RNA–Protein interactions for RNA: ENST00000611897.1

HMGB1P24-201, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 328 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-201ENST00000611897 SLC52A1Q9NWF4 448 aa20.6■□□□□ 0.89
HMGB1P24-201ENST00000611897 RPRD2Q5VT52 1461 aaKnown RBP20.6■□□□□ 0.89
HMGB1P24-201ENST00000611897 KCNA6P17658 529 aa20.59■□□□□ 0.89
HMGB1P24-201ENST00000611897 UNC13BO14795 1591 aa20.59■□□□□ 0.89
HMGB1P24-201ENST00000611897 ROBO1Q9Y6N7 1651 aa20.58■□□□□ 0.88
HMGB1P24-201ENST00000611897 ITGAEP38570 1179 aa20.57■□□□□ 0.88
HMGB1P24-201ENST00000611897 NWD1Q149M9 1564 aa20.57■□□□□ 0.88
HMGB1P24-201ENST00000611897 NKTRP30414 1462 aaKnown RBP20.56■□□□□ 0.88
HMGB1P24-201ENST00000611897 RIMS2Q9UQ26 1411 aa20.56■□□□□ 0.88
HMGB1P24-201ENST00000611897 E9PCH4 1651 aa20.55■□□□□ 0.88
HMGB1P24-201ENST00000611897 TMEM131LA2VDJ0 1609 aa20.54■□□□□ 0.88
HMGB1P24-201ENST00000611897 PPARGC1BQ86YN6 1023 aaKnown RBP20.54■□□□□ 0.88
HMGB1P24-201ENST00000611897 ZFYVE9O95405 1425 aa20.53■□□□□ 0.88
HMGB1P24-201ENST00000611897 NUTM2DQ5VT03 806 aaPredicted RBP20.53■□□□□ 0.88
HMGB1P24-201ENST00000611897 MSH6P52701 1360 aa20.53■□□□□ 0.88
HMGB1P24-201ENST00000611897 FAM135BQ49AJ0 1406 aa20.53■□□□□ 0.88
HMGB1P24-201ENST00000611897 PLEKHG1Q9ULL1 1385 aa20.52■□□□□ 0.88
HMGB1P24-201ENST00000611897 CHD2O14647 1828 aaKnown RBP20.5■□□□□ 0.87
HMGB1P24-201ENST00000611897 IQGAP3Q86VI3 1631 aa20.5■□□□□ 0.87
HMGB1P24-201ENST00000611897 C14orf37Q86TY3 774 aa20.49■□□□□ 0.87
HMGB1P24-201ENST00000611897 HDGFP51858 240 aaKnown RBP20.48■□□□□ 0.87
HMGB1P24-201ENST00000611897 ROCK1Q13464 1354 aa20.47■□□□□ 0.87
HMGB1P24-201ENST00000611897 PHLPP1O60346 1717 aa20.47■□□□□ 0.87
HMGB1P24-201ENST00000611897 NUP155O75694 1391 aa20.46■□□□□ 0.87
HMGB1P24-201ENST00000611897 RGS17Q9UGC6 210 aaPredicted RBP20.45■□□□□ 0.86
HMGB1P24-201ENST00000611897 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.44■□□□□ 0.86
HMGB1P24-201ENST00000611897 SLAIN2Q9P270 581 aa20.43■□□□□ 0.86
HMGB1P24-201ENST00000611897 ADAMTS13Q76LX8 1427 aa20.41■□□□□ 0.86
HMGB1P24-201ENST00000611897 DIP2AQ14689 1571 aa20.41■□□□□ 0.86
HMGB1P24-201ENST00000611897 SPHKAPQ2M3C7 1700 aa20.4■□□□□ 0.86
HMGB1P24-201ENST00000611897 TBX22Q9Y458 520 aa20.4■□□□□ 0.86
HMGB1P24-201ENST00000611897 TRPM2O94759 1503 aa20.38■□□□□ 0.85
HMGB1P24-201ENST00000611897 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.38■□□□□ 0.85
HMGB1P24-201ENST00000611897 COL16A1Q07092 1604 aaPredicted RBP20.36■□□□□ 0.85
HMGB1P24-201ENST00000611897 ZNF326Q5BKZ1 582 aaKnown RBP20.36■□□□□ 0.85
HMGB1P24-201ENST00000611897 POTEAQ6S8J7 498 aa20.36■□□□□ 0.85
HMGB1P24-201ENST00000611897 JCADQ9P266 1359 aa20.35■□□□□ 0.85
HMGB1P24-201ENST00000611897 ATF3P18847 181 aa20.35■□□□□ 0.85
HMGB1P24-201ENST00000611897 AMOTL2Q9Y2J4 779 aa20.33■□□□□ 0.85
HMGB1P24-201ENST00000611897 SETD1AO15047 1707 aaKnown RBP20.33■□□□□ 0.84
HMGB1P24-201ENST00000611897 PIK3R4Q99570 1358 aa20.33■□□□□ 0.84
HMGB1P24-201ENST00000611897 CADPS2Q86UW7 1296 aa20.32■□□□□ 0.84
HMGB1P24-201ENST00000611897 PTPRUQ92729 1446 aa20.32■□□□□ 0.84
HMGB1P24-201ENST00000611897 NCOA3Q9Y6Q9 1424 aa20.31■□□□□ 0.84
HMGB1P24-201ENST00000611897 NRXN3Q9Y4C0 1643 aa20.31■□□□□ 0.84
HMGB1P24-201ENST00000611897 MEX3CQ5U5Q3 659 aaKnown RBP20.3■□□□□ 0.84
HMGB1P24-201ENST00000611897 C19orf44Q9H6X5 657 aa20.3■□□□□ 0.84
HMGB1P24-201ENST00000611897 CLTCL1P53675 1640 aa20.29■□□□□ 0.84
HMGB1P24-201ENST00000611897 XRN1Q8IZH2 1706 aaKnown RBP20.28■□□□□ 0.84
HMGB1P24-201ENST00000611897 LRP6O75581 1613 aa20.27■□□□□ 0.84
HMGB1P24-201ENST00000611897 AHDC1Q5TGY3 1603 aaPredicted RBP20.27■□□□□ 0.84
HMGB1P24-201ENST00000611897 SETBP1Q9Y6X0 1596 aa20.27■□□□□ 0.84
HMGB1P24-201ENST00000611897 KIF1BO60333 1816 aa20.25■□□□□ 0.83
HMGB1P24-201ENST00000611897 SHPRHQ149N8 1683 aa20.24■□□□□ 0.83
HMGB1P24-201ENST00000611897 METP08581 1390 aa20.23■□□□□ 0.83
HMGB1P24-201ENST00000611897 NUTM2BA6NNL0 878 aaPredicted RBP20.23■□□□□ 0.83
HMGB1P24-201ENST00000611897 NUTM2EB1AL46 878 aaPredicted RBP20.23■□□□□ 0.83
HMGB1P24-201ENST00000611897 BRINP3Q76B58 766 aa20.23■□□□□ 0.83
HMGB1P24-201ENST00000611897 NUTM2AQ8IVF1 878 aaPredicted RBP20.23■□□□□ 0.83
HMGB1P24-201ENST00000611897 SPATA31A6Q5VVP1 1343 aa20.23■□□□□ 0.83
HMGB1P24-201ENST00000611897 NEXMIFQ5QGS0 1516 aa20.22■□□□□ 0.83
HMGB1P24-201ENST00000611897 TRIM52Q96A61 297 aa20.22■□□□□ 0.83
HMGB1P24-201ENST00000611897 ASXL1Q8IXJ9 1541 aa20.22■□□□□ 0.83
HMGB1P24-201ENST00000611897 DCCP43146 1447 aa20.21■□□□□ 0.83
HMGB1P24-201ENST00000611897 NAIPQ13075 1403 aa20.21■□□□□ 0.83
HMGB1P24-201ENST00000611897 RRBP1Q9P2E9 1410 aaKnown RBP20.21■□□□□ 0.83
HMGB1P24-201ENST00000611897 NALCNQ8IZF0 1738 aa20.2■□□□□ 0.82
HMGB1P24-201ENST00000611897 MST1RQ04912 1400 aa20.19■□□□□ 0.82
HMGB1P24-201ENST00000611897 ADGRL3Q9HAR2 1447 aa20.17■□□□□ 0.82
HMGB1P24-201ENST00000611897 NHSL1Q5SYE7 1610 aa20.16■□□□□ 0.82
HMGB1P24-201ENST00000611897 DDX17Q92841 729 aaKnown RBP20.16■□□□□ 0.82
HMGB1P24-201ENST00000611897 ZNF772Q68DY9 489 aaPredicted RBP20.15■□□□□ 0.82
HMGB1P24-201ENST00000611897 SLC4A1APQ9BWU0 796 aaKnown RBP20.13■□□□□ 0.81
HMGB1P24-201ENST00000611897 HFM1A2PYH4 1435 aa20.11■□□□□ 0.81
HMGB1P24-201ENST00000611897 SETD5Q9C0A6 1442 aa20.1■□□□□ 0.81
HMGB1P24-201ENST00000611897 AFF2P51816 1311 aa20.09■□□□□ 0.81
HMGB1P24-201ENST00000611897 PPLO60437 1756 aa20.09■□□□□ 0.81
HMGB1P24-201ENST00000611897 VGFO15240 615 aaPredicted RBP20.08■□□□□ 0.81
HMGB1P24-201ENST00000611897 ROBO2Q9HCK4 1378 aa20.08■□□□□ 0.8
HMGB1P24-201ENST00000611897 C1orf167Q5SNV9 1468 aa20.07■□□□□ 0.8
HMGB1P24-201ENST00000611897 FOXD1Q16676 465 aa20.07■□□□□ 0.8
HMGB1P24-201ENST00000611897 LRRC59Q96AG4 307 aaKnown RBP20.07■□□□□ 0.8
HMGB1P24-201ENST00000611897 C8orf37Q96NL8 207 aa20.07■□□□□ 0.8
HMGB1P24-201ENST00000611897 PTCH1Q13635 1447 aa20.07■□□□□ 0.8
HMGB1P24-201ENST00000611897 PNPLA6Q8IY17 1366 aa20.07■□□□□ 0.8
HMGB1P24-201ENST00000611897 RXRBP28702 533 aa20.06■□□□□ 0.8
HMGB1P24-201ENST00000611897 ADAMTS2O95450 1211 aa20.03■□□□□ 0.8
HMGB1P24-201ENST00000611897 ORAI2Q96SN7 254 aa20.03■□□□□ 0.8
HMGB1P24-201ENST00000611897 RPGRIP1LQ68CZ1 1315 aa20.02■□□□□ 0.79
HMGB1P24-201ENST00000611897 RGL3Q3MIN7 710 aa20■□□□□ 0.79
HMGB1P24-201ENST00000611897 UPF1Q92900 1129 aaKnown RBP eCLIP20■□□□□ 0.79
HMGB1P24-201ENST00000611897 CCDC144AA2RUR9 1427 aa20■□□□□ 0.79
HMGB1P24-201ENST00000611897 NGLY1Q96IV0 654 aa19.98■□□□□ 0.79
HMGB1P24-201ENST00000611897 STK26Q9P289 416 aa19.98■□□□□ 0.79
HMGB1P24-201ENST00000611897 ADGRF5Q8IZF2 1346 aa19.97■□□□□ 0.79
HMGB1P24-201ENST00000611897 RGS12O14924 1447 aa19.96■□□□□ 0.79
HMGB1P24-201ENST00000611897 LAMC1P11047 1609 aa19.96■□□□□ 0.79
HMGB1P24-201ENST00000611897 NUTM2FA1L443 756 aa19.96■□□□□ 0.79
HMGB1P24-201ENST00000611897 QTRT2Q9H974 415 aaKnown RBP19.96■□□□□ 0.79
HMGB1P24-201ENST00000611897 CDK12Q9NYV4 1490 aaPredicted RBP19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms