RNA–Protein interactions for RNA: ENST00000611969.4

LINC00116-203, Transcript of Uncharacterized protein encoded by LINC00116, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LINC00116, Length 441 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116-203ENST00000611969 JCADQ9P266 1359 aa21.81■■□□□ 1.08
LINC00116-203ENST00000611969 DAPK1P53355 1430 aa21.8■■□□□ 1.08
LINC00116-203ENST00000611969 KANK1Q14678 1352 aa21.79■■□□□ 1.08
LINC00116-203ENST00000611969 SHPRHQ149N8 1683 aa21.78■■□□□ 1.08
LINC00116-203ENST00000611969 ZFYVE9O95405 1425 aa21.76■■□□□ 1.07
LINC00116-203ENST00000611969 SLAIN2Q9P270 581 aa21.76■■□□□ 1.07
LINC00116-203ENST00000611969 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.75■■□□□ 1.07
LINC00116-203ENST00000611969 AHDC1Q5TGY3 1603 aaPredicted RBP21.74■■□□□ 1.07
LINC00116-203ENST00000611969 TMEM131LA2VDJ0 1609 aa21.73■■□□□ 1.07
LINC00116-203ENST00000611969 PLEKHG1Q9ULL1 1385 aa21.71■■□□□ 1.07
LINC00116-203ENST00000611969 FGD6Q6ZV73 1430 aa21.71■■□□□ 1.07
LINC00116-203ENST00000611969 UPF1Q92900 1129 aaKnown RBP eCLIP21.7■■□□□ 1.06
LINC00116-203ENST00000611969 BCANQ96GW7 911 aa21.7■■□□□ 1.06
LINC00116-203ENST00000611969 DIP2AQ14689 1571 aa21.7■■□□□ 1.06
LINC00116-203ENST00000611969 TRIM52Q96A61 297 aa21.69■■□□□ 1.06
LINC00116-203ENST00000611969 RIMS2Q9UQ26 1411 aa21.68■■□□□ 1.06
LINC00116-203ENST00000611969 ANKRD30AQ9BXX3 1397 aa21.67■■□□□ 1.06
LINC00116-203ENST00000611969 SPATA31A6Q5VVP1 1343 aa21.67■■□□□ 1.06
LINC00116-203ENST00000611969 RPRD2Q5VT52 1461 aaKnown RBP21.66■■□□□ 1.06
LINC00116-203ENST00000611969 CHIC2Q9UKJ5 165 aa21.66■■□□□ 1.06
LINC00116-203ENST00000611969 MEX3CQ5U5Q3 659 aaKnown RBP21.65■■□□□ 1.06
LINC00116-203ENST00000611969 SLC52A1Q9NWF4 448 aa21.64■■□□□ 1.05
LINC00116-203ENST00000611969 ADGRL2O95490 1459 aa21.64■■□□□ 1.05
LINC00116-203ENST00000611969 ADAMTS13Q76LX8 1427 aa21.63■■□□□ 1.05
LINC00116-203ENST00000611969 ZNF772Q68DY9 489 aaPredicted RBP21.62■■□□□ 1.05
LINC00116-203ENST00000611969 NCOA3Q9Y6Q9 1424 aa21.62■■□□□ 1.05
LINC00116-203ENST00000611969 E9PCH4 1651 aa21.61■■□□□ 1.05
LINC00116-203ENST00000611969 PPP1R15AO75807 674 aaPredicted RBP21.61■■□□□ 1.05
LINC00116-203ENST00000611969 NHSL1Q5SYE7 1610 aa21.6■■□□□ 1.05
LINC00116-203ENST00000611969 CDK12Q9NYV4 1490 aaPredicted RBP21.59■■□□□ 1.05
LINC00116-203ENST00000611969 UNC13BO14795 1591 aa21.59■■□□□ 1.05
LINC00116-203ENST00000611969 C14orf37Q86TY3 774 aa21.59■■□□□ 1.05
LINC00116-203ENST00000611969 ASXL1Q8IXJ9 1541 aa21.57■■□□□ 1.04
LINC00116-203ENST00000611969 LOC105371045A0A1W2PR82 267 aa21.57■■□□□ 1.04
LINC00116-203ENST00000611969 XRN1Q8IZH2 1706 aaKnown RBP21.57■■□□□ 1.04
LINC00116-203ENST00000611969 TRPM2O94759 1503 aa21.56■■□□□ 1.04
LINC00116-203ENST00000611969 TBX22Q9Y458 520 aa21.56■■□□□ 1.04
LINC00116-203ENST00000611969 NUTM2DQ5VT03 806 aaPredicted RBP21.55■■□□□ 1.04
LINC00116-203ENST00000611969 NRXN3Q9Y4C0 1643 aa21.55■■□□□ 1.04
LINC00116-203ENST00000611969 PTPRUQ92729 1446 aa21.55■■□□□ 1.04
LINC00116-203ENST00000611969 ANKRD50Q9ULJ7 1429 aa21.55■■□□□ 1.04
LINC00116-203ENST00000611969 RXRBP28702 533 aa21.54■■□□□ 1.04
LINC00116-203ENST00000611969 CADPS2Q86UW7 1296 aa21.54■■□□□ 1.04
LINC00116-203ENST00000611969 RGS12O14924 1447 aa21.54■■□□□ 1.04
LINC00116-203ENST00000611969 NUTM2BA6NNL0 878 aaPredicted RBP21.53■■□□□ 1.04
LINC00116-203ENST00000611969 NUTM2EB1AL46 878 aaPredicted RBP21.53■■□□□ 1.04
LINC00116-203ENST00000611969 BRINP3Q76B58 766 aa21.53■■□□□ 1.04
LINC00116-203ENST00000611969 NUTM2AQ8IVF1 878 aaPredicted RBP21.53■■□□□ 1.04
LINC00116-203ENST00000611969 ATF3P18847 181 aa21.52■■□□□ 1.04
LINC00116-203ENST00000611969 C19orf44Q9H6X5 657 aa21.52■■□□□ 1.04
LINC00116-203ENST00000611969 AFF2P51816 1311 aa21.52■■□□□ 1.03
LINC00116-203ENST00000611969 PIK3R4Q99570 1358 aa21.51■■□□□ 1.03
LINC00116-203ENST00000611969 IQGAP3Q86VI3 1631 aa21.5■■□□□ 1.03
LINC00116-203ENST00000611969 DCCP43146 1447 aa21.49■■□□□ 1.03
LINC00116-203ENST00000611969 CHGAP10645 457 aaKnown RBP21.49■■□□□ 1.03
LINC00116-203ENST00000611969 NALCNQ8IZF0 1738 aa21.49■■□□□ 1.03
LINC00116-203ENST00000611969 SRCAPQ6ZRS2 3230 aa21.48■■□□□ 1.03
LINC00116-203ENST00000611969 MST1RQ04912 1400 aa21.48■■□□□ 1.03
LINC00116-203ENST00000611969 SETD5Q9C0A6 1442 aa21.48■■□□□ 1.03
LINC00116-203ENST00000611969 HDGFP51858 240 aaKnown RBP21.48■■□□□ 1.03
LINC00116-203ENST00000611969 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.47■■□□□ 1.03
LINC00116-203ENST00000611969 AMOTL2Q9Y2J4 779 aa21.45■■□□□ 1.02
LINC00116-203ENST00000611969 SETBP1Q9Y6X0 1596 aa21.44■■□□□ 1.02
LINC00116-203ENST00000611969 PNPLA6Q8IY17 1366 aa21.42■■□□□ 1.02
LINC00116-203ENST00000611969 APLP2Q06481 763 aa21.41■■□□□ 1.02
LINC00116-203ENST00000611969 C8orf37Q96NL8 207 aa21.41■■□□□ 1.02
LINC00116-203ENST00000611969 SPHKAPQ2M3C7 1700 aa21.41■■□□□ 1.02
LINC00116-203ENST00000611969 FAM50AQ14320 339 aaKnown RBP21.4■■□□□ 1.02
LINC00116-203ENST00000611969 DDX17Q92841 729 aaKnown RBP21.4■■□□□ 1.02
LINC00116-203ENST00000611969 LAMC1P11047 1609 aa21.38■■□□□ 1.01
LINC00116-203ENST00000611969 ADGRL3Q9HAR2 1447 aa21.38■■□□□ 1.01
LINC00116-203ENST00000611969 RBM6P78332 1123 aaKnown RBP21.36■■□□□ 1.01
LINC00116-203ENST00000611969 METP08581 1390 aa21.36■■□□□ 1.01
LINC00116-203ENST00000611969 QTRT2Q9H974 415 aaKnown RBP21.35■■□□□ 1.01
LINC00116-203ENST00000611969 LRRC59Q96AG4 307 aaKnown RBP21.34■■□□□ 1.01
LINC00116-203ENST00000611969 EP400Q96L91 3159 aa21.34■■□□□ 1.01
LINC00116-203ENST00000611969 NEXMIFQ5QGS0 1516 aa21.31■■□□□ 1
LINC00116-203ENST00000611969 ADAMTS2O95450 1211 aa21.3■■□□□ 1
LINC00116-203ENST00000611969 ATAD2Q6PL18 1390 aa21.3■■□□□ 1
LINC00116-203ENST00000611969 CLTCL1P53675 1640 aa21.29■■□□□ 1
LINC00116-203ENST00000611969 COL22A1Q8NFW1 1626 aaPredicted RBP21.29■■□□□ 1
LINC00116-203ENST00000611969 C1orf167Q5SNV9 1468 aa21.28■■□□□ 1
LINC00116-203ENST00000611969 MARF1Q9Y4F3 1742 aaKnown RBP21.28■■□□□ 1
LINC00116-203ENST00000611969 NUP155O75694 1391 aa21.27■■□□□ 1
LINC00116-203ENST00000611969 NGLY1Q96IV0 654 aa21.27■■□□□ 1
LINC00116-203ENST00000611969 ROCK1Q13464 1354 aa21.26■□□□□ 0.99
LINC00116-203ENST00000611969 ATRNO75882 1429 aa21.24■□□□□ 0.99
LINC00116-203ENST00000611969 KIF1BO60333 1816 aa21.22■□□□□ 0.99
LINC00116-203ENST00000611969 USP21Q9UK80 565 aa21.22■□□□□ 0.99
LINC00116-203ENST00000611969 PTCH1Q13635 1447 aa21.21■□□□□ 0.99
LINC00116-203ENST00000611969 ZNF326Q5BKZ1 582 aaKnown RBP21.21■□□□□ 0.99
LINC00116-203ENST00000611969 SOS2Q07890 1332 aaPredicted RBP21.21■□□□□ 0.99
LINC00116-203ENST00000611969 ORAI2Q96SN7 254 aa21.19■□□□□ 0.98
LINC00116-203ENST00000611969 MYOM2P54296 1465 aa21.19■□□□□ 0.98
LINC00116-203ENST00000611969 TRPC5Q9UL62 973 aaPredicted RBP21.18■□□□□ 0.98
LINC00116-203ENST00000611969 ROBO2Q9HCK4 1378 aa21.18■□□□□ 0.98
LINC00116-203ENST00000611969 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.17■□□□□ 0.98
LINC00116-203ENST00000611969 FNBP4Q8N3X1 1017 aaPredicted RBP21.16■□□□□ 0.98
LINC00116-203ENST00000611969 ZRANB1Q9UGI0 708 aa21.16■□□□□ 0.98
LINC00116-203ENST00000611969 BCL9LQ86UU0 1499 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms