa14.46□□□□□ -0.09
PVT1-221ENST00000612011 HDGFP51858 240 aaKnown RBP14.45□□□□□ -0.1
PVT1-221ENST00000612011 ASXL1Q8IXJ9 1541 aa14.44□□□□□ -0.1
PVT1-221ENST00000612011 ROCK2O75116 1388 aaKnown RBP14.44□□□□□ -0.1
PVT1-221ENST00000612011 EID1Q9Y6B2 187 aa14.43□□□□□ -0.1
PVT1-221ENST00000612011 PLEKHG1Q9ULL1 1385 aa14.43□□□□□ -0.1
PVT1-221ENST00000612011 CHD2O14647 1828 aaKnown RBP14.43□□□□□ -0.1
PVT1-221ENST00000612011 ADGRB1O14514 1584 aa14.43□□□□□ -0.1
PVT1-221ENST00000612011 QRICH2Q9H0J4 1663 aa14.42□□□□□ -0.1
PVT1-221ENST00000612011 TXNDC2Q86VQ3 553 aa14.41□□□□□ -0.1
PVT1-221ENST00000612011 SENP3Q9H4L4 574 aaPredicted RBP14.41□□□□□ -0.1
PVT1-221ENST00000612011 GPRASP1Q5JY77 1395 aa14.41□□□□□ -0.1
PVT1-221ENST00000612011 LTKP29376 864 aa14.4□□□□□ -0.1
PVT1-221ENST00000612011 CFAP70Q5T0N1 1121 aa14.39□□□□□ -0.11
PVT1-221ENST00000612011 NBPF1Q3BBV0 1214 aa14.38□□□□□ -0.11
PVT1-221ENST00000612011 ANKLE2Q86XL3 938 aa14.38□□□□□ -0.11
PVT1-221ENST00000612011 CARD11Q9BXL7 1154 aa14.38□□□□□ -0.11
PVT1-221ENST00000612011 C14orf93Q9H972 538 aaKnown RBP14.38□□□□□ -0.11
PVT1-221ENST00000612011 ADAMTS13Q76LX8 1427 aa14.38□□□□□ -0.11
PVT1-221ENST00000612011 XRN1Q8IZH2 1706 aaKnown RBP14.38□□□□□ -0.11
PVT1-221ENST00000612011 MED14O60244 1454 aa14.38□□□□□ -0.11
PVT1-221ENST00000612011 BCANQ96GW7 911 aa14.37□□□□□ -0.11
PVT1-221ENST00000612011 NPHP4O75161 1426 aaPredicted RBP14.37□□□□□ -0.11
PVT1-221ENST00000612011 USP47Q96K76 1375 aa14.36□□□□□ -0.11
PVT1-221ENST00000612011 CPS1P31327 1500 aa14.36□□□□□ -0.11
PVT1-221ENST00000612011 HSPA2P54652 639 aa14.35□□□□□ -0.11
PVT1-221ENST00000612011 NCKAP5LQ9HCH0 1330 aa14.34□□□□□ -0.11
PVT1-221ENST00000612011 STRCP1A6NGW2 1772 aa14.34□□□□□ -0.11
PVT1-221ENST00000612011 YTHDC2Q9H6S0 1430 aaKnown RBP14.33□□□□□ -0.11
PVT1-221ENST00000612011 DLC1Q96QB1 1528 aa14.33□□□□□ -0.12
PVT1-221ENST00000612011 EIF4G2P78344 907 aaKnown RBP eCLIP14.33□□□□□ -0.12
PVT1-221ENST00000612011 EIF3AQ14152 1382 aaKnown RBP14.33□□□□□ -0.12
PVT1-221ENST00000612011 NWD1Q149M9 1564 aa14.32□□□□□ -0.12
PVT1-221ENST00000612011 HSPA5P11021 654 aaKnown RBP14.32□□□□□ -0.12
PVT1-221ENST00000612011 TMEM132EQ6IEE7 984 aa14.32□□□□□ -0.12
PVT1-221ENST00000612011 METP08581 1390 aa14.31□□□□□ -0.12
PVT1-221ENST00000612011 SLC26A8Q96RN1 970 aa14.3□□□□□ -0.12
PVT1-221ENST00000612011 LRPPRCP42704 1394 aaKnown RBP14.29□□□□□ -0.12
PVT1-221ENST00000612011 NALCNQ8IZF0 1738 aa14.28□□□□□ -0.12
PVT1-221ENST00000612011 PTPRUQ92729 1446 aa14.28□□□□□ -0.12
PVT1-221ENST00000612011 PIK3R4Q99570 1358 aa14.28□□□□□ -0.12
PVT1-221ENST00000612011 HIRIP3Q9BW71 556 aaPredicted RBP14.28□□□□□ -0.12
PVT1-221ENST00000612011 TRAK1Q9UPV9 953 aa14.28□□□□□ -0.12
PVT1-221ENST00000612011 TBX22Q9Y458 520 aa14.28□□□□□ -0.12
PVT1-221ENST00000612011 XIRP1Q702N8 1843 aaKnown RBP14.27□□□□□ -0.12
PVT1-221ENST00000612011 TECPR2O15040 1411 aa14.27□□□□□ -0.12
PVT1-221ENST00000612011 STK26Q9P289 416 aa14.27□□□□□ -0.13
PVT1-221ENST00000612011 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.27□□□□□ -0.13
PVT1-221ENST00000612011 ZNF316A6NFI3 1004 aaPredicted RBP14.26□□□□□ -0.13
PVT1-221ENST00000612011 ABCC11Q96J66 1382 aa14.25□□□□□ -0.13
PVT1-221ENST00000612011 ST20-MTHFSA0A0A6YYL1 179 aa14.25□□□□□ -0.13
PVT1-221ENST00000612011 MYOM1P52179 1685 aa14.25□□□□□ -0.13
PVT1-221ENST00000612011 RGPD8O14715 1765 aaPredicted RBP14.24□□□□□ -0.13
PVT1-221ENST00000612011 CENPJQ9HC77 1338 aaPredicted RBP14.24□□□□□ -0.13
PVT1-221ENST00000612011 ADGRB2O60241 1585 aa14.24□□□□□ -0.13
PVT1-221ENST00000612011 PTCH1Q13635 1447 aa14.24□□□□□ -0.13
PVT1-221ENST00000612011 AEBP2Q6ZN18 517 aaPredicted RBP14.23□□□□□ -0.13
PVT1-221ENST00000612011 ITSN1Q15811 1721 aa14.23□□□□□ -0.13
PVT1-221ENST00000612011 FAM135BQ49AJ0 1406 aa14.23□□□□□ -0.13
PVT1-221ENST00000612011 NKTRP30414 1462 aaKnown RBP14.22□□□□□ -0.13
PVT1-221ENST00000612011 SBNO2Q9Y2G9 1366 aa14.22□□□□□ -0.13
PVT1-221ENST00000612011 FMN2Q9NZ56 1722 aa14.21□□□□□ -0.13
PVT1-221ENST00000612011 TULP4Q9NRJ4 1543 aa14.21□□□□□ -0.13
PVT1-221ENST00000612011 AMOTL2Q9Y2J4 779 aa14.21□□□□□ -0.13
PVT1-221ENST00000612011 ROBO2Q9HCK4 1378 aa14.21□□□□□ -0.14
PVT1-221ENST00000612011 PRAM1Q96QH2 718 aa14.2□□□□□ -0.14
PVT1-221ENST00000612011 POGKQ9P215 609 aa14.2□□□□□ -0.14
PVT1-221ENST00000612011 PLEKHH1Q9ULM0 1364 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms